RNA–Protein interactions for RNA: ENST00000495355.1

YIPF4-204, Transcript of Yip1 domain family member 4, humanhuman

TSL 2

Gene YIPF4, Length 544 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4-204ENST00000495355 SRGAP3O43295 1099 aa22.43■■□□□ 1.18
YIPF4-204ENST00000495355 GNAI3P08754 354 aa22.43■■□□□ 1.18
YIPF4-204ENST00000495355 RASGRF1Q13972 1273 aa22.43■■□□□ 1.18
YIPF4-204ENST00000495355 ZKSCAN4Q969J2 545 aaPredicted RBP22.43■■□□□ 1.18
YIPF4-204ENST00000495355 TMOD2Q9NZR1 351 aa22.43■■□□□ 1.18
YIPF4-204ENST00000495355 FAM198AQ9UFP1 575 aa22.43■■□□□ 1.18
YIPF4-204ENST00000495355 MYH2Q9UKX2 1941 aa22.43■■□□□ 1.18
YIPF4-204ENST00000495355 RFX7Q2KHR2 1363 aa22.42■■□□□ 1.18
YIPF4-204ENST00000495355 SEMA3EO15041 775 aa22.42■■□□□ 1.18
YIPF4-204ENST00000495355 TFCP2Q12800 502 aa22.42■■□□□ 1.18
YIPF4-204ENST00000495355 OTUD5Q96G74 571 aa22.42■■□□□ 1.18
YIPF4-204ENST00000495355 WRNIP1Q96S55 665 aa22.42■■□□□ 1.18
YIPF4-204ENST00000495355 DENND2AQ9ULE3 1009 aa22.42■■□□□ 1.18
YIPF4-204ENST00000495355 HDAC5Q9UQL6 1122 aa22.42■■□□□ 1.18
YIPF4-204ENST00000495355 PNMA6EA0A0J9YXQ4 647 aa22.41■■□□□ 1.18
YIPF4-204ENST00000495355 A0A1B0GUL7 405 aa22.41■■□□□ 1.18
YIPF4-204ENST00000495355 LDHBP07195 334 aaKnown RBP22.41■■□□□ 1.18
YIPF4-204ENST00000495355 OTOP1Q7RTM1 612 aa22.41■■□□□ 1.18
YIPF4-204ENST00000495355 ZFPM1Q8IX07 1006 aa22.41■■□□□ 1.18
YIPF4-204ENST00000495355 MIER1Q8N108 512 aa22.41■■□□□ 1.18
YIPF4-204ENST00000495355 FAM43AQ8N2R8 423 aa22.41■■□□□ 1.18
YIPF4-204ENST00000495355 FAM151AQ8WW52 585 aa22.41■■□□□ 1.18
YIPF4-204ENST00000495355 CLUAP1Q96AJ1 413 aa22.41■■□□□ 1.18
YIPF4-204ENST00000495355 CENPFP49454 3210 aa22.41■■□□□ 1.18
YIPF4-204ENST00000495355 ATRNL1Q5VV63 1379 aa22.4■■□□□ 1.18
YIPF4-204ENST00000495355 GAKO14976 1311 aa22.4■■□□□ 1.18
YIPF4-204ENST00000495355 CCL15-CCL14A0A0B4J2E2 113 aa22.4■■□□□ 1.18
YIPF4-204ENST00000495355 TCP10Q12799 353 aa22.4■■□□□ 1.18
YIPF4-204ENST00000495355 CCL15Q16663 113 aa22.4■■□□□ 1.18
YIPF4-204ENST00000495355 MIGA2Q7L4E1 593 aa22.4■■□□□ 1.18
YIPF4-204ENST00000495355 CD99L2Q8TCZ2 262 aa22.4■■□□□ 1.18
YIPF4-204ENST00000495355 FRAT1Q92837 279 aaPredicted RBP22.4■■□□□ 1.18
YIPF4-204ENST00000495355 XAGE2Q96GT9 111 aa22.4■■□□□ 1.18
YIPF4-204ENST00000495355 GNL3LQ9NVN8 582 aaKnown RBP22.4■■□□□ 1.18
YIPF4-204ENST00000495355 CSADQ9Y600 493 aa22.4■■□□□ 1.18
YIPF4-204ENST00000495355 INPP5BP32019 993 aa22.39■■□□□ 1.17
YIPF4-204ENST00000495355 TMEM57Q8N5G2 664 aa22.39■■□□□ 1.17
YIPF4-204ENST00000495355 ZNF384Q8TF68 577 aa22.39■■□□□ 1.17
YIPF4-204ENST00000495355 TRIM17Q9Y577 477 aa22.39■■□□□ 1.17
YIPF4-204ENST00000495355 ZSWIM8A7E2V4 1837 aa22.38■■□□□ 1.17
YIPF4-204ENST00000495355 PDS5AQ29RF7 1337 aaKnown RBP22.38■■□□□ 1.17
YIPF4-204ENST00000495355 IRF6O14896 467 aa22.38■■□□□ 1.17
YIPF4-204ENST00000495355 GTF2A2P52657 109 aa22.38■■□□□ 1.17
YIPF4-204ENST00000495355 ERO1BQ86YB8 467 aa22.38■■□□□ 1.17
YIPF4-204ENST00000495355 ZNF112Q9UJU3 913 aa22.38■■□□□ 1.17
YIPF4-204ENST00000495355 DOCK2Q92608 1830 aa22.38■■□□□ 1.17
YIPF4-204ENST00000495355 BRCA2P51587 3418 aa22.37■■□□□ 1.17
YIPF4-204ENST00000495355 IPO8O15397 1037 aaKnown RBP22.37■■□□□ 1.17
YIPF4-204ENST00000495355 OTUD7BQ6GQQ9 843 aa22.37■■□□□ 1.17
YIPF4-204ENST00000495355 USP40Q9NVE5 1235 aa22.37■■□□□ 1.17
YIPF4-204ENST00000495355 PDE4DIPQ5VU43 2346 aa22.37■■□□□ 1.17
YIPF4-204ENST00000495355 GNAI2P04899 355 aa22.36■■□□□ 1.17
YIPF4-204ENST00000495355 HOXD11P31277 338 aaPredicted RBP22.36■■□□□ 1.17
YIPF4-204ENST00000495355 PI16Q6UXB8 463 aa22.36■■□□□ 1.17
YIPF4-204ENST00000495355 SH3BP5LQ7L8J4 393 aa22.36■■□□□ 1.17
YIPF4-204ENST00000495355 ZNF341Q9BYN7 854 aa22.36■■□□□ 1.17
YIPF4-204ENST00000495355 AK9Q5TCS8 1911 aa22.35■■□□□ 1.17
YIPF4-204ENST00000495355 SLURP2P0DP57 97 aa22.35■■□□□ 1.17
YIPF4-204ENST00000495355 SP3Q02447 781 aa22.35■■□□□ 1.17
YIPF4-204ENST00000495355 PPIL2Q13356 520 aa22.35■■□□□ 1.17
YIPF4-204ENST00000495355 DCAF15Q66K64 600 aa22.35■■□□□ 1.17
YIPF4-204ENST00000495355 BTBD19C9JJ37 291 aa22.34■■□□□ 1.17
YIPF4-204ENST00000495355 HNRNPUQ00839 825 aaKnown RBP eCLIP22.34■■□□□ 1.17
YIPF4-204ENST00000495355 TAF1CQ15572 869 aaPredicted RBP22.34■■□□□ 1.17
YIPF4-204ENST00000495355 HOOK2Q96ED9 719 aa22.34■■□□□ 1.17
YIPF4-204ENST00000495355 ERO1AQ96HE7 468 aa22.34■■□□□ 1.17
YIPF4-204ENST00000495355 IDI2Q9BXS1 227 aa22.34■■□□□ 1.17
YIPF4-204ENST00000495355 DDX4Q9NQI0 724 aaKnown RBP22.34■■□□□ 1.17
YIPF4-204ENST00000495355 HMG20BQ9P0W2 317 aa22.34■■□□□ 1.17
YIPF4-204ENST00000495355 AKAP2Q9Y2D5 859 aa22.34■■□□□ 1.17
YIPF4-204ENST00000495355 PTPN22Q9Y2R2 807 aa22.34■■□□□ 1.17
YIPF4-204ENST00000495355 WDHD1O75717 1129 aaPredicted RBP22.33■■□□□ 1.17
YIPF4-204ENST00000495355 RLBP1P12271 317 aa22.33■■□□□ 1.17
YIPF4-204ENST00000495355 RGS3P49796 1198 aa22.33■■□□□ 1.17
YIPF4-204ENST00000495355 MOGSQ13724 837 aa22.33■■□□□ 1.17
YIPF4-204ENST00000495355 POLA2Q14181 598 aa22.33■■□□□ 1.17
YIPF4-204ENST00000495355 MVPQ14764 893 aaKnown RBP22.33■■□□□ 1.17
YIPF4-204ENST00000495355 ZKSCAN2Q63HK3 967 aa22.33■■□□□ 1.17
YIPF4-204ENST00000495355 FAM163AQ96GL9 167 aaPredicted RBP22.33■■□□□ 1.17
YIPF4-204ENST00000495355 ABCF2Q9UG63 623 aa22.33■■□□□ 1.17
YIPF4-204ENST00000495355 CETPP11597 493 aa22.32■■□□□ 1.16
YIPF4-204ENST00000495355 PPATQ06203 517 aa22.32■■□□□ 1.16
YIPF4-204ENST00000495355 NOL9Q5SY16 702 aaKnown RBP22.32■■□□□ 1.16
YIPF4-204ENST00000495355 ZGPATQ8N5A5 531 aaKnown RBP22.32■■□□□ 1.16
YIPF4-204ENST00000495355 MKI67P46013 3256 aaKnown RBP22.32■■□□□ 1.16
YIPF4-204ENST00000495355 MROH7-TTC4A0A0A0MT08 1334 aa22.31■■□□□ 1.16
YIPF4-204ENST00000495355 RBBP6Q7Z6E9 1792 aaKnown RBP22.31■■□□□ 1.16
YIPF4-204ENST00000495355 PHF20L1A8MW92 1017 aa22.31■■□□□ 1.16
YIPF4-204ENST00000495355 ARID4AP29374 1257 aaPredicted RBP22.31■■□□□ 1.16
YIPF4-204ENST00000495355 RHBDL3P58872 404 aa22.31■■□□□ 1.16
YIPF4-204ENST00000495355 MECOMQ03112 1051 aa22.31■■□□□ 1.16
YIPF4-204ENST00000495355 SNAPC2Q13487 334 aa22.31■■□□□ 1.16
YIPF4-204ENST00000495355 DZIP1Q86YF9 867 aaKnown RBP22.31■■□□□ 1.16
YIPF4-204ENST00000495355 NEUROD6Q96NK8 337 aa22.31■■□□□ 1.16
YIPF4-204ENST00000495355 EFCC1Q9HA90 598 aa22.31■■□□□ 1.16
YIPF4-204ENST00000495355 ZFYVE28Q9HCC9 887 aa22.31■■□□□ 1.16
YIPF4-204ENST00000495355 KCNH4Q9UQ05 1017 aa22.31■■□□□ 1.16
YIPF4-204ENST00000495355 DDTLA6NHG4 134 aaPredicted RBP22.3■■□□□ 1.16
YIPF4-204ENST00000495355 ENTPD3O75355 529 aa22.3■■□□□ 1.16
YIPF4-204ENST00000495355 MCAMP43121 646 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms