RNA–Protein interactions for RNA: ENST00000497269.5

MSH5-219, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-219ENST00000497269 HHIPQ96QV1 700 aa9.01□□□□□ -0.97
MSH5-219ENST00000497269 SALL4Q9UJQ4 1053 aa9.01□□□□□ -0.97
MSH5-219ENST00000497269 ANKRD50Q9ULJ7 1429 aa9□□□□□ -0.97
MSH5-219ENST00000497269 SNRPNP63162 240 aaKnown RBP9□□□□□ -0.97
MSH5-219ENST00000497269 FMR1Q06787 632 aaKnown RBP eCLIP9□□□□□ -0.97
MSH5-219ENST00000497269 NPAS4Q8IUM7 802 aa9□□□□□ -0.97
MSH5-219ENST00000497269 CCDC74AQ96AQ1 378 aa9□□□□□ -0.97
MSH5-219ENST00000497269 OSMRQ99650 979 aa9□□□□□ -0.97
MSH5-219ENST00000497269 LACRTQ9GZZ8 138 aa9□□□□□ -0.97
MSH5-219ENST00000497269 GADD45BO75293 160 aaPredicted RBP8.99□□□□□ -0.97
MSH5-219ENST00000497269 KIF4AO95239 1232 aa8.99□□□□□ -0.97
MSH5-219ENST00000497269 EPS8L3Q8TE67 593 aaKnown RBP8.99□□□□□ -0.97
MSH5-219ENST00000497269 ZKSCAN3Q9BRR0 538 aa8.99□□□□□ -0.97
MSH5-219ENST00000497269 ADAMTS8Q9UP79 889 aa8.99□□□□□ -0.97
MSH5-219ENST00000497269 TRIM33Q9UPN9 1127 aa8.99□□□□□ -0.97
MSH5-219ENST00000497269 NOS1P29475 1434 aa8.98□□□□□ -0.97
MSH5-219ENST00000497269 RIMS2Q9UQ26 1411 aa8.98□□□□□ -0.97
MSH5-219ENST00000497269 TET3O43151 1660 aa8.98□□□□□ -0.97
MSH5-219ENST00000497269 EDN3P14138 238 aa8.98□□□□□ -0.97
MSH5-219ENST00000497269 CDC25BP30305 580 aa8.98□□□□□ -0.97
MSH5-219ENST00000497269 TAGLNQ01995 201 aaKnown RBP8.98□□□□□ -0.97
MSH5-219ENST00000497269 CEP120Q8N960 986 aa8.98□□□□□ -0.97
MSH5-219ENST00000497269 SLC52A1Q9NWF4 448 aa8.98□□□□□ -0.97
MSH5-219ENST00000497269 GCC2Q8IWJ2 1684 aa8.97□□□□□ -0.97
MSH5-219ENST00000497269 ROBO1Q9Y6N7 1651 aa8.97□□□□□ -0.97
MSH5-219ENST00000497269 ADGRB3O60242 1522 aa8.97□□□□□ -0.97
MSH5-219ENST00000497269 LILRB5O75023 590 aa8.97□□□□□ -0.97
MSH5-219ENST00000497269 LDHBP07195 334 aaKnown RBP8.97□□□□□ -0.97
MSH5-219ENST00000497269 HOXD8P13378 290 aaPredicted RBP8.97□□□□□ -0.97
MSH5-219ENST00000497269 ATP2B2Q01814 1243 aa8.97□□□□□ -0.97
MSH5-219ENST00000497269 ENOX2Q16206 610 aaKnown RBP8.97□□□□□ -0.97
MSH5-219ENST00000497269 EAPPQ56P03 285 aaPredicted RBP8.97□□□□□ -0.97
MSH5-219ENST00000497269 PEAR1Q5VY43 1037 aaPredicted RBP8.97□□□□□ -0.97
MSH5-219ENST00000497269 KANK3Q6NY19 840 aa8.97□□□□□ -0.97
MSH5-219ENST00000497269 C20orf204Q6ZNR8 217 aa8.97□□□□□ -0.97
MSH5-219ENST00000497269 GALNT12Q8IXK2 581 aa8.97□□□□□ -0.97
MSH5-219ENST00000497269 ASAP3Q8TDY4 903 aa8.97□□□□□ -0.97
MSH5-219ENST00000497269 DNAJC25Q9H1X3 360 aa8.97□□□□□ -0.97
MSH5-219ENST00000497269 LRRC4BQ9NT99 713 aa8.97□□□□□ -0.97
MSH5-219ENST00000497269 CNTNAP5Q8WYK1 1306 aa8.97□□□□□ -0.97
MSH5-219ENST00000497269 LMTK2Q8IWU2 1503 aa8.96□□□□□ -0.97
MSH5-219ENST00000497269 METTL12A8MUP2 240 aa8.96□□□□□ -0.98
MSH5-219ENST00000497269 SMNDC1O75940 238 aaKnown RBP eCLIP8.96□□□□□ -0.98
MSH5-219ENST00000497269 DGKGP49619 791 aa8.96□□□□□ -0.98
MSH5-219ENST00000497269 ZNF326Q5BKZ1 582 aaKnown RBP8.96□□□□□ -0.98
MSH5-219ENST00000497269 PBX4Q9BYU1 374 aa8.96□□□□□ -0.98
MSH5-219ENST00000497269 EHD4Q9H223 541 aa8.96□□□□□ -0.98
MSH5-219ENST00000497269 RNF19AQ9NV58 838 aa8.96□□□□□ -0.98
MSH5-219ENST00000497269 DZANK1Q9NVP4 752 aa8.96□□□□□ -0.98
MSH5-219ENST00000497269 NUP155O75694 1391 aa8.96□□□□□ -0.98
MSH5-219ENST00000497269 MSH6P52701 1360 aa8.96□□□□□ -0.98
MSH5-219ENST00000497269 FAM135BQ49AJ0 1406 aa8.96□□□□□ -0.98
MSH5-219ENST00000497269 ADGRL2O95490 1459 aa8.96□□□□□ -0.98
MSH5-219ENST00000497269 A0A1W2PP55 124 aa8.95□□□□□ -0.98
MSH5-219ENST00000497269 HOXB4P17483 251 aaPredicted RBP8.95□□□□□ -0.98
MSH5-219ENST00000497269 AFF1P51825 1210 aaKnown RBP8.95□□□□□ -0.98
MSH5-219ENST00000497269 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.95□□□□□ -0.98
MSH5-219ENST00000497269 ADAMTSL4Q6UY14 1074 aa8.95□□□□□ -0.98
MSH5-219ENST00000497269 FOXD4L4Q8WXT5 416 aaPredicted RBP8.95□□□□□ -0.98
MSH5-219ENST00000497269 NLRP2Q9NX02 1062 aa8.95□□□□□ -0.98
MSH5-219ENST00000497269 FRRS1LQ9P0K9 344 aa8.95□□□□□ -0.98
MSH5-219ENST00000497269 CCDC9Q9Y3X0 531 aaKnown RBP8.95□□□□□ -0.98
MSH5-219ENST00000497269 MEX3CQ5U5Q3 659 aaKnown RBP8.94□□□□□ -0.98
MSH5-219ENST00000497269 TXNDC11Q6PKC3 985 aa8.94□□□□□ -0.98
MSH5-219ENST00000497269 PODNQ7Z5L7 613 aa8.94□□□□□ -0.98
MSH5-219ENST00000497269 DDX17Q92841 729 aaKnown RBP8.94□□□□□ -0.98
MSH5-219ENST00000497269 POP1Q99575 1024 aaKnown RBP8.94□□□□□ -0.98
MSH5-219ENST00000497269 BCL2L13Q9BXK5 485 aa8.94□□□□□ -0.98
MSH5-219ENST00000497269 LIN7BQ9HAP6 207 aa8.94□□□□□ -0.98
MSH5-219ENST00000497269 SH2B1Q9NRF2 756 aaPredicted RBP8.94□□□□□ -0.98
MSH5-219ENST00000497269 PLEKHG1Q9ULL1 1385 aa8.94□□□□□ -0.98
MSH5-219ENST00000497269 ZFYVE9O95405 1425 aa8.94□□□□□ -0.98
MSH5-219ENST00000497269 TMEM131LA2VDJ0 1609 aa8.94□□□□□ -0.98
MSH5-219ENST00000497269 E9PCH4 1651 aa8.94□□□□□ -0.98
MSH5-219ENST00000497269 PHLPP1O60346 1717 aa8.94□□□□□ -0.98
MSH5-219ENST00000497269 PDE2AO00408 941 aaPredicted RBP8.93□□□□□ -0.98
MSH5-219ENST00000497269 ATF3P18847 181 aa8.93□□□□□ -0.98
MSH5-219ENST00000497269 DMRTC2Q8IXT2 367 aaPredicted RBP8.93□□□□□ -0.98
MSH5-219ENST00000497269 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.93□□□□□ -0.98
MSH5-219ENST00000497269 MKL2Q9ULH7 1088 aa8.93□□□□□ -0.98
MSH5-219ENST00000497269 TBX22Q9Y458 520 aa8.93□□□□□ -0.98
MSH5-219ENST00000497269 CHD2O14647 1828 aaKnown RBP8.92□□□□□ -0.98
MSH5-219ENST00000497269 FAM181BA6NEQ2 426 aa8.92□□□□□ -0.98
MSH5-219ENST00000497269 FAM229AH3BQW9 127 aa8.92□□□□□ -0.98
MSH5-219ENST00000497269 NFKBIEO00221 500 aa8.92□□□□□ -0.98
MSH5-219ENST00000497269 GRIK5Q16478 980 aa8.92□□□□□ -0.98
MSH5-219ENST00000497269 TRAPPC3LQ5T215 181 aa8.92□□□□□ -0.98
MSH5-219ENST00000497269 IL22RA1Q8N6P7 574 aa8.92□□□□□ -0.98
MSH5-219ENST00000497269 GIPC2Q8TF65 315 aa8.92□□□□□ -0.98
MSH5-219ENST00000497269 FAM161BQ96MY7 647 aa8.92□□□□□ -0.98
MSH5-219ENST00000497269 DUSP9Q99956 384 aaKnown RBP8.92□□□□□ -0.98
MSH5-219ENST00000497269 SUV39H2Q9H5I1 410 aa8.92□□□□□ -0.98
MSH5-219ENST00000497269 PTPRUQ92729 1446 aa8.91□□□□□ -0.98
MSH5-219ENST00000497269 ALG1LQ6GMV1 187 aa8.91□□□□□ -0.98
MSH5-219ENST00000497269 WFDC8Q8IUA0 241 aa8.91□□□□□ -0.98
MSH5-219ENST00000497269 TRIM11Q96F44 468 aa8.91□□□□□ -0.98
MSH5-219ENST00000497269 PLVAPQ9BX97 442 aa8.91□□□□□ -0.98
MSH5-219ENST00000497269 SETD1AO15047 1707 aaKnown RBP8.91□□□□□ -0.98
MSH5-219ENST00000497269 KDM5AP29375 1690 aaKnown RBP8.91□□□□□ -0.98
MSH5-219ENST00000497269 ADAMTS13Q76LX8 1427 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms