RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 ZSWIM4Q9H7M6 989 aa14.81□□□□□ -0.04
VEGFA-215ENST00000497139 GNL3LQ9NVN8 582 aaKnown RBP14.81□□□□□ -0.04
VEGFA-215ENST00000497139 TTF2Q9UNY4 1162 aaKnown RBP14.81□□□□□ -0.04
VEGFA-215ENST00000497139 KDM6AO15550 1401 aaPredicted RBP14.81□□□□□ -0.04
VEGFA-215ENST00000497139 LIG3P49916 1009 aa14.81□□□□□ -0.04
VEGFA-215ENST00000497139 PDILTQ8N807 584 aa14.81□□□□□ -0.04
VEGFA-215ENST00000497139 CCDC148Q8NFR7 591 aa14.81□□□□□ -0.04
VEGFA-215ENST00000497139 SUGCTQ9HAC7 445 aa14.81□□□□□ -0.04
VEGFA-215ENST00000497139 GNAT3A8MTJ3 354 aa14.8□□□□□ -0.04
VEGFA-215ENST00000497139 ANKRD65E5RJM6 399 aa14.8□□□□□ -0.04
VEGFA-215ENST00000497139 PHACTR2O75167 634 aa14.8□□□□□ -0.04
VEGFA-215ENST00000497139 TICAM2Q86XR7 235 aa14.8□□□□□ -0.04
VEGFA-215ENST00000497139 FBXL16Q8N461 479 aa14.8□□□□□ -0.04
VEGFA-215ENST00000497139 FAM76AQ8TAV0 307 aa14.8□□□□□ -0.04
VEGFA-215ENST00000497139 NAPGQ99747 312 aaPredicted RBP14.8□□□□□ -0.04
VEGFA-215ENST00000497139 FANCLQ9NW38 375 aa14.8□□□□□ -0.04
VEGFA-215ENST00000497139 DACH1Q9UI36 760 aa14.8□□□□□ -0.04
VEGFA-215ENST00000497139 HPCAL4Q9UM19 191 aa14.8□□□□□ -0.04
VEGFA-215ENST00000497139 METP08581 1390 aa14.8□□□□□ -0.04
VEGFA-215ENST00000497139 DIP2AQ14689 1571 aa14.8□□□□□ -0.04
VEGFA-215ENST00000497139 TARSL2A2RTX5 802 aaKnown RBP14.8□□□□□ -0.04
VEGFA-215ENST00000497139 GOLGA8FQ08AF8 430 aa14.8□□□□□ -0.04
VEGFA-215ENST00000497139 GOLGA8DPQ0D2H9 430 aa14.8□□□□□ -0.04
VEGFA-215ENST00000497139 PPFIA1Q13136 1202 aa14.8□□□□□ -0.04
VEGFA-215ENST00000497139 NEDD9Q14511 834 aa14.8□□□□□ -0.04
VEGFA-215ENST00000497139 TAF7Q15545 349 aaPredicted RBP14.8□□□□□ -0.04
VEGFA-215ENST00000497139 RASGRP2Q7LDG7 609 aa14.8□□□□□ -0.04
VEGFA-215ENST00000497139 AMOTL1Q8IY63 956 aa14.8□□□□□ -0.04
VEGFA-215ENST00000497139 HPSEQ9Y251 543 aa14.8□□□□□ -0.04
VEGFA-215ENST00000497139 CLIC4Q9Y696 253 aa14.8□□□□□ -0.04
VEGFA-215ENST00000497139 AKR1B15C9JRZ8 316 aaPredicted RBP14.79□□□□□ -0.04
VEGFA-215ENST00000497139 KIF3CO14782 793 aa14.79□□□□□ -0.04
VEGFA-215ENST00000497139 RHOXF2BP0C7M4 288 aa14.79□□□□□ -0.04
VEGFA-215ENST00000497139 SYKP43405 635 aa14.79□□□□□ -0.04
VEGFA-215ENST00000497139 HSP90AB2PQ58FF8 381 aa14.79□□□□□ -0.04
VEGFA-215ENST00000497139 MYSM1Q5VVJ2 828 aa14.79□□□□□ -0.04
VEGFA-215ENST00000497139 MAP3K15Q6ZN16 1313 aa14.79□□□□□ -0.04
VEGFA-215ENST00000497139 IGSF1Q8N6C5 1336 aa14.79□□□□□ -0.04
VEGFA-215ENST00000497139 JMYQ8N9B5 988 aa14.79□□□□□ -0.04
VEGFA-215ENST00000497139 IGSF22Q8N9C0 903 aa14.79□□□□□ -0.04
VEGFA-215ENST00000497139 GIMAP7Q8NHV1 300 aa14.79□□□□□ -0.04
VEGFA-215ENST00000497139 RHOXF2Q9BQY4 288 aa14.79□□□□□ -0.04
VEGFA-215ENST00000497139 PHAXQ9H814 394 aaKnown RBP14.79□□□□□ -0.04
VEGFA-215ENST00000497139 CCDC189A1A4V9 331 aa14.79□□□□□ -0.04
VEGFA-215ENST00000497139 PPP1R12AO14974 1030 aaPredicted RBP14.79□□□□□ -0.04
VEGFA-215ENST00000497139 ZNF18P17022 549 aa14.79□□□□□ -0.04
VEGFA-215ENST00000497139 GPTP24298 496 aa14.79□□□□□ -0.04
VEGFA-215ENST00000497139 HDGFP51858 240 aaKnown RBP14.79□□□□□ -0.04
VEGFA-215ENST00000497139 WWC2Q6AWC2 1192 aa14.79□□□□□ -0.04
VEGFA-215ENST00000497139 SYNE3Q6ZMZ3 975 aa14.79□□□□□ -0.04
VEGFA-215ENST00000497139 B4GALNT4Q76KP1 1039 aa14.79□□□□□ -0.04
VEGFA-215ENST00000497139 ANKRD24Q8TF21 1146 aa14.79□□□□□ -0.04
VEGFA-215ENST00000497139 NECTIN2Q92692 538 aa14.79□□□□□ -0.04
VEGFA-215ENST00000497139 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.79□□□□□ -0.04
VEGFA-215ENST00000497139 FSBPO95073 299 aa14.79□□□□□ -0.04
VEGFA-215ENST00000497139 CYP21A2P08686 494 aa14.79□□□□□ -0.04
VEGFA-215ENST00000497139 EXOSC10Q01780 885 aaKnown RBP14.79□□□□□ -0.04
VEGFA-215ENST00000497139 ANO1Q5XXA6 986 aa14.79□□□□□ -0.04
VEGFA-215ENST00000497139 COG1Q8WTW3 980 aa14.79□□□□□ -0.04
VEGFA-215ENST00000497139 CCDC51Q96ER9 411 aa14.79□□□□□ -0.04
VEGFA-215ENST00000497139 RPGRIP1Q96KN7 1286 aa14.79□□□□□ -0.04
VEGFA-215ENST00000497139 RAI14Q9P0K7 980 aa14.79□□□□□ -0.04
VEGFA-215ENST00000497139 ANKARQ7Z5J8 1434 aa14.78□□□□□ -0.04
VEGFA-215ENST00000497139 PPP6R2O75170 966 aa14.78□□□□□ -0.04
VEGFA-215ENST00000497139 CCT5P48643 541 aa14.78□□□□□ -0.04
VEGFA-215ENST00000497139 IRAK1P51617 712 aa14.78□□□□□ -0.04
VEGFA-215ENST00000497139 STIM1Q13586 685 aa14.78□□□□□ -0.04
VEGFA-215ENST00000497139 PLEKHO1Q53GL0 409 aaPredicted RBP14.78□□□□□ -0.04
VEGFA-215ENST00000497139 ZNF569Q5MCW4 686 aa14.78□□□□□ -0.04
VEGFA-215ENST00000497139 TBC1D22AQ8WUA7 517 aa14.78□□□□□ -0.04
VEGFA-215ENST00000497139 EAF2Q96CJ1 260 aaPredicted RBP14.78□□□□□ -0.04
VEGFA-215ENST00000497139 DESI2Q9BSY9 194 aa14.78□□□□□ -0.04
VEGFA-215ENST00000497139 HOOK1Q9UJC3 728 aaKnown RBP14.78□□□□□ -0.04
VEGFA-215ENST00000497139 FLT4P35916 1363 aa14.78□□□□□ -0.04
VEGFA-215ENST00000497139 ZC3H4Q9UPT8 1303 aaKnown RBP14.78□□□□□ -0.04
VEGFA-215ENST00000497139 ERCC3P19447 782 aa14.78□□□□□ -0.04
VEGFA-215ENST00000497139 FECHP22830 423 aa14.78□□□□□ -0.04
VEGFA-215ENST00000497139 ADKP55263 362 aaKnown RBP14.78□□□□□ -0.04
VEGFA-215ENST00000497139 G3BP1Q13283 466 aaKnown RBP eCLIP14.78□□□□□ -0.04
VEGFA-215ENST00000497139 HSP90AB3PQ58FF7 597 aa14.78□□□□□ -0.04
VEGFA-215ENST00000497139 ENOX1Q8TC92 643 aaKnown RBP14.78□□□□□ -0.04
VEGFA-215ENST00000497139 XAGE2Q96GT9 111 aa14.78□□□□□ -0.04
VEGFA-215ENST00000497139 PLEKHA4Q9H4M7 779 aa14.78□□□□□ -0.04
VEGFA-215ENST00000497139 RBM28Q9NW13 759 aaKnown RBP14.78□□□□□ -0.04
VEGFA-215ENST00000497139 CHUKO15111 745 aa14.77□□□□□ -0.04
VEGFA-215ENST00000497139 SLC39A14Q15043 492 aa14.77□□□□□ -0.04
VEGFA-215ENST00000497139 NUTM2AQ8IVF1 878 aaPredicted RBP14.77□□□□□ -0.04
VEGFA-215ENST00000497139 ESF1Q9H501 851 aaKnown RBP14.77□□□□□ -0.04
VEGFA-215ENST00000497139 LZTFL1Q9NQ48 299 aa14.77□□□□□ -0.04
VEGFA-215ENST00000497139 EIF3HO15372 352 aaKnown RBP eCLIP14.77□□□□□ -0.055e-7■■■□□ 17.2
VEGFA-215ENST00000497139 FOSBP53539 338 aa14.77□□□□□ -0.05
VEGFA-215ENST00000497139 USP14P54578 494 aa14.77□□□□□ -0.05
VEGFA-215ENST00000497139 CLIC6Q96NY7 704 aa14.77□□□□□ -0.05
VEGFA-215ENST00000497139 COL15A1P39059 1388 aa14.76□□□□□ -0.05
VEGFA-215ENST00000497139 TNRQ92752 1358 aa14.76□□□□□ -0.05
VEGFA-215ENST00000497139 SASH1O94885 1247 aa14.76□□□□□ -0.05
VEGFA-215ENST00000497139 PDIA3P30101 505 aaKnown RBP14.76□□□□□ -0.05
VEGFA-215ENST00000497139 RDXP35241 583 aaKnown RBP14.76□□□□□ -0.05
VEGFA-215ENST00000497139 ARHGAP25P42331 645 aa14.76□□□□□ -0.05
VEGFA-215ENST00000497139 FBXW10Q5XX13 1052 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms