RNA–Protein interactions for RNA: ENST00000496026.1

HDAC9-226, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 860 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-226ENST00000496026 PGAP2Q9UHJ9 254 aa17.84■□□□□ 0.45
HDAC9-226ENST00000496026 ZNF532Q9HCE3 1301 aa17.83■□□□□ 0.44
HDAC9-226ENST00000496026 GPR75-ASB3A0A0A6YYF3 556 aa17.83■□□□□ 0.44
HDAC9-226ENST00000496026 BAG3O95817 575 aa17.83■□□□□ 0.44
HDAC9-226ENST00000496026 ADD2P35612 726 aa17.83■□□□□ 0.44
HDAC9-226ENST00000496026 TTC22Q5TAA0 569 aa17.83■□□□□ 0.44
HDAC9-226ENST00000496026 CDC42EP5Q6NZY7 148 aa17.83■□□□□ 0.44
HDAC9-226ENST00000496026 APOBEC3FQ8IUX4 373 aaKnown RBP17.83■□□□□ 0.44
HDAC9-226ENST00000496026 SULF1Q8IWU6 871 aa17.83■□□□□ 0.44
HDAC9-226ENST00000496026 PITPNM2Q9BZ72 1349 aa17.82■□□□□ 0.44
HDAC9-226ENST00000496026 ZFYP08048 801 aaPredicted RBP17.82■□□□□ 0.44
HDAC9-226ENST00000496026 SPDYE2Q495Y8 402 aa17.82■□□□□ 0.44
HDAC9-226ENST00000496026 KRT26Q7Z3Y9 468 aa17.82■□□□□ 0.44
HDAC9-226ENST00000496026 ADGRA1Q86SQ6 560 aa17.82■□□□□ 0.44
HDAC9-226ENST00000496026 MIGA1Q8NAN2 632 aa17.82■□□□□ 0.44
HDAC9-226ENST00000496026 AATFQ9NY61 560 aaKnown RBP eCLIP17.82■□□□□ 0.44
HDAC9-226ENST00000496026 TCRBV5S4A2TA0A5A2 114 aa17.81■□□□□ 0.44
HDAC9-226ENST00000496026 RNF113AO15541 343 aaKnown RBP17.81■□□□□ 0.44
HDAC9-226ENST00000496026 PLCG2P16885 1265 aa17.81■□□□□ 0.44
HDAC9-226ENST00000496026 CACNB3P54284 484 aa17.81■□□□□ 0.44
HDAC9-226ENST00000496026 UBE3CQ15386 1083 aa17.81■□□□□ 0.44
HDAC9-226ENST00000496026 CDC37L1Q7L3B6 337 aa17.81■□□□□ 0.44
HDAC9-226ENST00000496026 USP48Q86UV5 1035 aa17.81■□□□□ 0.44
HDAC9-226ENST00000496026 SCAF8Q9UPN6 1271 aaKnown RBP17.81■□□□□ 0.44
HDAC9-226ENST00000496026 GTF3C3Q9Y5Q9 886 aa17.81■□□□□ 0.44
HDAC9-226ENST00000496026 MAST2Q6P0Q8 1798 aa17.81■□□□□ 0.44
HDAC9-226ENST00000496026 ADAMTSL1Q8N6G6 1762 aa17.81■□□□□ 0.44
HDAC9-226ENST00000496026 MAGEB6P1A0A0J9YX57 407 aa17.8■□□□□ 0.44
HDAC9-226ENST00000496026 TCP10L2B9ZVM9 353 aa17.8■□□□□ 0.44
HDAC9-226ENST00000496026 GSPT1P15170 499 aaKnown RBP17.8■□□□□ 0.44
HDAC9-226ENST00000496026 TNNI2P48788 182 aa17.8■□□□□ 0.44
HDAC9-226ENST00000496026 TNFAIP1Q13829 316 aa17.8■□□□□ 0.44
HDAC9-226ENST00000496026 SLFNL1Q499Z3 407 aa17.8■□□□□ 0.44
HDAC9-226ENST00000496026 ADM5C9JUS6 153 aa17.79■□□□□ 0.44
HDAC9-226ENST00000496026 CHGBP05060 677 aa17.79■□□□□ 0.44
HDAC9-226ENST00000496026 PPP4CP60510 307 aa17.79■□□□□ 0.44
HDAC9-226ENST00000496026 DYNLL1P63167 89 aaKnown RBP17.79■□□□□ 0.44
HDAC9-226ENST00000496026 FSTL1Q12841 308 aa17.79■□□□□ 0.44
HDAC9-226ENST00000496026 CERS3Q8IU89 383 aa17.79■□□□□ 0.44
HDAC9-226ENST00000496026 SH3RF3Q8TEJ3 882 aaPredicted RBP17.79■□□□□ 0.44
HDAC9-226ENST00000496026 GLIS2Q9BZE0 524 aaPredicted RBP17.79■□□□□ 0.44
HDAC9-226ENST00000496026 DOCK2Q92608 1830 aa17.79■□□□□ 0.44
HDAC9-226ENST00000496026 SDSP20132 328 aa17.78■□□□□ 0.44
HDAC9-226ENST00000496026 RHBDL3P58872 404 aa17.78■□□□□ 0.44
HDAC9-226ENST00000496026 TEX11Q8IYF3 940 aa17.78■□□□□ 0.44
HDAC9-226ENST00000496026 APPBP2Q92624 585 aa17.78■□□□□ 0.44
HDAC9-226ENST00000496026 MYH2Q9UKX2 1941 aa17.77■□□□□ 0.44
HDAC9-226ENST00000496026 MBD4O95243 580 aa17.77■□□□□ 0.44
HDAC9-226ENST00000496026 PICALMQ13492 652 aa17.77■□□□□ 0.44
HDAC9-226ENST00000496026 RASA3Q14644 834 aa17.77■□□□□ 0.44
HDAC9-226ENST00000496026 FKBP1CQ5VVH2 108 aa17.77■□□□□ 0.44
HDAC9-226ENST00000496026 TICAM2Q86XR7 235 aa17.77■□□□□ 0.44
HDAC9-226ENST00000496026 AIDAQ96BJ3 306 aa17.77■□□□□ 0.44
HDAC9-226ENST00000496026 DEFB129Q9H1M3 183 aa17.77■□□□□ 0.44
HDAC9-226ENST00000496026 HIP1O00291 1037 aa17.76■□□□□ 0.43
HDAC9-226ENST00000496026 TRAF5O00463 557 aa17.76■□□□□ 0.43
HDAC9-226ENST00000496026 TCP10Q12799 353 aa17.76■□□□□ 0.43
HDAC9-226ENST00000496026 NFIAQ12857 509 aa17.76■□□□□ 0.43
HDAC9-226ENST00000496026 RIOK1Q9BRS2 568 aaKnown RBP17.76■□□□□ 0.43
HDAC9-226ENST00000496026 IDI2Q9BXS1 227 aa17.76■□□□□ 0.43
HDAC9-226ENST00000496026 PUS7LQ9H0K6 701 aaKnown RBP17.76■□□□□ 0.43
HDAC9-226ENST00000496026 ARMT1Q9H993 441 aa17.76■□□□□ 0.43
HDAC9-226ENST00000496026 PPP2R3BQ9Y5P8 575 aa17.76■□□□□ 0.43
HDAC9-226ENST00000496026 RFX7Q2KHR2 1363 aa17.76■□□□□ 0.43
HDAC9-226ENST00000496026 MYO5AQ9Y4I1 1855 aaKnown RBP17.75■□□□□ 0.43
HDAC9-226ENST00000496026 WDHD1O75717 1129 aaPredicted RBP17.75■□□□□ 0.43
HDAC9-226ENST00000496026 ITGBL1O95965 494 aaPredicted RBP17.75■□□□□ 0.43
HDAC9-226ENST00000496026 USP5P45974 858 aa17.75■□□□□ 0.43
HDAC9-226ENST00000496026 ZMYM1Q5SVZ6 1142 aa17.75■□□□□ 0.43
HDAC9-226ENST00000496026 DLK2Q6UY11 383 aa17.75■□□□□ 0.43
HDAC9-226ENST00000496026 FAM83AQ86UY5 434 aa17.75■□□□□ 0.43
HDAC9-226ENST00000496026 LCORLQ8N3X6 602 aa17.75■□□□□ 0.43
HDAC9-226ENST00000496026 TGFBRAP1Q8WUH2 860 aa17.75■□□□□ 0.43
HDAC9-226ENST00000496026 OSBP2Q969R2 916 aa17.75■□□□□ 0.43
HDAC9-226ENST00000496026 CRNKL1Q9BZJ0 848 aaKnown RBP17.75■□□□□ 0.43
HDAC9-226ENST00000496026 DIAPH3Q9NSV4 1193 aa17.75■□□□□ 0.43
HDAC9-226ENST00000496026 FAM198AQ9UFP1 575 aa17.75■□□□□ 0.43
HDAC9-226ENST00000496026 ENTPD3O75355 529 aa17.74■□□□□ 0.43
HDAC9-226ENST00000496026 BMP2KLQ5H9B9 411 aa17.74■□□□□ 0.43
HDAC9-226ENST00000496026 PRAMEF18Q5VWM3 479 aa17.74■□□□□ 0.43
HDAC9-226ENST00000496026 FAM151AQ8WW52 585 aa17.74■□□□□ 0.43
HDAC9-226ENST00000496026 CDCA5Q96FF9 252 aa17.74■□□□□ 0.43
HDAC9-226ENST00000496026 SEC62Q99442 399 aaKnown RBP17.74■□□□□ 0.43
HDAC9-226ENST00000496026 TMEM39BQ9GZU3 492 aa17.74■□□□□ 0.43
HDAC9-226ENST00000496026 ZNF408Q9H9D4 720 aa17.74■□□□□ 0.43
HDAC9-226ENST00000496026 DDX4Q9NQI0 724 aaKnown RBP17.74■□□□□ 0.43
HDAC9-226ENST00000496026 CNTNAP1P78357 1384 aa17.74■□□□□ 0.43
HDAC9-226ENST00000496026 M0R2C6 588 aa17.73■□□□□ 0.43
HDAC9-226ENST00000496026 FMR1Q06787 632 aaKnown RBP eCLIP17.73■□□□□ 0.43
HDAC9-226ENST00000496026 NMIQ13287 307 aaPredicted RBP17.73■□□□□ 0.43
HDAC9-226ENST00000496026 MAPKAPK5Q8IW41 473 aa17.73■□□□□ 0.43
HDAC9-226ENST00000496026 ZSCAN29Q8IWY8 852 aaPredicted RBP17.73■□□□□ 0.43
HDAC9-226ENST00000496026 FAM227BQ96M60 508 aa17.73■□□□□ 0.43
HDAC9-226ENST00000496026 HELLSQ9NRZ9 838 aa17.73■□□□□ 0.43
HDAC9-226ENST00000496026 GPAA1O43292 621 aa17.72■□□□□ 0.43
HDAC9-226ENST00000496026 NF2P35240 595 aa17.72■□□□□ 0.43
HDAC9-226ENST00000496026 SUPT20HL1Q3ZLR7 823 aa17.72■□□□□ 0.43
HDAC9-226ENST00000496026 ZFPM1Q8IX07 1006 aa17.72■□□□□ 0.43
HDAC9-226ENST00000496026 OSBPL5Q9H0X9 879 aaPredicted RBP17.72■□□□□ 0.43
HDAC9-226ENST00000496026 SLC4A4Q9Y6R1 1079 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms