RNA–Protein interactions for RNA: ENST00000494396.5

SYP-208, Transcript of synaptophysin, humanhuman

TSL 2

Gene SYP, Length 2,062 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYP-208ENST00000494396 GORABQ5T7V8 394 aa19.23■□□□□ 0.67
SYP-208ENST00000494396 C11orf57Q6ZUT1 292 aaPredicted RBP19.23■□□□□ 0.67
SYP-208ENST00000494396 DHX40Q8IX18 779 aaKnown RBP19.23■□□□□ 0.67
SYP-208ENST00000494396 PAG1Q9NWQ8 432 aa19.23■□□□□ 0.67
SYP-208ENST00000494396 CCDC158Q5M9N0 1113 aa19.23■□□□□ 0.67
SYP-208ENST00000494396 TICAM2Q86XR7 235 aa19.23■□□□□ 0.67
SYP-208ENST00000494396 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.23■□□□□ 0.67
SYP-208ENST00000494396 ZNF446Q9NWS9 450 aa19.23■□□□□ 0.67
SYP-208ENST00000494396 SRP68Q9UHB9 627 aaKnown RBP19.23■□□□□ 0.67
SYP-208ENST00000494396 C4BP0C0L5 1744 aa19.22■□□□□ 0.67
SYP-208ENST00000494396 PHLPP2Q6ZVD8 1323 aa19.22■□□□□ 0.67
SYP-208ENST00000494396 GOLIM4O00461 696 aa19.22■□□□□ 0.67
SYP-208ENST00000494396 TBC1D9BQ66K14 1250 aa19.22■□□□□ 0.67
SYP-208ENST00000494396 BICDL1Q6ZP65 573 aa19.22■□□□□ 0.67
SYP-208ENST00000494396 DDX60Q8IY21 1712 aaKnown RBP19.22■□□□□ 0.67
SYP-208ENST00000494396 ARHGEF1Q92888 912 aaKnown RBP19.22■□□□□ 0.67
SYP-208ENST00000494396 BRF1Q92994 677 aa19.22■□□□□ 0.67
SYP-208ENST00000494396 XAGE2Q96GT9 111 aa19.22■□□□□ 0.67
SYP-208ENST00000494396 BRWD3Q6RI45 1802 aa19.22■□□□□ 0.67
SYP-208ENST00000494396 LAMB2P55268 1798 aa19.22■□□□□ 0.67
SYP-208ENST00000494396 CCAR1Q8IX12 1150 aaKnown RBP19.21■□□□□ 0.67
SYP-208ENST00000494396 SMARCC2Q8TAQ2 1214 aa19.21■□□□□ 0.67
SYP-208ENST00000494396 SETDB2Q96T68 719 aa19.21■□□□□ 0.67
SYP-208ENST00000494396 FHOD1Q9Y613 1164 aa19.21■□□□□ 0.67
SYP-208ENST00000494396 LRP5O75197 1615 aa19.21■□□□□ 0.67
SYP-208ENST00000494396 MROH5Q6ZUA9 1318 aa19.21■□□□□ 0.67
SYP-208ENST00000494396 CHGBP05060 677 aa19.21■□□□□ 0.67
SYP-208ENST00000494396 HMGB1P09429 215 aaKnown RBP19.21■□□□□ 0.67
SYP-208ENST00000494396 IFIT1P09914 478 aaKnown RBP19.21■□□□□ 0.67
SYP-208ENST00000494396 MCMDC2Q4G0Z9 681 aa19.21■□□□□ 0.67
SYP-208ENST00000494396 SLC27A3Q5K4L6 730 aa19.21■□□□□ 0.67
SYP-208ENST00000494396 TRAPPC3LQ5T215 181 aa19.21■□□□□ 0.67
SYP-208ENST00000494396 TXLNBQ8N3L3 684 aa19.21■□□□□ 0.67
SYP-208ENST00000494396 VGLL2Q8N8G2 317 aa19.21■□□□□ 0.67
SYP-208ENST00000494396 NYXQ9GZU5 481 aa19.21■□□□□ 0.67
SYP-208ENST00000494396 LRRC4BQ9NT99 713 aa19.21■□□□□ 0.67
SYP-208ENST00000494396 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.21■□□□□ 0.67
SYP-208ENST00000494396 V9GYY5 206 aaPredicted RBP19.21■□□□□ 0.67
SYP-208ENST00000494396 TRIM37O94972 964 aa19.2■□□□□ 0.66
SYP-208ENST00000494396 ERFEQ4G0M1 354 aa19.2■□□□□ 0.66
SYP-208ENST00000494396 ENGASEQ8NFI3 743 aa19.2■□□□□ 0.66
SYP-208ENST00000494396 MPHOSPH8Q99549 860 aa19.2■□□□□ 0.66
SYP-208ENST00000494396 PDE8BO95263 885 aa19.2■□□□□ 0.66
SYP-208ENST00000494396 SFPQP23246 707 aaKnown RBP eCLIP19.2■□□□□ 0.66
SYP-208ENST00000494396 ADORA1P30542 326 aa19.2■□□□□ 0.66
SYP-208ENST00000494396 RFC4P35249 363 aa19.2■□□□□ 0.66
SYP-208ENST00000494396 TTC39AQ5SRH9 613 aa19.2■□□□□ 0.66
SYP-208ENST00000494396 AMIGO3Q86WK7 504 aa19.2■□□□□ 0.66
SYP-208ENST00000494396 ABCC12Q96J65 1359 aa19.19■□□□□ 0.66
SYP-208ENST00000494396 ZRANB2O95218 330 aaKnown RBP eCLIP19.19■□□□□ 0.66
SYP-208ENST00000494396 PNMA6AP0CW24 399 aaPredicted RBP19.19■□□□□ 0.66
SYP-208ENST00000494396 ADRA2BP18089 450 aa19.19■□□□□ 0.66
SYP-208ENST00000494396 ADD1P35611 737 aaKnown RBP19.19■□□□□ 0.66
SYP-208ENST00000494396 MUM1L1Q5H9M0 696 aa19.19■□□□□ 0.66
SYP-208ENST00000494396 E4F1Q66K89 784 aaPredicted RBP19.19■□□□□ 0.66
SYP-208ENST00000494396 TMCO3Q6UWJ1 677 aa19.19■□□□□ 0.66
SYP-208ENST00000494396 PPP1R13BQ96KQ4 1090 aa19.19■□□□□ 0.66
SYP-208ENST00000494396 SEC62Q99442 399 aaKnown RBP19.19■□□□□ 0.66
SYP-208ENST00000494396 SEC31BQ9NQW1 1179 aa19.19■□□□□ 0.66
SYP-208ENST00000494396 TRMT1Q9NXH9 659 aaKnown RBP19.19■□□□□ 0.66
SYP-208ENST00000494396 IGHMBP2P38935 993 aaKnown RBP19.18■□□□□ 0.66
SYP-208ENST00000494396 CLCN6P51797 869 aa19.18■□□□□ 0.66
SYP-208ENST00000494396 GPS2Q13227 327 aa19.18■□□□□ 0.66
SYP-208ENST00000494396 CCDC129Q6ZRS4 1044 aa19.18■□□□□ 0.66
SYP-208ENST00000494396 FCHSD1Q86WN1 690 aa19.18■□□□□ 0.66
SYP-208ENST00000494396 NEK1Q96PY6 1258 aa19.18■□□□□ 0.66
SYP-208ENST00000494396 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.18■□□□□ 0.66
SYP-208ENST00000494396 U3KPZ7 1027 aaPredicted RBP19.18■□□□□ 0.66
SYP-208ENST00000494396 A0A1W2PQ27 194 aa19.18■□□□□ 0.66
SYP-208ENST00000494396 A0A1W2PQ64 194 aa19.18■□□□□ 0.66
SYP-208ENST00000494396 A0A1W2PQD8 194 aa19.18■□□□□ 0.66
SYP-208ENST00000494396 ARID5BQ14865 1188 aa19.18■□□□□ 0.66
SYP-208ENST00000494396 ZRSR1Q15695 479 aaKnown RBP19.18■□□□□ 0.66
SYP-208ENST00000494396 SLC10A5Q5PT55 438 aa19.18■□□□□ 0.66
SYP-208ENST00000494396 NBPF5PQ86XG9 351 aaPredicted RBP19.18■□□□□ 0.66
SYP-208ENST00000494396 HELLSQ9NRZ9 838 aa19.18■□□□□ 0.66
SYP-208ENST00000494396 EP400Q96L91 3159 aa19.17■□□□□ 0.66
SYP-208ENST00000494396 ETF1P62495 437 aaKnown RBP19.17■□□□□ 0.66
SYP-208ENST00000494396 SF3B3Q15393 1217 aaKnown RBP19.17■□□□□ 0.66
SYP-208ENST00000494396 PUM3Q15397 648 aaKnown RBP19.17■□□□□ 0.66
SYP-208ENST00000494396 ERCC6LQ2NKX8 1250 aa19.17■□□□□ 0.66
SYP-208ENST00000494396 IPO4Q8TEX9 1081 aaKnown RBP19.17■□□□□ 0.66
SYP-208ENST00000494396 UBXN4Q92575 508 aa19.17■□□□□ 0.66
SYP-208ENST00000494396 CDC5LQ99459 802 aaKnown RBP19.17■□□□□ 0.66
SYP-208ENST00000494396 EFCAB8A8MWE9 144 aa19.16■□□□□ 0.66
SYP-208ENST00000494396 MYO1BO43795 1136 aa19.16■□□□□ 0.66
SYP-208ENST00000494396 PFKFB2O60825 505 aa19.16■□□□□ 0.66
SYP-208ENST00000494396 HMGB2P26583 209 aaKnown RBP19.16■□□□□ 0.66
SYP-208ENST00000494396 NBPF11Q86T75 865 aa19.16■□□□□ 0.66
SYP-208ENST00000494396 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.16■□□□□ 0.66
SYP-208ENST00000494396 TAF6LQ9Y6J9 622 aa19.16■□□□□ 0.66
SYP-208ENST00000494396 ZMYM1Q5SVZ6 1142 aa19.16■□□□□ 0.66
SYP-208ENST00000494396 TPTE2Q6XPS3 522 aa19.16■□□□□ 0.66
SYP-208ENST00000494396 AOPEPQ8N6M6 819 aa19.16■□□□□ 0.66
SYP-208ENST00000494396 LPIN2Q92539 896 aa19.16■□□□□ 0.66
SYP-208ENST00000494396 ARHGAP29Q52LW3 1261 aa19.15■□□□□ 0.66
SYP-208ENST00000494396 COL24A1Q17RW2 1714 aa19.15■□□□□ 0.66
SYP-208ENST00000494396 RNF113AO15541 343 aaKnown RBP19.15■□□□□ 0.66
SYP-208ENST00000494396 FKBP4Q02790 459 aaKnown RBP eCLIP19.15■□□□□ 0.66
SYP-208ENST00000494396 ADALQ6DHV7 355 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms