RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.23■□□□□ 0.03
GARNL3-220ENST00000496711 SLC4A4Q9Y6R1 1079 aa15.23■□□□□ 0.03
GARNL3-220ENST00000496711 KIAA1551Q9HCM1 1747 aa15.23■□□□□ 0.03
GARNL3-220ENST00000496711 MYH6P13533 1939 aa15.23■□□□□ 0.03
GARNL3-220ENST00000496711 RPS6KA4O75676 772 aa15.23■□□□□ 0.03
GARNL3-220ENST00000496711 ADCY5O95622 1261 aa15.23■□□□□ 0.03
GARNL3-220ENST00000496711 CTDSPL2Q05D32 466 aa15.23■□□□□ 0.03
GARNL3-220ENST00000496711 AKNAD1Q5T1N1 836 aa15.23■□□□□ 0.03
GARNL3-220ENST00000496711 CPLX2Q6PUV4 134 aaKnown RBP15.23■□□□□ 0.03
GARNL3-220ENST00000496711 PTF1AQ7RTS3 328 aa15.23■□□□□ 0.03
GARNL3-220ENST00000496711 BRAPQ7Z569 592 aa15.23■□□□□ 0.03
GARNL3-220ENST00000496711 IGDCC4Q8TDY8 1250 aa15.23■□□□□ 0.03
GARNL3-220ENST00000496711 LY9Q9HBG7 655 aa15.23■□□□□ 0.03
GARNL3-220ENST00000496711 DLEC1Q9Y238 1755 aa15.22■□□□□ 0.03
GARNL3-220ENST00000496711 PRKAB2O43741 272 aa15.22■□□□□ 0.03
GARNL3-220ENST00000496711 GYG1P46976 350 aa15.22■□□□□ 0.03
GARNL3-220ENST00000496711 CAVIN4Q5BKX8 364 aa15.22■□□□□ 0.03
GARNL3-220ENST00000496711 TMEM67Q5HYA8 995 aa15.22■□□□□ 0.03
GARNL3-220ENST00000496711 OTUD7BQ6GQQ9 843 aa15.22■□□□□ 0.03
GARNL3-220ENST00000496711 NFXL1Q6ZNB6 911 aa15.22■□□□□ 0.03
GARNL3-220ENST00000496711 CCDC73Q6ZRK6 1079 aa15.22■□□□□ 0.03
GARNL3-220ENST00000496711 CCAR1Q8IX12 1150 aaKnown RBP15.22■□□□□ 0.03
GARNL3-220ENST00000496711 STAG1Q8WVM7 1258 aa15.22■□□□□ 0.03
GARNL3-220ENST00000496711 RTEL1Q9NZ71 1219 aa15.22■□□□□ 0.03
GARNL3-220ENST00000496711 IQSEC3Q9UPP2 1182 aaPredicted RBP15.22■□□□□ 0.03
GARNL3-220ENST00000496711 NID2Q14112 1375 aa15.22■□□□□ 0.03
GARNL3-220ENST00000496711 GNPATO15228 680 aa15.21■□□□□ 0.03
GARNL3-220ENST00000496711 ZBTB43O43298 467 aa15.21■□□□□ 0.03
GARNL3-220ENST00000496711 ZNF500O60304 480 aaPredicted RBP15.21■□□□□ 0.03
GARNL3-220ENST00000496711 CYP7A1P22680 504 aa15.21■□□□□ 0.03
GARNL3-220ENST00000496711 LIFRP42702 1097 aa15.21■□□□□ 0.03
GARNL3-220ENST00000496711 MFSD6Q6ZSS7 791 aa15.21■□□□□ 0.03
GARNL3-220ENST00000496711 MICU3Q86XE3 530 aa15.21■□□□□ 0.03
GARNL3-220ENST00000496711 MIGA1Q8NAN2 632 aa15.21■□□□□ 0.03
GARNL3-220ENST00000496711 USP21Q9UK80 565 aa15.21■□□□□ 0.03
GARNL3-220ENST00000496711 MINPP1Q9UNW1 487 aa15.21■□□□□ 0.03
GARNL3-220ENST00000496711 DUOX1Q9NRD9 1551 aa15.21■□□□□ 0.03
GARNL3-220ENST00000496711 SPATA31A6Q5VVP1 1343 aa15.21■□□□□ 0.02
GARNL3-220ENST00000496711 GOLGA8AA7E2F4 631 aa15.2■□□□□ 0.02
GARNL3-220ENST00000496711 ME1P48163 572 aa15.2■□□□□ 0.02
GARNL3-220ENST00000496711 SASS6Q6UVJ0 657 aa15.2■□□□□ 0.02
GARNL3-220ENST00000496711 CELF1Q92879 486 aaKnown RBP15.2■□□□□ 0.02
GARNL3-220ENST00000496711 SETDB2Q96T68 719 aa15.2■□□□□ 0.02
GARNL3-220ENST00000496711 GOLPH3LQ9H4A5 285 aa15.2■□□□□ 0.02
GARNL3-220ENST00000496711 SENP2Q9HC62 589 aa15.2■□□□□ 0.02
GARNL3-220ENST00000496711 ABCF2Q9UG63 623 aa15.2■□□□□ 0.02
GARNL3-220ENST00000496711 SRP68Q9UHB9 627 aaKnown RBP15.2■□□□□ 0.02
GARNL3-220ENST00000496711 CCNL1Q9UK58 526 aaPredicted RBP15.2■□□□□ 0.02
GARNL3-220ENST00000496711 MYH2Q9UKX2 1941 aa15.2■□□□□ 0.02
GARNL3-220ENST00000496711 IFIT3O14879 490 aaKnown RBP15.2■□□□□ 0.02
GARNL3-220ENST00000496711 CTAGE5O15320 804 aa15.2■□□□□ 0.02
GARNL3-220ENST00000496711 ZPR1O75312 459 aa15.2■□□□□ 0.02
GARNL3-220ENST00000496711 RXRAP19793 462 aa15.2■□□□□ 0.02
GARNL3-220ENST00000496711 CDC27P30260 824 aa15.2■□□□□ 0.02
GARNL3-220ENST00000496711 KIF23Q02241 960 aaPredicted RBP15.2■□□□□ 0.02
GARNL3-220ENST00000496711 FAM160A1Q05DH4 1040 aa15.2■□□□□ 0.02
GARNL3-220ENST00000496711 ANO6Q4KMQ2 910 aa15.2■□□□□ 0.02
GARNL3-220ENST00000496711 MYSM1Q5VVJ2 828 aa15.2■□□□□ 0.02
GARNL3-220ENST00000496711 SMIM5Q71RC9 77 aa15.2■□□□□ 0.02
GARNL3-220ENST00000496711 NBPF5PQ86XG9 351 aaPredicted RBP15.2■□□□□ 0.02
GARNL3-220ENST00000496711 VPS37DQ86XT2 251 aa15.2■□□□□ 0.02
GARNL3-220ENST00000496711 INCENPQ9NQS7 918 aa15.2■□□□□ 0.02
GARNL3-220ENST00000496711 POLR3EQ9NVU0 708 aa15.2■□□□□ 0.02
GARNL3-220ENST00000496711 RAI14Q9P0K7 980 aa15.2■□□□□ 0.02
GARNL3-220ENST00000496711 ZSWIM5Q9P217 1185 aa15.2■□□□□ 0.02
GARNL3-220ENST00000496711 TACC3Q9Y6A5 838 aa15.2■□□□□ 0.02
GARNL3-220ENST00000496711 MAGEB6P1A0A0J9YX57 407 aa15.19■□□□□ 0.02
GARNL3-220ENST00000496711 CCDC69A6NI79 296 aa15.19■□□□□ 0.02
GARNL3-220ENST00000496711 YEATS4O95619 227 aa15.19■□□□□ 0.02
GARNL3-220ENST00000496711 ADGRA1Q86SQ6 560 aa15.19■□□□□ 0.02
GARNL3-220ENST00000496711 KCNG4Q8TDN1 519 aa15.19■□□□□ 0.02
GARNL3-220ENST00000496711 NLRP3Q96P20 1036 aa15.19■□□□□ 0.02
GARNL3-220ENST00000496711 ALG1Q9BT22 464 aa15.19■□□□□ 0.02
GARNL3-220ENST00000496711 MTA3Q9BTC8 594 aa15.19■□□□□ 0.02
GARNL3-220ENST00000496711 RNF41Q9H4P4 317 aaPredicted RBP15.19■□□□□ 0.02
GARNL3-220ENST00000496711 SLC12A7Q9Y666 1083 aa15.19■□□□□ 0.02
GARNL3-220ENST00000496711 STK36Q9NRP7 1315 aa15.19■□□□□ 0.02
GARNL3-220ENST00000496711 KIF28PB7ZC32 967 aa15.18■□□□□ 0.02
GARNL3-220ENST00000496711 SEMA3EO15041 775 aa15.18■□□□□ 0.02
GARNL3-220ENST00000496711 KINO60870 393 aaKnown RBP15.18■□□□□ 0.02
GARNL3-220ENST00000496711 PPARAQ07869 468 aa15.18■□□□□ 0.02
GARNL3-220ENST00000496711 SART3Q15020 963 aaKnown RBP15.18■□□□□ 0.02
GARNL3-220ENST00000496711 STK38Q15208 465 aa15.18■□□□□ 0.02
GARNL3-220ENST00000496711 FSIP1Q8NA03 581 aa15.18■□□□□ 0.02
GARNL3-220ENST00000496711 LINC00301Q8NCQ3 95 aa15.18■□□□□ 0.02
GARNL3-220ENST00000496711 MRPS27Q92552 414 aaKnown RBP15.18■□□□□ 0.02
GARNL3-220ENST00000496711 GJB4Q9NTQ9 266 aa15.18■□□□□ 0.02
GARNL3-220ENST00000496711 RTCBQ9Y3I0 505 aaKnown RBP15.18■□□□□ 0.02
GARNL3-220ENST00000496711 PDS5AQ29RF7 1337 aaKnown RBP15.18■□□□□ 0.02
GARNL3-220ENST00000496711 A0A1W2PQ27 194 aa15.18■□□□□ 0.02
GARNL3-220ENST00000496711 A0A1W2PQ64 194 aa15.18■□□□□ 0.02
GARNL3-220ENST00000496711 A0A1W2PQD8 194 aa15.18■□□□□ 0.02
GARNL3-220ENST00000496711 CAVIN2O95810 425 aa15.18■□□□□ 0.02
GARNL3-220ENST00000496711 POLR3DP05423 398 aaPredicted RBP15.18■□□□□ 0.02
GARNL3-220ENST00000496711 IARSP41252 1262 aaKnown RBP15.18■□□□□ 0.02
GARNL3-220ENST00000496711 PLCB2Q00722 1185 aa15.18■□□□□ 0.02
GARNL3-220ENST00000496711 SNW1Q13573 536 aaKnown RBP15.18■□□□□ 0.02
GARNL3-220ENST00000496711 NTRK3Q16288 839 aa15.18■□□□□ 0.02
GARNL3-220ENST00000496711 RRP12Q5JTH9 1297 aaKnown RBP15.18■□□□□ 0.02
GARNL3-220ENST00000496711 ADALQ6DHV7 355 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms