RNA–Protein interactions for RNA: ENST00000495190.1

VPS8-226, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 756 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-226ENST00000495190 GREM1O60565 184 aa9.42□□□□□ -0.9
VPS8-226ENST00000495190 TRIM37O94972 964 aa9.42□□□□□ -0.9
VPS8-226ENST00000495190 EIF4A3P38919 411 aaKnown RBP9.42□□□□□ -0.9
VPS8-226ENST00000495190 LRRC14Q15048 493 aa9.42□□□□□ -0.9
VPS8-226ENST00000495190 DUOXA2Q1HG44 320 aa9.42□□□□□ -0.9
VPS8-226ENST00000495190 MAP1SQ66K74 1059 aaPredicted RBP9.42□□□□□ -0.9
VPS8-226ENST00000495190 FBXL19Q6PCT2 694 aa9.42□□□□□ -0.9
VPS8-226ENST00000495190 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.42□□□□□ -0.9
VPS8-226ENST00000495190 TRIM42Q8IWZ5 723 aa9.42□□□□□ -0.9
VPS8-226ENST00000495190 TMEM130Q8N3G9 435 aa9.42□□□□□ -0.9
VPS8-226ENST00000495190 KCNB2Q92953 911 aa9.42□□□□□ -0.9
VPS8-226ENST00000495190 LENG1Q96BZ8 264 aaPredicted RBP9.42□□□□□ -0.9
VPS8-226ENST00000495190 MRPL18Q9H0U6 180 aaKnown RBP9.42□□□□□ -0.9
VPS8-226ENST00000495190 KRT82Q9NSB4 513 aa9.42□□□□□ -0.9
VPS8-226ENST00000495190 STK17AQ9UEE5 414 aa9.42□□□□□ -0.9
VPS8-226ENST00000495190 FAM160A1Q05DH4 1040 aa9.41□□□□□ -0.9
VPS8-226ENST00000495190 SEPT6Q14141 434 aa9.41□□□□□ -0.9
VPS8-226ENST00000495190 ZNF654Q8IZM8 581 aa9.41□□□□□ -0.9
VPS8-226ENST00000495190 GPBAR1Q8TDU6 330 aa9.41□□□□□ -0.9
VPS8-226ENST00000495190 TMPRSS13Q9BYE2 586 aa9.41□□□□□ -0.9
VPS8-226ENST00000495190 ACBD3Q9H3P7 528 aa9.41□□□□□ -0.9
VPS8-226ENST00000495190 MEGF11A6BM72 1044 aa9.4□□□□□ -0.9
VPS8-226ENST00000495190 LIG1P18858 919 aa9.4□□□□□ -0.9
VPS8-226ENST00000495190 GSK3AP49840 483 aa9.4□□□□□ -0.9
VPS8-226ENST00000495190 EXOSC6Q5RKV6 272 aaKnown RBP9.4□□□□□ -0.9
VPS8-226ENST00000495190 CCDC84Q86UT8 332 aaPredicted RBP9.4□□□□□ -0.9
VPS8-226ENST00000495190 ZNF296Q8WUU4 475 aaPredicted RBP9.4□□□□□ -0.9
VPS8-226ENST00000495190 PCDHGC5Q9Y5F6 944 aa9.4□□□□□ -0.9
VPS8-226ENST00000495190 FAM221AA4D161 298 aa9.39□□□□□ -0.91
VPS8-226ENST00000495190 F8W735 103 aaPredicted RBP9.39□□□□□ -0.91
VPS8-226ENST00000495190 TNNI2P48788 182 aa9.39□□□□□ -0.91
VPS8-226ENST00000495190 KIF4BQ2VIQ3 1234 aa9.39□□□□□ -0.91
VPS8-226ENST00000495190 BNC2Q6ZN30 1099 aaPredicted RBP9.39□□□□□ -0.91
VPS8-226ENST00000495190 ACAD11Q709F0 780 aa9.39□□□□□ -0.91
VPS8-226ENST00000495190 WDR18Q9BV38 432 aa9.39□□□□□ -0.91
VPS8-226ENST00000495190 F13A1P00488 732 aa9.38□□□□□ -0.91
VPS8-226ENST00000495190 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.38□□□□□ -0.91
VPS8-226ENST00000495190 ALYREFQ86V81 257 aaKnown RBP9.38□□□□□ -0.91
VPS8-226ENST00000495190 AGGF1Q8N302 714 aaeCLIP9.38□□□□□ -0.91
VPS8-226ENST00000495190 GOLM1Q8NBJ4 401 aa9.38□□□□□ -0.91
VPS8-226ENST00000495190 EAF1Q96JC9 268 aaPredicted RBP9.38□□□□□ -0.91
VPS8-226ENST00000495190 SPON2Q9BUD6 331 aa9.38□□□□□ -0.91
VPS8-226ENST00000495190 MIR1-1HGQ9H1L0 117 aa9.38□□□□□ -0.91
VPS8-226ENST00000495190 SYNGAP1Q96PV0 1343 aa9.37□□□□□ -0.91
VPS8-226ENST00000495190 KRBA1A5PL33 1030 aa9.37□□□□□ -0.91
VPS8-226ENST00000495190 AOC2O75106 756 aa9.37□□□□□ -0.91
VPS8-226ENST00000495190 ALX3O95076 343 aa9.37□□□□□ -0.91
VPS8-226ENST00000495190 CDK8P49336 464 aa9.37□□□□□ -0.91
VPS8-226ENST00000495190 PDE3AQ14432 1141 aa9.37□□□□□ -0.91
VPS8-226ENST00000495190 RUSC1Q9BVN2 902 aa9.37□□□□□ -0.91
VPS8-226ENST00000495190 RNF208Q9H0X6 261 aa9.37□□□□□ -0.91
VPS8-226ENST00000495190 C9orf172C9J069 976 aa9.36□□□□□ -0.91
VPS8-226ENST00000495190 CRKP46108 304 aa9.36□□□□□ -0.91
VPS8-226ENST00000495190 PAK2Q13177 524 aa9.36□□□□□ -0.91
VPS8-226ENST00000495190 Q6ZS46 218 aa9.36□□□□□ -0.91
VPS8-226ENST00000495190 FAM196AQ6ZSG2 479 aa9.36□□□□□ -0.91
VPS8-226ENST00000495190 KIAA0825Q8IV33 1275 aa9.36□□□□□ -0.91
VPS8-226ENST00000495190 SMG8Q8ND04 991 aaKnown RBP9.36□□□□□ -0.91
VPS8-226ENST00000495190 GATAD2BQ8WXI9 593 aa9.36□□□□□ -0.91
VPS8-226ENST00000495190 JARID2Q92833 1246 aaPredicted RBP9.36□□□□□ -0.91
VPS8-226ENST00000495190 DCAF5Q96JK2 942 aa9.36□□□□□ -0.91
VPS8-226ENST00000495190 TINF2Q9BSI4 451 aa9.36□□□□□ -0.91
VPS8-226ENST00000495190 NT5C1AQ9BXI3 368 aa9.36□□□□□ -0.91
VPS8-226ENST00000495190 CCSER2Q9H7U1 834 aa9.36□□□□□ -0.91
VPS8-226ENST00000495190 SUGCTQ9HAC7 445 aa9.36□□□□□ -0.91
VPS8-226ENST00000495190 SUPT16HQ9Y5B9 1047 aaKnown RBP9.36□□□□□ -0.91
VPS8-226ENST00000495190 CILPO75339 1184 aa9.35□□□□□ -0.91
VPS8-226ENST00000495190 RANGAP1P46060 587 aaPredicted RBP9.35□□□□□ -0.91
VPS8-226ENST00000495190 GJA8P48165 433 aa9.35□□□□□ -0.91
VPS8-226ENST00000495190 ZC3H6P61129 1189 aaKnown RBP9.35□□□□□ -0.91
VPS8-226ENST00000495190 ADGRE1Q14246 886 aa9.35□□□□□ -0.91
VPS8-226ENST00000495190 SNAP47Q5SQN1 464 aa9.35□□□□□ -0.91
VPS8-226ENST00000495190 HP1BP3Q5SSJ5 553 aaPredicted RBP9.35□□□□□ -0.91
VPS8-226ENST00000495190 FBXO27Q8NI29 283 aa9.35□□□□□ -0.91
VPS8-226ENST00000495190 UBP1Q9NZI7 540 aa9.35□□□□□ -0.91
VPS8-226ENST00000495190 PPP1R9AQ9ULJ8 1098 aa9.35□□□□□ -0.91
VPS8-226ENST00000495190 RNF225M0QZC1 329 aaPredicted RBP9.34□□□□□ -0.91
VPS8-226ENST00000495190 TIAF1O95411 115 aa9.34□□□□□ -0.91
VPS8-226ENST00000495190 APBA3O96018 575 aa9.34□□□□□ -0.91
VPS8-226ENST00000495190 LMNB1P20700 586 aa9.34□□□□□ -0.91
VPS8-226ENST00000495190 NOS3P29474 1203 aa9.34□□□□□ -0.91
VPS8-226ENST00000495190 INPP5AQ14642 412 aa9.34□□□□□ -0.91
VPS8-226ENST00000495190 MBTPS1Q14703 1052 aa9.34□□□□□ -0.91
VPS8-226ENST00000495190 ZC3H12AQ5D1E8 599 aaKnown RBP9.34□□□□□ -0.91
VPS8-226ENST00000495190 WFDC12Q8WWY7 111 aa9.34□□□□□ -0.91
VPS8-226ENST00000495190 C8orf37Q96NL8 207 aa9.34□□□□□ -0.91
VPS8-226ENST00000495190 NACC1Q96RE7 527 aa9.34□□□□□ -0.91
VPS8-226ENST00000495190 AKTIPQ9H8T0 292 aa9.34□□□□□ -0.91
VPS8-226ENST00000495190 USP21Q9UK80 565 aa9.34□□□□□ -0.91
VPS8-226ENST00000495190 PCDHA4Q9UN74 947 aa9.34□□□□□ -0.91
VPS8-226ENST00000495190 GFRA2O00451 464 aa9.33□□□□□ -0.92
VPS8-226ENST00000495190 CHRNA4P43681 627 aa9.33□□□□□ -0.92
VPS8-226ENST00000495190 NRG1Q02297 640 aaPredicted RBP9.33□□□□□ -0.92
VPS8-226ENST00000495190 KCNMA1Q12791 1236 aa9.33□□□□□ -0.92
VPS8-226ENST00000495190 NUTM2GQ5VZR2 741 aa9.33□□□□□ -0.92
VPS8-226ENST00000495190 ACSBG1Q96GR2 724 aa9.33□□□□□ -0.92
VPS8-226ENST00000495190 LRRC3Q9BY71 257 aa9.33□□□□□ -0.92
VPS8-226ENST00000495190 ROBO2Q9HCK4 1378 aa9.33□□□□□ -0.92
VPS8-226ENST00000495190 TMPRSS2O15393 492 aa9.32□□□□□ -0.92
VPS8-226ENST00000495190 DRD2P14416 443 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms