RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 CELA3AP09093 270 aa5.34□□□□□ -1.55
EXOSC3-208ENST00000496910 CANXP27824 592 aaKnown RBP5.34□□□□□ -1.55
EXOSC3-208ENST00000496910 FANCCQ00597 558 aa5.34□□□□□ -1.55
EXOSC3-208ENST00000496910 IKBKEQ14164 716 aa5.34□□□□□ -1.55
EXOSC3-208ENST00000496910 PDZD3Q86UT5 571 aa5.34□□□□□ -1.55
EXOSC3-208ENST00000496910 METTL16Q86W50 562 aaKnown RBP5.34□□□□□ -1.55
EXOSC3-208ENST00000496910 KLHDC7BQ96G42 594 aa5.34□□□□□ -1.55
EXOSC3-208ENST00000496910 C8orf37Q96NL8 207 aa5.34□□□□□ -1.55
EXOSC3-208ENST00000496910 SRA1Q9HD15 236 aaKnown RBP5.34□□□□□ -1.55
EXOSC3-208ENST00000496910 OSGEPQ9NPF4 335 aa5.34□□□□□ -1.55
EXOSC3-208ENST00000496910 STK17AQ9UEE5 414 aa5.34□□□□□ -1.55
EXOSC3-208ENST00000496910 CAMTA1Q9Y6Y1 1673 aa5.34□□□□□ -1.56
EXOSC3-208ENST00000496910 KIAA0586Q9BVV6 1533 aa5.33□□□□□ -1.56
EXOSC3-208ENST00000496910 WISP1O95388 367 aa5.33□□□□□ -1.56
EXOSC3-208ENST00000496910 DLGAP3O95886 979 aa5.33□□□□□ -1.56
EXOSC3-208ENST00000496910 CTSBP07858 339 aa5.33□□□□□ -1.56
EXOSC3-208ENST00000496910 CDC25BP30305 580 aa5.33□□□□□ -1.56
EXOSC3-208ENST00000496910 TAF1CQ15572 869 aaPredicted RBP5.33□□□□□ -1.56
EXOSC3-208ENST00000496910 TPTE2Q6XPS3 522 aa5.33□□□□□ -1.56
EXOSC3-208ENST00000496910 ERMP1Q7Z2K6 904 aa5.33□□□□□ -1.56
EXOSC3-208ENST00000496910 MAP4K3Q8IVH8 894 aa5.33□□□□□ -1.56
EXOSC3-208ENST00000496910 BEND7Q8N7W2 519 aaPredicted RBP5.33□□□□□ -1.56
EXOSC3-208ENST00000496910 MRS2Q9HD23 443 aa5.33□□□□□ -1.56
EXOSC3-208ENST00000496910 CACNA2D2Q9NY47 1150 aa5.33□□□□□ -1.56
EXOSC3-208ENST00000496910 AKAP2Q9Y2D5 859 aa5.33□□□□□ -1.56
EXOSC3-208ENST00000496910 SHROOM2Q13796 1616 aa5.33□□□□□ -1.56
EXOSC3-208ENST00000496910 DDX3YO15523 660 aaKnown RBP5.32□□□□□ -1.56
EXOSC3-208ENST00000496910 ECEL1O95672 775 aa5.32□□□□□ -1.56
EXOSC3-208ENST00000496910 ITGB2P05107 769 aa5.32□□□□□ -1.56
EXOSC3-208ENST00000496910 SELPP16109 830 aa5.32□□□□□ -1.56
EXOSC3-208ENST00000496910 BMP6P22004 513 aa5.32□□□□□ -1.56
EXOSC3-208ENST00000496910 TSNAXIP1Q2TAA8 658 aa5.32□□□□□ -1.56
EXOSC3-208ENST00000496910 TRAPPC3LQ5T215 181 aa5.32□□□□□ -1.56
EXOSC3-208ENST00000496910 SV2BQ7L1I2 683 aa5.32□□□□□ -1.56
EXOSC3-208ENST00000496910 KLHL23Q8NBE8 558 aa5.32□□□□□ -1.56
EXOSC3-208ENST00000496910 SCARF2Q96GP6 870 aaPredicted RBP5.32□□□□□ -1.56
EXOSC3-208ENST00000496910 NOC4LQ9BVI4 516 aaKnown RBP5.32□□□□□ -1.56
EXOSC3-208ENST00000496910 ZFYVE1Q9HBF4 777 aa5.32□□□□□ -1.56
EXOSC3-208ENST00000496910 CUX1P39880 1505 aa5.32□□□□□ -1.56
EXOSC3-208ENST00000496910 NCOA1Q15788 1441 aa5.31□□□□□ -1.56
EXOSC3-208ENST00000496910 UHRF1BP1Q6BDS2 1440 aa5.31□□□□□ -1.56
EXOSC3-208ENST00000496910 ELNP15502 786 aa5.31□□□□□ -1.56
EXOSC3-208ENST00000496910 ZNF157P51786 506 aaPredicted RBP5.31□□□□□ -1.56
EXOSC3-208ENST00000496910 CABP4P57796 275 aa5.31□□□□□ -1.56
EXOSC3-208ENST00000496910 HDLBPQ00341 1268 aaKnown RBP5.31□□□□□ -1.56
EXOSC3-208ENST00000496910 ZNF252P-AS1Q0IIN9 211 aa5.31□□□□□ -1.56
EXOSC3-208ENST00000496910 C19orf57Q0VDD7 668 aa5.31□□□□□ -1.56
EXOSC3-208ENST00000496910 TMEM39AQ9NV64 488 aa5.31□□□□□ -1.56
EXOSC3-208ENST00000496910 PPP4R2Q9NY27 417 aa5.31□□□□□ -1.56
EXOSC3-208ENST00000496910 TTF2Q9UNY4 1162 aaKnown RBP5.31□□□□□ -1.56
EXOSC3-208ENST00000496910 EP400Q96L91 3159 aa5.31□□□□□ -1.56
EXOSC3-208ENST00000496910 BCL9LQ86UU0 1499 aa5.31□□□□□ -1.56
EXOSC3-208ENST00000496910 MAGI1Q96QZ7 1491 aaPredicted RBP5.31□□□□□ -1.56
EXOSC3-208ENST00000496910 LOC100289279A0A1B0GTE1 492 aa5.3□□□□□ -1.56
EXOSC3-208ENST00000496910 KRBA1A5PL33 1030 aa5.3□□□□□ -1.56
EXOSC3-208ENST00000496910 SPATA31C1P0DKV0 1188 aa5.3□□□□□ -1.56
EXOSC3-208ENST00000496910 CD68P34810 354 aaPredicted RBP5.3□□□□□ -1.56
EXOSC3-208ENST00000496910 RAD51AP2Q09MP3 1159 aa5.3□□□□□ -1.56
EXOSC3-208ENST00000496910 SUZ12Q15022 739 aaKnown RBP5.3□□□□□ -1.56
EXOSC3-208ENST00000496910 GRIK4Q16099 956 aa5.3□□□□□ -1.56
EXOSC3-208ENST00000496910 SHISA2Q6UWI4 295 aa5.3□□□□□ -1.56
EXOSC3-208ENST00000496910 KIAA1211Q6ZU35 1233 aa5.3□□□□□ -1.56
EXOSC3-208ENST00000496910 PODNQ7Z5L7 613 aa5.3□□□□□ -1.56
EXOSC3-208ENST00000496910 DNAJC5GQ8N7S2 189 aa5.3□□□□□ -1.56
EXOSC3-208ENST00000496910 UBASH3BQ8TF42 649 aa5.3□□□□□ -1.56
EXOSC3-208ENST00000496910 SLC7A3Q8WY07 619 aa5.3□□□□□ -1.56
EXOSC3-208ENST00000496910 CEP44Q9C0F1 390 aa5.3□□□□□ -1.56
EXOSC3-208ENST00000496910 COPRSQ9NQ92 184 aa5.3□□□□□ -1.56
EXOSC3-208ENST00000496910 METTL5Q9NRN9 209 aaKnown RBP5.3□□□□□ -1.56
EXOSC3-208ENST00000496910 NOP53Q9NZM5 478 aaKnown RBP5.3□□□□□ -1.56
EXOSC3-208ENST00000496910 RGS12O14924 1447 aa5.3□□□□□ -1.56
EXOSC3-208ENST00000496910 PIK3R2O00459 728 aa5.29□□□□□ -1.56
EXOSC3-208ENST00000496910 SCAMP3O14828 347 aaKnown RBP5.29□□□□□ -1.56
EXOSC3-208ENST00000496910 NME2P22392 152 aa5.29□□□□□ -1.56
EXOSC3-208ENST00000496910 RAC1P63000 192 aa5.29□□□□□ -1.56
EXOSC3-208ENST00000496910 KCNMA1Q12791 1236 aa5.29□□□□□ -1.56
EXOSC3-208ENST00000496910 Q6ZS46 218 aa5.29□□□□□ -1.56
EXOSC3-208ENST00000496910 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.29□□□□□ -1.56
EXOSC3-208ENST00000496910 SULF2Q8IWU5 870 aa5.29□□□□□ -1.56
EXOSC3-208ENST00000496910 TMEM87AQ8NBN3 555 aa5.29□□□□□ -1.56
EXOSC3-208ENST00000496910 PHC3Q8NDX5 983 aa5.29□□□□□ -1.56
EXOSC3-208ENST00000496910 GRIN3AQ8TCU5 1115 aa5.29□□□□□ -1.56
EXOSC3-208ENST00000496910 GAL3ST3Q96A11 431 aa5.29□□□□□ -1.56
EXOSC3-208ENST00000496910 RHOVQ96L33 236 aa5.29□□□□□ -1.56
EXOSC3-208ENST00000496910 GPN3Q9UHW5 284 aaPredicted RBP5.29□□□□□ -1.56
EXOSC3-208ENST00000496910 PDE4DIPQ5VU43 2346 aa5.29□□□□□ -1.56
EXOSC3-208ENST00000496910 TTC37Q6PGP7 1564 aa5.29□□□□□ -1.56
EXOSC3-208ENST00000496910 AATKQ6ZMQ8 1374 aa5.29□□□□□ -1.56
EXOSC3-208ENST00000496910 EPRSP07814 1512 aaKnown RBP5.28□□□□□ -1.56
EXOSC3-208ENST00000496910 PCNTO95613 3336 aa5.28□□□□□ -1.56
EXOSC3-208ENST00000496910 SPDYE3A6NKU9 549 aa5.28□□□□□ -1.56
EXOSC3-208ENST00000496910 TFE3P19532 575 aaPredicted RBP5.28□□□□□ -1.56
EXOSC3-208ENST00000496910 GARTP22102 1010 aa5.28□□□□□ -1.56
EXOSC3-208ENST00000496910 ITGAEP38570 1179 aa5.28□□□□□ -1.56
EXOSC3-208ENST00000496910 LIG3P49916 1009 aa5.28□□□□□ -1.56
EXOSC3-208ENST00000496910 NLRP12P59046 1061 aa5.28□□□□□ -1.56
EXOSC3-208ENST00000496910 ZC3H6P61129 1189 aaKnown RBP5.28□□□□□ -1.56
EXOSC3-208ENST00000496910 GSTM4Q03013 218 aa5.28□□□□□ -1.56
EXOSC3-208ENST00000496910 TRIM28Q13263 835 aaKnown RBP5.28□□□□□ -1.56
EXOSC3-208ENST00000496910 CCDC85BQ15834 202 aaPredicted RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms