RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 TDRD3Q9H7E2 651 aaKnown RBP20.7■□□□□ 0.9
HDAC6-235ENST00000495515 VEZTQ9HBM0 779 aa20.7■□□□□ 0.9
HDAC6-235ENST00000495515 ZNF70Q9UC06 446 aaPredicted RBP20.7■□□□□ 0.9
HDAC6-235ENST00000495515 CLRN2A0PK11 232 aa20.69■□□□□ 0.9
HDAC6-235ENST00000495515 PDE6AP16499 860 aa20.69■□□□□ 0.9
HDAC6-235ENST00000495515 PLCG2P16885 1265 aa20.69■□□□□ 0.9
HDAC6-235ENST00000495515 BTDP43251 543 aa20.69■□□□□ 0.9
HDAC6-235ENST00000495515 ZNF384Q8TF68 577 aa20.69■□□□□ 0.9
HDAC6-235ENST00000495515 USP40Q9NVE5 1235 aa20.69■□□□□ 0.9
HDAC6-235ENST00000495515 ASTN2O75129 1339 aaPredicted RBP20.69■□□□□ 0.9
HDAC6-235ENST00000495515 ZFYP08048 801 aaPredicted RBP20.68■□□□□ 0.9
HDAC6-235ENST00000495515 TNNI2P48788 182 aa20.68■□□□□ 0.9
HDAC6-235ENST00000495515 FSD1Q9BTV5 496 aa20.68■□□□□ 0.9
HDAC6-235ENST00000495515 ADAMTSL1Q8N6G6 1762 aa20.67■□□□□ 0.9
HDAC6-235ENST00000495515 TRIM6-TRIM34B2RNG4 842 aa20.67■□□□□ 0.9
HDAC6-235ENST00000495515 ADD2P35612 726 aa20.67■□□□□ 0.9
HDAC6-235ENST00000495515 APLP1P51693 650 aa20.67■□□□□ 0.9
HDAC6-235ENST00000495515 UBE3CQ15386 1083 aa20.67■□□□□ 0.9
HDAC6-235ENST00000495515 FKBP1CQ5VVH2 108 aa20.67■□□□□ 0.9
HDAC6-235ENST00000495515 CDC42EP5Q6NZY7 148 aa20.67■□□□□ 0.9
HDAC6-235ENST00000495515 TICAM2Q86XR7 235 aa20.67■□□□□ 0.9
HDAC6-235ENST00000495515 PPP4CP60510 307 aa20.66■□□□□ 0.9
HDAC6-235ENST00000495515 USP48Q86UV5 1035 aa20.66■□□□□ 0.9
HDAC6-235ENST00000495515 GLIS2Q9BZE0 524 aaPredicted RBP20.66■□□□□ 0.9
HDAC6-235ENST00000495515 PPP2R3BQ9Y5P8 575 aa20.66■□□□□ 0.9
HDAC6-235ENST00000495515 ZNF532Q9HCE3 1301 aa20.66■□□□□ 0.9
HDAC6-235ENST00000495515 RNF113AO15541 343 aaKnown RBP20.65■□□□□ 0.9
HDAC6-235ENST00000495515 RILPL2Q969X0 211 aa20.65■□□□□ 0.9
HDAC6-235ENST00000495515 AATFQ9NY61 560 aaKnown RBP eCLIP20.65■□□□□ 0.9
HDAC6-235ENST00000495515 MAST2Q6P0Q8 1798 aa20.64■□□□□ 0.9
HDAC6-235ENST00000495515 ITGBL1O95965 494 aaPredicted RBP20.64■□□□□ 0.89
HDAC6-235ENST00000495515 TTC22Q5TAA0 569 aa20.64■□□□□ 0.89
HDAC6-235ENST00000495515 ADGRA1Q86SQ6 560 aa20.64■□□□□ 0.89
HDAC6-235ENST00000495515 DEFB129Q9H1M3 183 aa20.64■□□□□ 0.89
HDAC6-235ENST00000495515 CEP350Q5VT06 3117 aa20.63■□□□□ 0.89
HDAC6-235ENST00000495515 MAGEB6P1A0A0J9YX57 407 aa20.63■□□□□ 0.89
HDAC6-235ENST00000495515 TCRBV5S4A2TA0A5A2 114 aa20.63■□□□□ 0.89
HDAC6-235ENST00000495515 TCP10L2B9ZVM9 353 aa20.63■□□□□ 0.89
HDAC6-235ENST00000495515 ADM5C9JUS6 153 aa20.63■□□□□ 0.89
HDAC6-235ENST00000495515 FAM83AQ86UY5 434 aa20.63■□□□□ 0.89
HDAC6-235ENST00000495515 TEX11Q8IYF3 940 aa20.63■□□□□ 0.89
HDAC6-235ENST00000495515 MIGA1Q8NAN2 632 aa20.63■□□□□ 0.89
HDAC6-235ENST00000495515 IDI2Q9BXS1 227 aa20.63■□□□□ 0.89
HDAC6-235ENST00000495515 NF2P35240 595 aa20.62■□□□□ 0.89
HDAC6-235ENST00000495515 CACNB3P54284 484 aa20.62■□□□□ 0.89
HDAC6-235ENST00000495515 RHBDL3P58872 404 aa20.62■□□□□ 0.89
HDAC6-235ENST00000495515 RASA3Q14644 834 aa20.62■□□□□ 0.89
HDAC6-235ENST00000495515 APPBP2Q92624 585 aa20.62■□□□□ 0.89
HDAC6-235ENST00000495515 DOCK2Q92608 1830 aa20.62■□□□□ 0.89
HDAC6-235ENST00000495515 RFX7Q2KHR2 1363 aa20.61■□□□□ 0.89
HDAC6-235ENST00000495515 MYH2Q9UKX2 1941 aa20.61■□□□□ 0.89
HDAC6-235ENST00000495515 ENTPD3O75355 529 aa20.61■□□□□ 0.89
HDAC6-235ENST00000495515 NPM3O75607 178 aaKnown RBP20.61■□□□□ 0.89
HDAC6-235ENST00000495515 AIDAQ96BJ3 306 aa20.61■□□□□ 0.89
HDAC6-235ENST00000495515 PASKQ96RG2 1323 aa20.6■□□□□ 0.89
HDAC6-235ENST00000495515 HIP1O00291 1037 aa20.6■□□□□ 0.89
HDAC6-235ENST00000495515 TRAF5O00463 557 aa20.6■□□□□ 0.89
HDAC6-235ENST00000495515 WDHD1O75717 1129 aaPredicted RBP20.6■□□□□ 0.89
HDAC6-235ENST00000495515 RGS3P49796 1198 aa20.6■□□□□ 0.89
HDAC6-235ENST00000495515 SUPT20HL1Q3ZLR7 823 aa20.6■□□□□ 0.89
HDAC6-235ENST00000495515 SH3RF3Q8TEJ3 882 aaPredicted RBP20.6■□□□□ 0.89
HDAC6-235ENST00000495515 FAM151AQ8WW52 585 aa20.6■□□□□ 0.89
HDAC6-235ENST00000495515 CDCA5Q96FF9 252 aa20.6■□□□□ 0.89
HDAC6-235ENST00000495515 CRNKL1Q9BZJ0 848 aaKnown RBP20.6■□□□□ 0.89
HDAC6-235ENST00000495515 SCAF8Q9UPN6 1271 aaKnown RBP20.6■□□□□ 0.89
HDAC6-235ENST00000495515 DYNLL1P63167 89 aaKnown RBP20.59■□□□□ 0.89
HDAC6-235ENST00000495515 NFIAQ12857 509 aa20.59■□□□□ 0.89
HDAC6-235ENST00000495515 PICALMQ13492 652 aa20.59■□□□□ 0.89
HDAC6-235ENST00000495515 HOOK2Q96ED9 719 aa20.59■□□□□ 0.89
HDAC6-235ENST00000495515 RIOK1Q9BRS2 568 aaKnown RBP20.59■□□□□ 0.89
HDAC6-235ENST00000495515 MBD4O95243 580 aa20.58■□□□□ 0.89
HDAC6-235ENST00000495515 GSPT1P15170 499 aaKnown RBP20.58■□□□□ 0.89
HDAC6-235ENST00000495515 USP5P45974 858 aa20.58■□□□□ 0.89
HDAC6-235ENST00000495515 TCP10Q12799 353 aa20.58■□□□□ 0.89
HDAC6-235ENST00000495515 ZNF408Q9H9D4 720 aa20.58■□□□□ 0.89
HDAC6-235ENST00000495515 FAM198AQ9UFP1 575 aa20.58■□□□□ 0.89
HDAC6-235ENST00000495515 CELF2O95319 508 aaKnown RBP20.57■□□□□ 0.88
HDAC6-235ENST00000495515 SDSP20132 328 aa20.57■□□□□ 0.88
HDAC6-235ENST00000495515 ZMYM1Q5SVZ6 1142 aa20.57■□□□□ 0.88
HDAC6-235ENST00000495515 ZSCAN29Q8IWY8 852 aaPredicted RBP20.57■□□□□ 0.88
HDAC6-235ENST00000495515 TGFBRAP1Q8WUH2 860 aa20.57■□□□□ 0.88
HDAC6-235ENST00000495515 TMEM39BQ9GZU3 492 aa20.57■□□□□ 0.88
HDAC6-235ENST00000495515 PUS7LQ9H0K6 701 aaKnown RBP20.57■□□□□ 0.88
HDAC6-235ENST00000495515 DIAPH3Q9NSV4 1193 aa20.57■□□□□ 0.88
HDAC6-235ENST00000495515 ECM29Q5VYK3 1845 aa20.57■□□□□ 0.88
HDAC6-235ENST00000495515 CNTNAP1P78357 1384 aa20.57■□□□□ 0.88
HDAC6-235ENST00000495515 RPAP1Q9BWH6 1393 aaPredicted RBP20.57■□□□□ 0.88
HDAC6-235ENST00000495515 CHGBP05060 677 aa20.56■□□□□ 0.88
HDAC6-235ENST00000495515 SLFNL1Q499Z3 407 aa20.56■□□□□ 0.88
HDAC6-235ENST00000495515 PRAMEF18Q5VWM3 479 aa20.56■□□□□ 0.88
HDAC6-235ENST00000495515 LCORLQ8N3X6 602 aa20.56■□□□□ 0.88
HDAC6-235ENST00000495515 OSBP2Q969R2 916 aa20.56■□□□□ 0.88
HDAC6-235ENST00000495515 DDRGK1Q96HY6 314 aa20.56■□□□□ 0.88
HDAC6-235ENST00000495515 ARMT1Q9H993 441 aa20.56■□□□□ 0.88
HDAC6-235ENST00000495515 HELLSQ9NRZ9 838 aa20.56■□□□□ 0.88
HDAC6-235ENST00000495515 MYO5AQ9Y4I1 1855 aaKnown RBP20.56■□□□□ 0.88
HDAC6-235ENST00000495515 TMEM88BA6NKF7 163 aa20.55■□□□□ 0.88
HDAC6-235ENST00000495515 GNAT2P19087 354 aa20.55■□□□□ 0.88
HDAC6-235ENST00000495515 BMP2KLQ5H9B9 411 aa20.55■□□□□ 0.88
HDAC6-235ENST00000495515 MAPKAPK5Q8IW41 473 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 198.6 ms