RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 GSPT1P15170 499 aaKnown RBP21.65■■□□□ 1.06
PDLIM7-208ENST00000493815 DCPSQ96C86 337 aaKnown RBP21.65■■□□□ 1.06
PDLIM7-208ENST00000493815 FSD1Q9BTV5 496 aa21.65■■□□□ 1.06
PDLIM7-208ENST00000493815 GLIS2Q9BZE0 524 aaPredicted RBP21.65■■□□□ 1.06
PDLIM7-208ENST00000493815 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.65■■□□□ 1.063e-7■■■□□ 15.9
PDLIM7-208ENST00000493815 USP40Q9NVE5 1235 aa21.65■■□□□ 1.06
PDLIM7-208ENST00000493815 AATFQ9NY61 560 aaKnown RBP eCLIP21.65■■□□□ 1.06
PDLIM7-208ENST00000493815 GPR75-ASB3A0A0A6YYF3 556 aa21.64■■□□□ 1.05
PDLIM7-208ENST00000493815 TCRBV5S4A2TA0A5A2 114 aa21.64■■□□□ 1.05
PDLIM7-208ENST00000493815 ADM5C9JUS6 153 aa21.64■■□□□ 1.05
PDLIM7-208ENST00000493815 ADD2P35612 726 aa21.64■■□□□ 1.05
PDLIM7-208ENST00000493815 FMR1Q06787 632 aaKnown RBP eCLIP21.64■■□□□ 1.05
PDLIM7-208ENST00000493815 SPDYE2Q495Y8 402 aa21.64■■□□□ 1.05
PDLIM7-208ENST00000493815 TTC22Q5TAA0 569 aa21.64■■□□□ 1.05
PDLIM7-208ENST00000493815 USP48Q86UV5 1035 aa21.64■■□□□ 1.05
PDLIM7-208ENST00000493815 CNTROBQ8N137 903 aa21.64■■□□□ 1.05
PDLIM7-208ENST00000493815 TCP10L2B9ZVM9 353 aa21.63■■□□□ 1.05
PDLIM7-208ENST00000493815 DYNLL1P63167 89 aaKnown RBP21.63■■□□□ 1.05
PDLIM7-208ENST00000493815 KRT26Q7Z3Y9 468 aa21.63■■□□□ 1.05
PDLIM7-208ENST00000493815 SMC1BQ8NDV3 1235 aa21.63■■□□□ 1.05
PDLIM7-208ENST00000493815 RBM46Q8TBY0 533 aaKnown RBP21.63■■□□□ 1.05
PDLIM7-208ENST00000493815 EVI5LQ96CN4 794 aa21.63■■□□□ 1.05
PDLIM7-208ENST00000493815 GTF3C3Q9Y5Q9 886 aa21.63■■□□□ 1.05
PDLIM7-208ENST00000493815 TRAF5O00463 557 aa21.63■■□□□ 1.05
PDLIM7-208ENST00000493815 PRAMEF18Q5VWM3 479 aa21.63■■□□□ 1.05
PDLIM7-208ENST00000493815 MAST2Q6P0Q8 1798 aa21.62■■□□□ 1.05
PDLIM7-208ENST00000493815 RHBDL3P58872 404 aa21.62■■□□□ 1.05
PDLIM7-208ENST00000493815 SULF1Q8IWU6 871 aa21.62■■□□□ 1.05
PDLIM7-208ENST00000493815 SH3RF3Q8TEJ3 882 aaPredicted RBP21.62■■□□□ 1.05
PDLIM7-208ENST00000493815 NFIAQ12857 509 aa21.61■■□□□ 1.05
PDLIM7-208ENST00000493815 NOL10Q9BSC4 688 aaKnown RBP21.61■■□□□ 1.05
PDLIM7-208ENST00000493815 RNF113AO15541 343 aaKnown RBP21.6■■□□□ 1.05
PDLIM7-208ENST00000493815 CDC37L1Q7L3B6 337 aa21.6■■□□□ 1.05
PDLIM7-208ENST00000493815 POLR2AP24928 1970 aaKnown RBP21.6■■□□□ 1.05
PDLIM7-208ENST00000493815 IGSF3O75054 1194 aa21.6■■□□□ 1.05
PDLIM7-208ENST00000493815 BAG3O95817 575 aa21.6■■□□□ 1.05
PDLIM7-208ENST00000493815 ITGBL1O95965 494 aaPredicted RBP21.6■■□□□ 1.05
PDLIM7-208ENST00000493815 SDSP20132 328 aa21.6■■□□□ 1.05
PDLIM7-208ENST00000493815 TCP10Q12799 353 aa21.6■■□□□ 1.05
PDLIM7-208ENST00000493815 UBE3CQ15386 1083 aa21.6■■□□□ 1.05
PDLIM7-208ENST00000493815 ZSCAN25Q6NSZ9 544 aa21.6■■□□□ 1.05
PDLIM7-208ENST00000493815 PUS7LQ9H0K6 701 aaKnown RBP21.6■■□□□ 1.05
PDLIM7-208ENST00000493815 DEFB129Q9H1M3 183 aa21.6■■□□□ 1.05
PDLIM7-208ENST00000493815 TMOD2Q9NZR1 351 aa21.6■■□□□ 1.05
PDLIM7-208ENST00000493815 PITPNM2Q9BZ72 1349 aa21.59■■□□□ 1.05
PDLIM7-208ENST00000493815 WDHD1O75717 1129 aaPredicted RBP21.59■■□□□ 1.05
PDLIM7-208ENST00000493815 APOBEC3FQ8IUX4 373 aaKnown RBP21.59■■□□□ 1.05
PDLIM7-208ENST00000493815 MAGEB6P1A0A0J9YX57 407 aa21.58■■□□□ 1.05
PDLIM7-208ENST00000493815 PPP4CP60510 307 aa21.58■■□□□ 1.05
PDLIM7-208ENST00000493815 PICALMQ13492 652 aa21.58■■□□□ 1.05
PDLIM7-208ENST00000493815 RASA3Q14644 834 aa21.58■■□□□ 1.05
PDLIM7-208ENST00000493815 CDAN1Q8IWY9 1227 aa21.58■■□□□ 1.05
PDLIM7-208ENST00000493815 TEX11Q8IYF3 940 aa21.58■■□□□ 1.05
PDLIM7-208ENST00000493815 OSBP2Q969R2 916 aa21.58■■□□□ 1.05
PDLIM7-208ENST00000493815 RIOK1Q9BRS2 568 aaKnown RBP21.58■■□□□ 1.05
PDLIM7-208ENST00000493815 DDX4Q9NQI0 724 aaKnown RBP21.58■■□□□ 1.05
PDLIM7-208ENST00000493815 ZFPM1Q8IX07 1006 aa21.57■■□□□ 1.04
PDLIM7-208ENST00000493815 LCORLQ8N3X6 602 aa21.57■■□□□ 1.04
PDLIM7-208ENST00000493815 SEC62Q99442 399 aaKnown RBP21.57■■□□□ 1.04
PDLIM7-208ENST00000493815 TMEM39BQ9GZU3 492 aa21.57■■□□□ 1.04
PDLIM7-208ENST00000493815 ARMT1Q9H993 441 aa21.57■■□□□ 1.04
PDLIM7-208ENST00000493815 FAM198AQ9UFP1 575 aa21.57■■□□□ 1.04
PDLIM7-208ENST00000493815 CNTNAP1P78357 1384 aa21.57■■□□□ 1.04
PDLIM7-208ENST00000493815 MBD4O95243 580 aa21.56■■□□□ 1.04
PDLIM7-208ENST00000493815 ZFYP08048 801 aaPredicted RBP21.56■■□□□ 1.04
PDLIM7-208ENST00000493815 FSTL1Q12841 308 aa21.56■■□□□ 1.04
PDLIM7-208ENST00000493815 ECM29Q5VYK3 1845 aa21.56■■□□□ 1.04
PDLIM7-208ENST00000493815 TMED8Q6PL24 325 aaPredicted RBP21.56■■□□□ 1.04
PDLIM7-208ENST00000493815 TGFBRAP1Q8WUH2 860 aa21.56■■□□□ 1.04
PDLIM7-208ENST00000493815 APPBP2Q92624 585 aa21.56■■□□□ 1.04
PDLIM7-208ENST00000493815 FAM227BQ96M60 508 aa21.56■■□□□ 1.04
PDLIM7-208ENST00000493815 ZNF408Q9H9D4 720 aa21.56■■□□□ 1.04
PDLIM7-208ENST00000493815 MYH7P12883 1935 aa21.55■■□□□ 1.04
PDLIM7-208ENST00000493815 M0R2C6 588 aa21.55■■□□□ 1.04
PDLIM7-208ENST00000493815 LRRFIP1Q32MZ4 808 aaKnown RBP21.55■■□□□ 1.04
PDLIM7-208ENST00000493815 CDCA5Q96FF9 252 aa21.55■■□□□ 1.04
PDLIM7-208ENST00000493815 RFX7Q2KHR2 1363 aa21.54■■□□□ 1.04
PDLIM7-208ENST00000493815 PLCG2P16885 1265 aa21.54■■□□□ 1.04
PDLIM7-208ENST00000493815 TNFAIP1Q13829 316 aa21.54■■□□□ 1.04
PDLIM7-208ENST00000493815 ZMYM1Q5SVZ6 1142 aa21.54■■□□□ 1.04
PDLIM7-208ENST00000493815 MAPKAPK5Q8IW41 473 aa21.54■■□□□ 1.04
PDLIM7-208ENST00000493815 AIDAQ96BJ3 306 aa21.54■■□□□ 1.04
PDLIM7-208ENST00000493815 IDI2Q9BXS1 227 aa21.54■■□□□ 1.04
PDLIM7-208ENST00000493815 PRKAB2O43741 272 aa21.53■■□□□ 1.04
PDLIM7-208ENST00000493815 NMIQ13287 307 aaPredicted RBP21.53■■□□□ 1.04
PDLIM7-208ENST00000493815 FKBP1CQ5VVH2 108 aa21.53■■□□□ 1.04
PDLIM7-208ENST00000493815 PASKQ96RG2 1323 aa21.53■■□□□ 1.04
PDLIM7-208ENST00000493815 A0A0D9SFI3 127 aa21.53■■□□□ 1.04
PDLIM7-208ENST00000493815 TNNI2P48788 182 aa21.53■■□□□ 1.04
PDLIM7-208ENST00000493815 NBPF12Q5TAG4 269 aaPredicted RBP21.53■■□□□ 1.04
PDLIM7-208ENST00000493815 CCDC129Q6ZRS4 1044 aa21.53■■□□□ 1.04
PDLIM7-208ENST00000493815 SDR42E1Q8WUS8 393 aa21.53■■□□□ 1.04
PDLIM7-208ENST00000493815 SLC4A8Q2Y0W8 1093 aa21.52■■□□□ 1.04
PDLIM7-208ENST00000493815 FAM83AQ86UY5 434 aa21.52■■□□□ 1.04
PDLIM7-208ENST00000493815 TEPSINQ96N21 525 aa21.52■■□□□ 1.04
PDLIM7-208ENST00000493815 FZD1Q9UP38 647 aa21.52■■□□□ 1.04
PDLIM7-208ENST00000493815 FLT1P17948 1338 aa21.51■■□□□ 1.03
PDLIM7-208ENST00000493815 GPAA1O43292 621 aa21.51■■□□□ 1.03
PDLIM7-208ENST00000493815 CELF2O95319 508 aaKnown RBP21.51■■□□□ 1.03
PDLIM7-208ENST00000493815 USP5P45974 858 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 168.9 ms