RNA–Protein interactions for RNA: ENST00000497089.1

HOXA9-206, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 1,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-206ENST00000497089 CLEC4GQ6UXB4 293 aa8.38□□□□□ -1.07
HOXA9-206ENST00000497089 NBPF15Q8N660 670 aa8.38□□□□□ -1.07
HOXA9-206ENST00000497089 CYLDQ9NQC7 956 aa8.38□□□□□ -1.07
HOXA9-206ENST00000497089 BABAM1Q9NWV8 329 aa8.38□□□□□ -1.07
HOXA9-206ENST00000497089 BCS1LQ9Y276 419 aa8.38□□□□□ -1.07
HOXA9-206ENST00000497089 ANKRD31Q8N7Z5 1873 aa8.38□□□□□ -1.07
HOXA9-206ENST00000497089 CHRNA5P30532 468 aa8.37□□□□□ -1.07
HOXA9-206ENST00000497089 SCTRP47872 440 aa8.37□□□□□ -1.07
HOXA9-206ENST00000497089 DALRD3Q5D0E6 543 aaKnown RBP8.37□□□□□ -1.07
HOXA9-206ENST00000497089 TBC1D9BQ66K14 1250 aa8.37□□□□□ -1.07
HOXA9-206ENST00000497089 CCDC102BQ68D86 513 aa8.37□□□□□ -1.07
HOXA9-206ENST00000497089 CC2D2BQ6DHV5 1058 aa8.37□□□□□ -1.07
HOXA9-206ENST00000497089 Q6ZNB5 142 aa8.37□□□□□ -1.07
HOXA9-206ENST00000497089 Q6ZVU0 165 aa8.37□□□□□ -1.07
HOXA9-206ENST00000497089 MIS18AQ9NYP9 233 aa8.37□□□□□ -1.07
HOXA9-206ENST00000497089 WWC3Q9ULE0 1092 aa8.37□□□□□ -1.07
HOXA9-206ENST00000497089 AXIN1O15169 862 aa8.36□□□□□ -1.07
HOXA9-206ENST00000497089 ADD1P35611 737 aaKnown RBP8.36□□□□□ -1.07
HOXA9-206ENST00000497089 TMPOP42166 694 aaKnown RBP8.36□□□□□ -1.07
HOXA9-206ENST00000497089 SEC13P55735 322 aa8.36□□□□□ -1.07
HOXA9-206ENST00000497089 RIPK4P57078 832 aa8.36□□□□□ -1.07
HOXA9-206ENST00000497089 LMOD3Q0VAK6 560 aa8.36□□□□□ -1.07
HOXA9-206ENST00000497089 CBLBQ13191 982 aa8.36□□□□□ -1.07
HOXA9-206ENST00000497089 SIX5Q8N196 739 aa8.36□□□□□ -1.07
HOXA9-206ENST00000497089 THUMPD2Q9BTF0 503 aaKnown RBP8.36□□□□□ -1.07
HOXA9-206ENST00000497089 BRIP1Q9BX63 1249 aa8.36□□□□□ -1.07
HOXA9-206ENST00000497089 AAASQ9NRG9 546 aa8.36□□□□□ -1.07
HOXA9-206ENST00000497089 ERBB4Q15303 1308 aa8.36□□□□□ -1.07
HOXA9-206ENST00000497089 ZBTB7BO15156 539 aaPredicted RBP8.35□□□□□ -1.07
HOXA9-206ENST00000497089 ST8SIA5O15466 376 aa8.35□□□□□ -1.07
HOXA9-206ENST00000497089 SBF1O95248 1867 aa8.35□□□□□ -1.07
HOXA9-206ENST00000497089 C1QTNF8P60827 252 aa8.35□□□□□ -1.07
HOXA9-206ENST00000497089 PRR5LQ6MZQ0 368 aa8.35□□□□□ -1.07
HOXA9-206ENST00000497089 BICDL1Q6ZP65 573 aa8.35□□□□□ -1.07
HOXA9-206ENST00000497089 MEIOBQ8N635 442 aa8.35□□□□□ -1.07
HOXA9-206ENST00000497089 TPCN2Q8NHX9 752 aa8.35□□□□□ -1.07
HOXA9-206ENST00000497089 SETDB2Q96T68 719 aa8.35□□□□□ -1.07
HOXA9-206ENST00000497089 ZNF652Q9Y2D9 606 aa8.35□□□□□ -1.07
HOXA9-206ENST00000497089 PCDHGA11Q9Y5H2 935 aa8.35□□□□□ -1.07
HOXA9-206ENST00000497089 COL11A2P13942 1736 aaPredicted RBP8.35□□□□□ -1.07
HOXA9-206ENST00000497089 KLRG2A4D1S0 409 aaPredicted RBP8.35□□□□□ -1.07
HOXA9-206ENST00000497089 H0YIN7 160 aa8.35□□□□□ -1.07
HOXA9-206ENST00000497089 PDE6BP35913 854 aa8.35□□□□□ -1.07
HOXA9-206ENST00000497089 PIP4K2AP48426 406 aaPredicted RBP8.35□□□□□ -1.07
HOXA9-206ENST00000497089 SWI5Q1ZZU3 235 aa8.35□□□□□ -1.07
HOXA9-206ENST00000497089 ARHGAP27Q6ZUM4 889 aa8.35□□□□□ -1.07
HOXA9-206ENST00000497089 TTLL6Q8N841 843 aa8.35□□□□□ -1.07
HOXA9-206ENST00000497089 RUNDC1Q96C34 613 aa8.35□□□□□ -1.07
HOXA9-206ENST00000497089 ADAMTS8Q9UP79 889 aa8.35□□□□□ -1.07
HOXA9-206ENST00000497089 ARFGEF2Q9Y6D5 1785 aa8.34□□□□□ -1.07
HOXA9-206ENST00000497089 NUP98P52948 1817 aa8.34□□□□□ -1.07
HOXA9-206ENST00000497089 ERVV-1B6SEH8 477 aa8.34□□□□□ -1.07
HOXA9-206ENST00000497089 CHL1O00533 1208 aa8.34□□□□□ -1.07
HOXA9-206ENST00000497089 LCE2BO14633 110 aa8.34□□□□□ -1.07
HOXA9-206ENST00000497089 WDR43Q15061 677 aaKnown RBP eCLIP8.34□□□□□ -1.07
HOXA9-206ENST00000497089 C2CD5Q86YS7 1000 aa8.34□□□□□ -1.07
HOXA9-206ENST00000497089 CNBD1Q8NA66 436 aa8.34□□□□□ -1.07
HOXA9-206ENST00000497089 CLP1Q92989 425 aaKnown RBP8.34□□□□□ -1.07
HOXA9-206ENST00000497089 OSBPL3Q9H4L5 887 aa8.34□□□□□ -1.07
HOXA9-206ENST00000497089 KIAA1024Q9UPX6 916 aa8.34□□□□□ -1.07
HOXA9-206ENST00000497089 ADH1AP07327 375 aa8.33□□□□□ -1.08
HOXA9-206ENST00000497089 HNRNPUQ00839 825 aaKnown RBP eCLIP8.33□□□□□ -1.08
HOXA9-206ENST00000497089 LRP10Q7Z4F1 713 aa8.33□□□□□ -1.08
HOXA9-206ENST00000497089 CHMP4AQ9BY43 222 aa8.33□□□□□ -1.08
HOXA9-206ENST00000497089 GZF1Q9H116 711 aaPredicted RBP8.33□□□□□ -1.08
HOXA9-206ENST00000497089 TSPYL4Q9UJ04 414 aa8.33□□□□□ -1.08
HOXA9-206ENST00000497089 BRPF3Q9ULD4 1205 aa8.33□□□□□ -1.08
HOXA9-206ENST00000497089 FER1L6Q2WGJ9 1857 aa8.32□□□□□ -1.08
HOXA9-206ENST00000497089 SFI1A8K8P3 1242 aa8.32□□□□□ -1.08
HOXA9-206ENST00000497089 SRGNP10124 158 aa8.32□□□□□ -1.08
HOXA9-206ENST00000497089 ST5P78524 1137 aa8.32□□□□□ -1.08
HOXA9-206ENST00000497089 HLFQ16534 295 aa8.32□□□□□ -1.08
HOXA9-206ENST00000497089 C9orf131Q5VYM1 1079 aa8.32□□□□□ -1.08
HOXA9-206ENST00000497089 STYK1Q6J9G0 422 aa8.32□□□□□ -1.08
HOXA9-206ENST00000497089 MRPL14Q6P1L8 145 aaKnown RBP8.32□□□□□ -1.08
HOXA9-206ENST00000497089 TPTE2Q6XPS3 522 aa8.32□□□□□ -1.08
HOXA9-206ENST00000497089 NBPF5PQ86XG9 351 aaPredicted RBP8.32□□□□□ -1.08
HOXA9-206ENST00000497089 CCDC146Q8IYE0 955 aa8.32□□□□□ -1.08
HOXA9-206ENST00000497089 KDF1Q8NAX2 398 aaPredicted RBP8.32□□□□□ -1.08
HOXA9-206ENST00000497089 HINFPQ9BQA5 517 aa8.32□□□□□ -1.08
HOXA9-206ENST00000497089 TSEN34Q9BSV6 310 aaKnown RBP8.32□□□□□ -1.08
HOXA9-206ENST00000497089 NIP7Q9Y221 180 aaKnown RBP eCLIP8.32□□□□□ -1.08
HOXA9-206ENST00000497089 RRP7AQ9Y3A4 280 aaKnown RBP8.32□□□□□ -1.08
HOXA9-206ENST00000497089 MAP3K15Q6ZN16 1313 aa8.32□□□□□ -1.08
HOXA9-206ENST00000497089 IBTKQ9P2D0 1353 aaPredicted RBP8.31□□□□□ -1.08
HOXA9-206ENST00000497089 RIC1Q4ADV7 1423 aa8.31□□□□□ -1.08
HOXA9-206ENST00000497089 HOXB7P09629 217 aa8.31□□□□□ -1.08
HOXA9-206ENST00000497089 BMP1P13497 986 aa8.31□□□□□ -1.08
HOXA9-206ENST00000497089 LMNB1P20700 586 aa8.31□□□□□ -1.08
HOXA9-206ENST00000497089 HSP90AA2PQ14568 343 aaPredicted RBP8.31□□□□□ -1.08
HOXA9-206ENST00000497089 TTLL7Q6ZT98 887 aa8.31□□□□□ -1.08
HOXA9-206ENST00000497089 CYP2U1Q7Z449 544 aa8.31□□□□□ -1.08
HOXA9-206ENST00000497089 LINC00528Q8N1L1 170 aa8.31□□□□□ -1.08
HOXA9-206ENST00000497089 CNKSR1Q969H4 720 aa8.31□□□□□ -1.08
HOXA9-206ENST00000497089 MASTLQ96GX5 879 aa8.31□□□□□ -1.08
HOXA9-206ENST00000497089 AGBL1Q96MI9 1066 aa8.31□□□□□ -1.08
HOXA9-206ENST00000497089 DACH1Q9UI36 760 aa8.31□□□□□ -1.08
HOXA9-206ENST00000497089 SLX4Q8IY92 1834 aa8.31□□□□□ -1.08
HOXA9-206ENST00000497089 DICER1Q9UPY3 1922 aaKnown RBP8.3□□□□□ -1.08
HOXA9-206ENST00000497089 NFKBIEO00221 500 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms