RNA–Protein interactions for RNA: ENST00000495645.5

CHPF2-204, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 2 BASIC

Gene CHPF2, Length 2,709 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-204ENST00000495645 CASZ1Q86V15 1759 aa17.5■□□□□ 0.39
CHPF2-204ENST00000495645 ST5P78524 1137 aa17.49■□□□□ 0.39
CHPF2-204ENST00000495645 GNL3LQ9NVN8 582 aaKnown RBP17.49■□□□□ 0.39
CHPF2-204ENST00000495645 CTNNA3Q9UI47 895 aa17.49■□□□□ 0.39
CHPF2-204ENST00000495645 PATL2C9JE40 543 aaKnown RBP17.49■□□□□ 0.39
CHPF2-204ENST00000495645 ANKRD1Q15327 319 aa17.49■□□□□ 0.39
CHPF2-204ENST00000495645 RALYLQ86SE5 291 aaKnown RBP17.49■□□□□ 0.39
CHPF2-204ENST00000495645 RNF214Q8ND24 703 aa17.49■□□□□ 0.39
CHPF2-204ENST00000495645 WDR33Q9C0J8 1336 aaKnown RBP17.49■□□□□ 0.39
CHPF2-204ENST00000495645 KLF18A0A0U1RQI7 1052 aa17.49■□□□□ 0.39
CHPF2-204ENST00000495645 F13A1P00488 732 aa17.49■□□□□ 0.39
CHPF2-204ENST00000495645 NAA16Q6N069 864 aaPredicted RBP17.49■□□□□ 0.39
CHPF2-204ENST00000495645 USP48Q86UV5 1035 aa17.49■□□□□ 0.39
CHPF2-204ENST00000495645 TFIP11Q9UBB9 837 aaKnown RBP17.49■□□□□ 0.39
CHPF2-204ENST00000495645 PNPLA7Q6ZV29 1317 aa17.48■□□□□ 0.39
CHPF2-204ENST00000495645 SYCE3A1L190 88 aa17.48■□□□□ 0.39
CHPF2-204ENST00000495645 CRY2Q49AN0 593 aa17.48■□□□□ 0.39
CHPF2-204ENST00000495645 NSUN4Q96CB9 384 aaKnown RBP17.48■□□□□ 0.39
CHPF2-204ENST00000495645 RIOK1Q9BRS2 568 aaKnown RBP17.48■□□□□ 0.39
CHPF2-204ENST00000495645 TMEM63CQ9P1W3 806 aa17.48■□□□□ 0.39
CHPF2-204ENST00000495645 IRS2Q9Y4H2 1338 aa17.48■□□□□ 0.39
CHPF2-204ENST00000495645 PLSCR1O15162 318 aa17.48■□□□□ 0.39
CHPF2-204ENST00000495645 NCOA7Q8NI08 942 aa17.48■□□□□ 0.39
CHPF2-204ENST00000495645 MXD3Q9BW11 206 aa17.48■□□□□ 0.39
CHPF2-204ENST00000495645 ZSWIM5Q9P217 1185 aa17.48■□□□□ 0.39
CHPF2-204ENST00000495645 COL24A1Q17RW2 1714 aa17.47■□□□□ 0.39
CHPF2-204ENST00000495645 MAGEB6P1A0A0J9YX57 407 aa17.47■□□□□ 0.39
CHPF2-204ENST00000495645 C6orf229H3BNL8 230 aa17.47■□□□□ 0.39
CHPF2-204ENST00000495645 CMTR1Q8N1G2 835 aaKnown RBP17.47■□□□□ 0.39
CHPF2-204ENST00000495645 NSUN7Q8NE18 718 aaKnown RBP17.47■□□□□ 0.39
CHPF2-204ENST00000495645 ANKRD2Q9GZV1 360 aa17.47■□□□□ 0.39
CHPF2-204ENST00000495645 CYP2D6P10635 497 aa17.47■□□□□ 0.39
CHPF2-204ENST00000495645 MPNDQ8N594 471 aa17.47■□□□□ 0.39
CHPF2-204ENST00000495645 AIFM3Q96NN9 605 aa17.47■□□□□ 0.39
CHPF2-204ENST00000495645 FTOQ9C0B1 505 aaKnown RBP eCLIP17.47■□□□□ 0.39
CHPF2-204ENST00000495645 HPS5Q9UPZ3 1129 aa17.47■□□□□ 0.39
CHPF2-204ENST00000495645 PTPDC1A2A3K4 754 aa17.46■□□□□ 0.39
CHPF2-204ENST00000495645 MCM5P33992 734 aa17.46■□□□□ 0.39
CHPF2-204ENST00000495645 ADD1P35611 737 aaKnown RBP17.46■□□□□ 0.39
CHPF2-204ENST00000495645 CCDC82Q8N4S0 544 aa17.46■□□□□ 0.39
CHPF2-204ENST00000495645 RGPD3A6NKT7 1758 aaPredicted RBP17.46■□□□□ 0.39
CHPF2-204ENST00000495645 RGPD4Q7Z3J3 1758 aa17.46■□□□□ 0.39
CHPF2-204ENST00000495645 GOLGA8BA8MQT2 603 aa17.46■□□□□ 0.39
CHPF2-204ENST00000495645 CEBPZQ03701 1054 aaKnown RBP17.46■□□□□ 0.39
CHPF2-204ENST00000495645 ISY1Q9ULR0 285 aaKnown RBP17.46■□□□□ 0.39
CHPF2-204ENST00000495645 LAMA4Q16363 1823 aa17.46■□□□□ 0.38
CHPF2-204ENST00000495645 RGL2O15211 777 aa17.45■□□□□ 0.38
CHPF2-204ENST00000495645 PFKFB2O60825 505 aa17.45■□□□□ 0.38
CHPF2-204ENST00000495645 HMGB1P09429 215 aaKnown RBP17.45■□□□□ 0.38
CHPF2-204ENST00000495645 MICU3Q86XE3 530 aa17.45■□□□□ 0.38
CHPF2-204ENST00000495645 AGXT2Q9BYV1 514 aa17.45■□□□□ 0.38
CHPF2-204ENST00000495645 ALDH8A1Q9H2A2 487 aaPredicted RBP17.45■□□□□ 0.38
CHPF2-204ENST00000495645 TCHHQ07283 1943 aa17.45■□□□□ 0.38
CHPF2-204ENST00000495645 SOCS7O14512 581 aa17.44■□□□□ 0.38
CHPF2-204ENST00000495645 FDPSP14324 419 aaKnown RBP17.44■□□□□ 0.38
CHPF2-204ENST00000495645 CHRNA5P30532 468 aa17.44■□□□□ 0.38
CHPF2-204ENST00000495645 TRDNQ13061 729 aa17.44■□□□□ 0.38
CHPF2-204ENST00000495645 XDHP47989 1333 aa17.44■□□□□ 0.38
CHPF2-204ENST00000495645 MYH7P12883 1935 aa17.44■□□□□ 0.38
CHPF2-204ENST00000495645 F8W031 263 aaPredicted RBP17.44■□□□□ 0.38
CHPF2-204ENST00000495645 FBXW7Q969H0 707 aa17.44■□□□□ 0.38
CHPF2-204ENST00000495645 ZNF622Q969S3 477 aaKnown RBP eCLIP17.44■□□□□ 0.382e-7■□□□□ 10
CHPF2-204ENST00000495645 KCNQ5Q9NR82 932 aa17.44■□□□□ 0.38
CHPF2-204ENST00000495645 TNS1Q9HBL0 1735 aaKnown RBP17.44■□□□□ 0.38
CHPF2-204ENST00000495645 USP17L12C9JPN9 530 aa17.43■□□□□ 0.38
CHPF2-204ENST00000495645 USP17L21D6R901 530 aa17.43■□□□□ 0.38
CHPF2-204ENST00000495645 DOK7Q18PE1 504 aa17.43■□□□□ 0.38
CHPF2-204ENST00000495645 TBC1D16Q8TBP0 767 aa17.43■□□□□ 0.38
CHPF2-204ENST00000495645 PHKBQ93100 1093 aa17.43■□□□□ 0.38
CHPF2-204ENST00000495645 ARAP2Q8WZ64 1704 aa17.43■□□□□ 0.38
CHPF2-204ENST00000495645 CCDC173Q0VFZ6 552 aa17.43■□□□□ 0.38
CHPF2-204ENST00000495645 RBM17Q96I25 401 aaKnown RBP17.43■□□□□ 0.38
CHPF2-204ENST00000495645 ZMYND15Q9H091 742 aa17.43■□□□□ 0.38
CHPF2-204ENST00000495645 PTMSP20962 102 aa17.42■□□□□ 0.38
CHPF2-204ENST00000495645 CDC27P30260 824 aa17.42■□□□□ 0.38
CHPF2-204ENST00000495645 NMT2O60551 498 aa17.42■□□□□ 0.38
CHPF2-204ENST00000495645 SRGNP10124 158 aa17.42■□□□□ 0.38
CHPF2-204ENST00000495645 PPARAQ07869 468 aa17.42■□□□□ 0.38
CHPF2-204ENST00000495645 CD209Q9NNX6 404 aa17.42■□□□□ 0.38
CHPF2-204ENST00000495645 AKNAD1Q5T1N1 836 aa17.41■□□□□ 0.38
CHPF2-204ENST00000495645 MFSD6Q6ZSS7 791 aa17.41■□□□□ 0.38
CHPF2-204ENST00000495645 DZIP1Q86YF9 867 aaKnown RBP17.41■□□□□ 0.38
CHPF2-204ENST00000495645 NLGN1Q8N2Q7 840 aa17.41■□□□□ 0.38
CHPF2-204ENST00000495645 FAM184AQ8NB25 1140 aa17.41■□□□□ 0.38
CHPF2-204ENST00000495645 IGDCC4Q8TDY8 1250 aa17.41■□□□□ 0.38
CHPF2-204ENST00000495645 ANP32BQ92688 251 aaKnown RBP17.41■□□□□ 0.38
CHPF2-204ENST00000495645 GGA1Q9UJY5 639 aa17.41■□□□□ 0.38
CHPF2-204ENST00000495645 USP17L8P0C7I0 530 aa17.41■□□□□ 0.38
CHPF2-204ENST00000495645 ZNF445P59923 1031 aa17.41■□□□□ 0.38
CHPF2-204ENST00000495645 IFIT3O14879 490 aaKnown RBP17.41■□□□□ 0.38
CHPF2-204ENST00000495645 TMEM67Q5HYA8 995 aa17.41■□□□□ 0.38
CHPF2-204ENST00000495645 NFXL1Q6ZNB6 911 aa17.41■□□□□ 0.38
CHPF2-204ENST00000495645 TDRD7Q8NHU6 1098 aaKnown RBP17.41■□□□□ 0.38
CHPF2-204ENST00000495645 A0A1B0GUL6 1792 aa17.4■□□□□ 0.38
CHPF2-204ENST00000495645 PPEF1O14829 653 aaPredicted RBP17.4■□□□□ 0.38
CHPF2-204ENST00000495645 PPP1R9BQ96SB3 815 aa17.4■□□□□ 0.38
CHPF2-204ENST00000495645 ANGEL1Q9UNK9 670 aaKnown RBP17.4■□□□□ 0.38
CHPF2-204ENST00000495645 CACNA1SQ13698 1873 aa17.4■□□□□ 0.38
CHPF2-204ENST00000495645 H3BQV1 296 aa17.4■□□□□ 0.38
CHPF2-204ENST00000495645 SH2B2O14492 632 aaPredicted RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms