RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 STAG2Q8N3U4 1231 aa7.52□□□□□ -1.21
CPSF7-213ENST00000494016 SCG3Q8WXD2 468 aaKnown RBP7.52□□□□□ -1.21
CPSF7-213ENST00000494016 NANOS1Q8WY41 292 aaKnown RBP7.52□□□□□ -1.21
CPSF7-213ENST00000494016 LRRC59Q96AG4 307 aaKnown RBP7.52□□□□□ -1.21
CPSF7-213ENST00000494016 C8orf37Q96NL8 207 aa7.52□□□□□ -1.21
CPSF7-213ENST00000494016 GAS2L1Q99501 681 aaPredicted RBP7.52□□□□□ -1.21
CPSF7-213ENST00000494016 CHMP4AQ9BY43 222 aa7.52□□□□□ -1.21
CPSF7-213ENST00000494016 LGR6Q9HBX8 967 aa7.52□□□□□ -1.21
CPSF7-213ENST00000494016 CUEDC1Q9NWM3 386 aaPredicted RBP7.52□□□□□ -1.21
CPSF7-213ENST00000494016 PTPRCP08575 1304 aa7.52□□□□□ -1.21
CPSF7-213ENST00000494016 MAP3K5Q99683 1374 aa7.51□□□□□ -1.21
CPSF7-213ENST00000494016 SERTM1A2A2V5 107 aa7.51□□□□□ -1.21
CPSF7-213ENST00000494016 EML1O00423 815 aa7.51□□□□□ -1.21
CPSF7-213ENST00000494016 PPP1R12BO60237 982 aaPredicted RBP7.51□□□□□ -1.21
CPSF7-213ENST00000494016 LGR5O75473 907 aa7.51□□□□□ -1.21
CPSF7-213ENST00000494016 ADAMTS2O95450 1211 aa7.51□□□□□ -1.21
CPSF7-213ENST00000494016 VSIG8P0DPA2 414 aa7.51□□□□□ -1.21
CPSF7-213ENST00000494016 WEE1P30291 646 aa7.51□□□□□ -1.21
CPSF7-213ENST00000494016 HIRAP54198 1017 aaPredicted RBP7.51□□□□□ -1.21
CPSF7-213ENST00000494016 KCNMA1Q12791 1236 aa7.51□□□□□ -1.21
CPSF7-213ENST00000494016 CHD1LQ86WJ1 897 aa7.51□□□□□ -1.21
CPSF7-213ENST00000494016 C1orf216Q8TAB5 229 aa7.51□□□□□ -1.21
CPSF7-213ENST00000494016 GMCL1Q96IK5 515 aa7.51□□□□□ -1.21
CPSF7-213ENST00000494016 ZDHHC3Q9NYG2 299 aa7.51□□□□□ -1.21
CPSF7-213ENST00000494016 PARP3Q9Y6F1 533 aa7.51□□□□□ -1.21
CPSF7-213ENST00000494016 NRAPQ86VF7 1730 aa7.51□□□□□ -1.21
CPSF7-213ENST00000494016 EP400Q96L91 3159 aa7.51□□□□□ -1.21
CPSF7-213ENST00000494016 NCAPD2Q15021 1401 aa7.51□□□□□ -1.21
CPSF7-213ENST00000494016 TNS3Q68CZ2 1445 aa7.51□□□□□ -1.21
CPSF7-213ENST00000494016 RGPD5Q99666 1765 aa7.51□□□□□ -1.21
CPSF7-213ENST00000494016 NPHP3Q7Z494 1330 aa7.51□□□□□ -1.21
CPSF7-213ENST00000494016 CEMIPQ8WUJ3 1361 aa7.5□□□□□ -1.21
CPSF7-213ENST00000494016 ATP4AP20648 1035 aa7.5□□□□□ -1.21
CPSF7-213ENST00000494016 PLEKHO1Q53GL0 409 aaPredicted RBP7.5□□□□□ -1.21
CPSF7-213ENST00000494016 RIPOR1Q6ZS17 1223 aa7.5□□□□□ -1.21
CPSF7-213ENST00000494016 TRIM22Q8IYM9 498 aa7.5□□□□□ -1.21
CPSF7-213ENST00000494016 ANKRD44Q8N8A2 993 aa7.5□□□□□ -1.21
CPSF7-213ENST00000494016 ANKRD24Q8TF21 1146 aa7.5□□□□□ -1.21
CPSF7-213ENST00000494016 AIDAQ96BJ3 306 aa7.5□□□□□ -1.21
CPSF7-213ENST00000494016 GCC1Q96CN9 775 aa7.5□□□□□ -1.21
CPSF7-213ENST00000494016 NGLY1Q96IV0 654 aa7.5□□□□□ -1.21
CPSF7-213ENST00000494016 C2orf49Q9BVC5 232 aaPredicted RBP7.5□□□□□ -1.21
CPSF7-213ENST00000494016 DCTPP1Q9H773 170 aa7.5□□□□□ -1.21
CPSF7-213ENST00000494016 GPAMQ9HCL2 828 aa7.5□□□□□ -1.21
CPSF7-213ENST00000494016 CHMP3Q9Y3E7 222 aa7.5□□□□□ -1.21
CPSF7-213ENST00000494016 GLI3P10071 1580 aa7.5□□□□□ -1.21
CPSF7-213ENST00000494016 SOS1Q07889 1333 aaPredicted RBP7.5□□□□□ -1.21
CPSF7-213ENST00000494016 CACNA1FO60840 1977 aa7.5□□□□□ -1.21
CPSF7-213ENST00000494016 LMO7Q8WWI1 1683 aa7.49□□□□□ -1.21
CPSF7-213ENST00000494016 H7C1W4 665 aa7.49□□□□□ -1.21
CPSF7-213ENST00000494016 TXLNAP40222 546 aa7.49□□□□□ -1.21
CPSF7-213ENST00000494016 EIF4A1P60842 406 aaKnown RBP7.49□□□□□ -1.21
CPSF7-213ENST00000494016 DBN1Q16643 649 aa7.49□□□□□ -1.21
CPSF7-213ENST00000494016 SH3PXD2AQ5TCZ1 1133 aa7.49□□□□□ -1.21
CPSF7-213ENST00000494016 ANKRD45Q5TZF3 282 aa7.49□□□□□ -1.21
CPSF7-213ENST00000494016 CCDC30Q5VVM6 783 aa7.49□□□□□ -1.21
CPSF7-213ENST00000494016 RPAP2Q8IXW5 612 aaPredicted RBP7.49□□□□□ -1.21
CPSF7-213ENST00000494016 VWA5B2Q8N398 1253 aa7.49□□□□□ -1.21
CPSF7-213ENST00000494016 CLP1Q92989 425 aaKnown RBP7.49□□□□□ -1.21
CPSF7-213ENST00000494016 LNPKQ9C0E8 428 aa7.49□□□□□ -1.21
CPSF7-213ENST00000494016 CRISPLD1Q9H336 500 aa7.49□□□□□ -1.21
CPSF7-213ENST00000494016 ZNF232Q9UNY5 417 aa7.49□□□□□ -1.21
CPSF7-213ENST00000494016 ATRNO75882 1429 aa7.49□□□□□ -1.21
CPSF7-213ENST00000494016 BCL9LQ86UU0 1499 aa7.49□□□□□ -1.21
CPSF7-213ENST00000494016 COL18A1P39060 1754 aa7.48□□□□□ -1.21
CPSF7-213ENST00000494016 TMEM88BA6NKF7 163 aa7.48□□□□□ -1.21
CPSF7-213ENST00000494016 F6X3S4 739 aa7.48□□□□□ -1.21
CPSF7-213ENST00000494016 RNMTO43148 476 aaKnown RBP7.48□□□□□ -1.21
CPSF7-213ENST00000494016 KCNQ3O43525 872 aa7.48□□□□□ -1.21
CPSF7-213ENST00000494016 CSB-PGBD3P0DP91 1061 aa7.48□□□□□ -1.21
CPSF7-213ENST00000494016 TATP17735 454 aaPredicted RBP7.48□□□□□ -1.21
CPSF7-213ENST00000494016 ZC3H6P61129 1189 aaKnown RBP7.48□□□□□ -1.21
CPSF7-213ENST00000494016 LBRQ14739 615 aaKnown RBP7.48□□□□□ -1.21
CPSF7-213ENST00000494016 OCLNQ16625 522 aa7.48□□□□□ -1.21
CPSF7-213ENST00000494016 AMOTQ4VCS5 1084 aa7.48□□□□□ -1.21
CPSF7-213ENST00000494016 AKAP4Q5JQC9 854 aa7.48□□□□□ -1.21
CPSF7-213ENST00000494016 SV2AQ7L0J3 742 aa7.48□□□□□ -1.21
CPSF7-213ENST00000494016 TMEM151AQ8N4L1 468 aa7.48□□□□□ -1.21
CPSF7-213ENST00000494016 ZNF837Q96EG3 531 aaPredicted RBP7.48□□□□□ -1.21
CPSF7-213ENST00000494016 MEIS3Q99687 375 aa7.48□□□□□ -1.21
CPSF7-213ENST00000494016 NWD2Q9ULI1 1742 aa7.48□□□□□ -1.21
CPSF7-213ENST00000494016 SPATA31A3Q5VYP0 1347 aa7.48□□□□□ -1.21
CPSF7-213ENST00000494016 BRWD3Q6RI45 1802 aa7.48□□□□□ -1.21
CPSF7-213ENST00000494016 CAMTA1Q9Y6Y1 1673 aa7.47□□□□□ -1.21
CPSF7-213ENST00000494016 SLIT2O94813 1529 aa7.47□□□□□ -1.21
CPSF7-213ENST00000494016 KDM3BQ7LBC6 1761 aa7.47□□□□□ -1.21
CPSF7-213ENST00000494016 CDC14CA4D256 554 aa7.47□□□□□ -1.21
CPSF7-213ENST00000494016 THBS1P07996 1170 aa7.47□□□□□ -1.21
CPSF7-213ENST00000494016 CCT4P50991 539 aaKnown RBP7.47□□□□□ -1.21
CPSF7-213ENST00000494016 C1orf53Q5VUE5 145 aa7.47□□□□□ -1.21
CPSF7-213ENST00000494016 CEP85Q6P2H3 762 aa7.47□□□□□ -1.21
CPSF7-213ENST00000494016 ZNF530Q6P9A1 599 aaPredicted RBP7.47□□□□□ -1.21
CPSF7-213ENST00000494016 MPRIPQ6WCQ1 1025 aa7.47□□□□□ -1.21
CPSF7-213ENST00000494016 PGBD3Q8N328 593 aa7.47□□□□□ -1.21
CPSF7-213ENST00000494016 C7orf43Q8WVR3 580 aa7.47□□□□□ -1.21
CPSF7-213ENST00000494016 PRIMPOLQ96LW4 560 aa7.47□□□□□ -1.21
CPSF7-213ENST00000494016 TBC1D32Q96NH3 1257 aa7.47□□□□□ -1.21
CPSF7-213ENST00000494016 NUCKS1Q9H1E3 243 aaKnown RBP7.47□□□□□ -1.21
CPSF7-213ENST00000494016 RUBCNLQ9H714 662 aa7.47□□□□□ -1.21
CPSF7-213ENST00000494016 ATP10DQ9P241 1426 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms