RNA–Protein interactions for RNA: ENST00000494934.5

SRRM1-218, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-218ENST00000494934 SUPT16HQ9Y5B9 1047 aaKnown RBP8.2□□□□□ -1.1
SRRM1-218ENST00000494934 PCDHB5Q9Y5E4 795 aa8.2□□□□□ -1.1
SRRM1-218ENST00000494934 KRBA1A5PL33 1030 aa8.19□□□□□ -1.1
SRRM1-218ENST00000494934 DDX3YO15523 660 aaKnown RBP8.19□□□□□ -1.1
SRRM1-218ENST00000494934 STK10O94804 968 aaKnown RBP8.19□□□□□ -1.1
SRRM1-218ENST00000494934 RLBP1P12271 317 aa8.19□□□□□ -1.1
SRRM1-218ENST00000494934 SELPP16109 830 aa8.19□□□□□ -1.1
SRRM1-218ENST00000494934 SNAP47Q5SQN1 464 aa8.19□□□□□ -1.1
SRRM1-218ENST00000494934 SHISA2Q6UWI4 295 aa8.19□□□□□ -1.1
SRRM1-218ENST00000494934 FBXO27Q8NI29 283 aa8.19□□□□□ -1.1
SRRM1-218ENST00000494934 WNT8BQ93098 351 aa8.19□□□□□ -1.1
SRRM1-218ENST00000494934 SOX17Q9H6I2 414 aaPredicted RBP8.19□□□□□ -1.1
SRRM1-218ENST00000494934 ZNF408Q9H9D4 720 aa8.19□□□□□ -1.1
SRRM1-218ENST00000494934 OSGEPQ9NPF4 335 aa8.19□□□□□ -1.1
SRRM1-218ENST00000494934 NOP53Q9NZM5 478 aaKnown RBP8.19□□□□□ -1.1
SRRM1-218ENST00000494934 PIK3R2O00459 728 aa8.18□□□□□ -1.1
SRRM1-218ENST00000494934 WISP1O95388 367 aa8.18□□□□□ -1.1
SRRM1-218ENST00000494934 F13A1P00488 732 aa8.18□□□□□ -1.1
SRRM1-218ENST00000494934 BMP6P22004 513 aa8.18□□□□□ -1.1
SRRM1-218ENST00000494934 SOX9P48436 509 aa8.18□□□□□ -1.1
SRRM1-218ENST00000494934 TRIM28Q13263 835 aaKnown RBP8.18□□□□□ -1.1
SRRM1-218ENST00000494934 BNC2Q6ZN30 1099 aaPredicted RBP8.18□□□□□ -1.1
SRRM1-218ENST00000494934 DCAF5Q96JK2 942 aa8.18□□□□□ -1.1
SRRM1-218ENST00000494934 ZFYVE1Q9HBF4 777 aa8.18□□□□□ -1.1
SRRM1-218ENST00000494934 TMEM39AQ9NV64 488 aa8.18□□□□□ -1.1
SRRM1-218ENST00000494934 CTSBP07858 339 aa8.17□□□□□ -1.1
SRRM1-218ENST00000494934 SPATA31C1P0DKV0 1188 aa8.17□□□□□ -1.1
SRRM1-218ENST00000494934 ELNP15502 786 aa8.17□□□□□ -1.1
SRRM1-218ENST00000494934 CABP4P57796 275 aa8.17□□□□□ -1.1
SRRM1-218ENST00000494934 RPS26P62854 115 aaKnown RBP8.17□□□□□ -1.1
SRRM1-218ENST00000494934 C19orf57Q0VDD7 668 aa8.17□□□□□ -1.1
SRRM1-218ENST00000494934 SEPT6Q14141 434 aa8.17□□□□□ -1.1
SRRM1-218ENST00000494934 FAM196AQ6ZSG2 479 aa8.17□□□□□ -1.1
SRRM1-218ENST00000494934 MAP4K3Q8IVH8 894 aa8.17□□□□□ -1.1
SRRM1-218ENST00000494934 TRIM42Q8IWZ5 723 aa8.17□□□□□ -1.1
SRRM1-218ENST00000494934 KLHL23Q8NBE8 558 aa8.17□□□□□ -1.1
SRRM1-218ENST00000494934 SLC7A3Q8WY07 619 aa8.17□□□□□ -1.1
SRRM1-218ENST00000494934 MRVI1Q9Y6F6 885 aa8.17□□□□□ -1.1
SRRM1-218ENST00000494934 TLR3O15455 904 aaKnown RBP8.16□□□□□ -1.1
SRRM1-218ENST00000494934 ECEL1O95672 775 aa8.16□□□□□ -1.1
SRRM1-218ENST00000494934 DLGAP3O95886 979 aa8.16□□□□□ -1.1
SRRM1-218ENST00000494934 RAC1P63000 192 aa8.16□□□□□ -1.1
SRRM1-218ENST00000494934 RASSF7Q02833 373 aa8.16□□□□□ -1.1
SRRM1-218ENST00000494934 APOBRQ0VD83 1088 aa8.16□□□□□ -1.1
SRRM1-218ENST00000494934 GAL3ST3Q96A11 431 aa8.16□□□□□ -1.1
SRRM1-218ENST00000494934 HIRIP3Q9BW71 556 aaPredicted RBP8.16□□□□□ -1.1
SRRM1-218ENST00000494934 SPDYE3A6NKU9 549 aa8.15□□□□□ -1.1
SRRM1-218ENST00000494934 SSBP05455 408 aaKnown RBP eCLIP8.15□□□□□ -1.1
SRRM1-218ENST00000494934 CD68P34810 354 aaPredicted RBP8.15□□□□□ -1.1
SRRM1-218ENST00000494934 ETFBP38117 255 aa8.15□□□□□ -1.1
SRRM1-218ENST00000494934 SERINC3Q13530 473 aa8.15□□□□□ -1.1
SRRM1-218ENST00000494934 SUZ12Q15022 739 aaKnown RBP8.15□□□□□ -1.1
SRRM1-218ENST00000494934 CCDC81Q6ZN84 652 aa8.15□□□□□ -1.1
SRRM1-218ENST00000494934 SULF2Q8IWU5 870 aa8.15□□□□□ -1.1
SRRM1-218ENST00000494934 GRIN3AQ8TCU5 1115 aa8.15□□□□□ -1.1
SRRM1-218ENST00000494934 OSBPL2Q9H1P3 480 aa8.15□□□□□ -1.1
SRRM1-218ENST00000494934 ZSWIM4Q9H7M6 989 aa8.15□□□□□ -1.1
SRRM1-218ENST00000494934 CADPSQ9ULU8 1353 aa8.14□□□□□ -1.11
SRRM1-218ENST00000494934 FAM221AA4D161 298 aa8.14□□□□□ -1.11
SRRM1-218ENST00000494934 NME2P22392 152 aa8.14□□□□□ -1.11
SRRM1-218ENST00000494934 CHRNA4P43681 627 aa8.14□□□□□ -1.11
SRRM1-218ENST00000494934 SEZ6Q53EL9 994 aa8.14□□□□□ -1.11
SRRM1-218ENST00000494934 PRRT3Q5FWE3 981 aa8.14□□□□□ -1.11
SRRM1-218ENST00000494934 FAM117BQ6P1L5 589 aa8.14□□□□□ -1.11
SRRM1-218ENST00000494934 MPRIPQ6WCQ1 1025 aa8.14□□□□□ -1.11
SRRM1-218ENST00000494934 PDZD3Q86UT5 571 aa8.14□□□□□ -1.11
SRRM1-218ENST00000494934 SLITRK4Q8IW52 837 aa8.14□□□□□ -1.11
SRRM1-218ENST00000494934 UBASH3BQ8TF42 649 aa8.14□□□□□ -1.11
SRRM1-218ENST00000494934 NKD1Q969G9 470 aa8.14□□□□□ -1.11
SRRM1-218ENST00000494934 LRRC3Q9BY71 257 aa8.14□□□□□ -1.11
SRRM1-218ENST00000494934 RNF225M0QZC1 329 aaPredicted RBP8.13□□□□□ -1.11
SRRM1-218ENST00000494934 NLRP12P59046 1061 aa8.13□□□□□ -1.11
SRRM1-218ENST00000494934 GSTM4Q03013 218 aa8.13□□□□□ -1.11
SRRM1-218ENST00000494934 PTPN11Q06124 597 aaPredicted RBP8.13□□□□□ -1.11
SRRM1-218ENST00000494934 BMS1Q14692 1282 aaKnown RBP8.13□□□□□ -1.11
SRRM1-218ENST00000494934 IGF2-ASQ6U949 168 aa8.13□□□□□ -1.11
SRRM1-218ENST00000494934 KIAA1211Q6ZU35 1233 aa8.13□□□□□ -1.11
SRRM1-218ENST00000494934 ALYREFQ86V81 257 aaKnown RBP8.13□□□□□ -1.11
SRRM1-218ENST00000494934 HNRNPLLQ8WVV9 542 aaKnown RBP8.13□□□□□ -1.11
SRRM1-218ENST00000494934 LENG1Q96BZ8 264 aaPredicted RBP8.13□□□□□ -1.11
SRRM1-218ENST00000494934 PPT2Q9UMR5 302 aa8.13□□□□□ -1.11
SRRM1-218ENST00000494934 LOC100289279A0A1B0GTE1 492 aa8.12□□□□□ -1.11
SRRM1-218ENST00000494934 FAM177BA6PVY3 158 aa8.12□□□□□ -1.11
SRRM1-218ENST00000494934 PPP2R3AQ06190 1150 aa8.12□□□□□ -1.11
SRRM1-218ENST00000494934 ZNF252P-AS1Q0IIN9 211 aa8.12□□□□□ -1.11
SRRM1-218ENST00000494934 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.12□□□□□ -1.11
SRRM1-218ENST00000494934 NOP9Q86U38 636 aaKnown RBP8.12□□□□□ -1.11
SRRM1-218ENST00000494934 CD163Q86VB7 1156 aa8.12□□□□□ -1.11
SRRM1-218ENST00000494934 GATAD2BQ8WXI9 593 aa8.12□□□□□ -1.11
SRRM1-218ENST00000494934 JARID2Q92833 1246 aaPredicted RBP8.12□□□□□ -1.11
SRRM1-218ENST00000494934 SHDQ96IW2 340 aa8.12□□□□□ -1.11
SRRM1-218ENST00000494934 MIR1-1HGQ9H1L0 117 aa8.12□□□□□ -1.11
SRRM1-218ENST00000494934 KLF4O43474 513 aa8.11□□□□□ -1.11
SRRM1-218ENST00000494934 CILPO75339 1184 aa8.11□□□□□ -1.11
SRRM1-218ENST00000494934 COL9A2Q14055 689 aaPredicted RBP8.11□□□□□ -1.11
SRRM1-218ENST00000494934 ADGRE1Q14246 886 aa8.11□□□□□ -1.11
SRRM1-218ENST00000494934 LLGL2Q6P1M3 1020 aa8.11□□□□□ -1.11
SRRM1-218ENST00000494934 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.11□□□□□ -1.11
SRRM1-218ENST00000494934 ANKS3Q6ZW76 656 aa8.11□□□□□ -1.11
SRRM1-218ENST00000494934 JAZF1Q86VZ6 243 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms