RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 ATP6V1AP38606 617 aa22.56■■□□□ 1.2
RNF40-203ENST00000493683 INF2Q27J81 1249 aa22.56■■□□□ 1.2
RNF40-203ENST00000493683 TTC6Q86TZ1 520 aa22.56■■□□□ 1.2
RNF40-203ENST00000493683 CERS3Q8IU89 383 aa22.56■■□□□ 1.2
RNF40-203ENST00000493683 SDAD1Q9NVU7 687 aaKnown RBP eCLIP22.56■■□□□ 1.2
RNF40-203ENST00000493683 SERPINA10Q9UK55 444 aa22.56■■□□□ 1.2
RNF40-203ENST00000493683 MYCNP04198 464 aaPredicted RBP22.55■■□□□ 1.2
RNF40-203ENST00000493683 ZNF445P59923 1031 aa22.55■■□□□ 1.2
RNF40-203ENST00000493683 TBC1D8BQ0IIM8 1120 aa22.55■■□□□ 1.2
RNF40-203ENST00000493683 TSKSQ9UJT2 592 aa22.55■■□□□ 1.2
RNF40-203ENST00000493683 URB2Q14146 1524 aaKnown RBP22.55■■□□□ 1.2
RNF40-203ENST00000493683 GABPB1Q06547 395 aaPredicted RBP22.55■■□□□ 1.2
RNF40-203ENST00000493683 C8orf74Q6P047 294 aa22.55■■□□□ 1.2
RNF40-203ENST00000493683 GBP6Q6ZN66 633 aa22.55■■□□□ 1.2
RNF40-203ENST00000493683 HOXB7P09629 217 aa22.55■■□□□ 1.2
RNF40-203ENST00000493683 MRPS9P82933 396 aaKnown RBP22.55■■□□□ 1.2
RNF40-203ENST00000493683 IFT20Q8IY31 132 aa22.55■■□□□ 1.2
RNF40-203ENST00000493683 ARL1P40616 181 aaPredicted RBP22.55■■□□□ 1.2
RNF40-203ENST00000493683 TPTE2Q6XPS3 522 aa22.55■■□□□ 1.2
RNF40-203ENST00000493683 STMN2Q93045 179 aa22.55■■□□□ 1.2
RNF40-203ENST00000493683 DENND2AQ9ULE3 1009 aa22.55■■□□□ 1.2
RNF40-203ENST00000493683 TMTC1Q8IUR5 882 aa22.54■■□□□ 1.2
RNF40-203ENST00000493683 SH2D4AQ9H788 454 aa22.54■■□□□ 1.2
RNF40-203ENST00000493683 PLCH2O75038 1416 aa22.54■■□□□ 1.2
RNF40-203ENST00000493683 NPATQ14207 1427 aa22.54■■□□□ 1.2
RNF40-203ENST00000493683 FYB2Q5VWT5 728 aa22.54■■□□□ 1.2
RNF40-203ENST00000493683 ZNF354CQ86Y25 554 aa22.54■■□□□ 1.2
RNF40-203ENST00000493683 DCAF5Q96JK2 942 aa22.54■■□□□ 1.2
RNF40-203ENST00000493683 ITSN2Q9NZM3 1697 aa22.54■■□□□ 1.2
RNF40-203ENST00000493683 HAUS3Q68CZ6 603 aa22.54■■□□□ 1.2
RNF40-203ENST00000493683 RUFY4Q6ZNE9 571 aa22.54■■□□□ 1.2
RNF40-203ENST00000493683 MKRN1Q9UHC7 482 aaKnown RBP22.54■■□□□ 1.2
RNF40-203ENST00000493683 KCNH3Q9ULD8 1083 aa22.54■■□□□ 1.2
RNF40-203ENST00000493683 SBNO2Q9Y2G9 1366 aa22.54■■□□□ 1.2
RNF40-203ENST00000493683 IRS4O14654 1257 aaPredicted RBP22.53■■□□□ 1.2
RNF40-203ENST00000493683 PICALMQ13492 652 aa22.53■■□□□ 1.2
RNF40-203ENST00000493683 DZIP3Q86Y13 1208 aaKnown RBP22.53■■□□□ 1.2
RNF40-203ENST00000493683 PSMD1Q99460 953 aa22.53■■□□□ 1.2
RNF40-203ENST00000493683 UHRF1BP1LA0JNW5 1464 aa22.53■■□□□ 1.2
RNF40-203ENST00000493683 TRAF5O00463 557 aa22.53■■□□□ 1.2
RNF40-203ENST00000493683 ATP11AP98196 1134 aa22.53■■□□□ 1.2
RNF40-203ENST00000493683 CHRNA2Q15822 529 aa22.53■■□□□ 1.2
RNF40-203ENST00000493683 ZRANB1Q9UGI0 708 aa22.53■■□□□ 1.2
RNF40-203ENST00000493683 A0A1B0GUA9 196 aa22.53■■□□□ 1.2
RNF40-203ENST00000493683 A0A1B0GVL5 298 aa22.53■■□□□ 1.2
RNF40-203ENST00000493683 LDHBP07195 334 aaKnown RBP22.53■■□□□ 1.2
RNF40-203ENST00000493683 ERCC5P28715 1186 aaPredicted RBP22.53■■□□□ 1.2
RNF40-203ENST00000493683 PSMC4P43686 418 aa22.53■■□□□ 1.2
RNF40-203ENST00000493683 ERCC6LQ2NKX8 1250 aa22.53■■□□□ 1.2
RNF40-203ENST00000493683 WDR44Q5JSH3 913 aa22.53■■□□□ 1.2
RNF40-203ENST00000493683 CCDC25Q86WR0 208 aa22.53■■□□□ 1.2
RNF40-203ENST00000493683 MAK16Q9BXY0 300 aaKnown RBP22.53■■□□□ 1.2
RNF40-203ENST00000493683 RLBP1P12271 317 aa22.53■■□□□ 1.2
RNF40-203ENST00000493683 RAPGEF1Q13905 1077 aa22.53■■□□□ 1.2
RNF40-203ENST00000493683 NOX5Q96PH1 765 aa22.53■■□□□ 1.2
RNF40-203ENST00000493683 CTNND2Q9UQB3 1225 aa22.53■■□□□ 1.2
RNF40-203ENST00000493683 VWA3AA6NCI4 1184 aa22.52■■□□□ 1.2
RNF40-203ENST00000493683 ARHGAP6O43182 974 aa22.52■■□□□ 1.2
RNF40-203ENST00000493683 CALUO43852 315 aaPredicted RBP22.52■■□□□ 1.2
RNF40-203ENST00000493683 GAS8O95995 478 aa22.52■■□□□ 1.2
RNF40-203ENST00000493683 UBL4BQ8N7F7 174 aa22.52■■□□□ 1.2
RNF40-203ENST00000493683 UTP11Q9Y3A2 253 aaKnown RBP22.52■■□□□ 1.2
RNF40-203ENST00000493683 SLC39A6Q13433 755 aa22.52■■□□□ 1.2
RNF40-203ENST00000493683 FAM184BQ9ULE4 1060 aa22.52■■□□□ 1.2
RNF40-203ENST00000493683 IQSEC3Q9UPP2 1182 aaPredicted RBP22.52■■□□□ 1.2
RNF40-203ENST00000493683 ZBTB7BO15156 539 aaPredicted RBP22.52■■□□□ 1.19
RNF40-203ENST00000493683 TNFAIP3P21580 790 aa22.52■■□□□ 1.19
RNF40-203ENST00000493683 ZNF75DP51815 510 aa22.52■■□□□ 1.19
RNF40-203ENST00000493683 CACNA2D3Q8IZS8 1091 aa22.52■■□□□ 1.19
RNF40-203ENST00000493683 EYA3Q99504 573 aa22.52■■□□□ 1.19
RNF40-203ENST00000493683 SNX16P57768 344 aa22.51■■□□□ 1.19
RNF40-203ENST00000493683 FANCCQ00597 558 aa22.51■■□□□ 1.19
RNF40-203ENST00000493683 DDX21Q9NR30 783 aaKnown RBP eCLIP22.51■■□□□ 1.19
RNF40-203ENST00000493683 SYNRGQ9UMZ2 1314 aa22.51■■□□□ 1.19
RNF40-203ENST00000493683 GMNNO75496 209 aa22.51■■□□□ 1.19
RNF40-203ENST00000493683 PDE4DQ08499 809 aa22.51■■□□□ 1.19
RNF40-203ENST00000493683 SMIM23A6NLE4 172 aa22.5■■□□□ 1.19
RNF40-203ENST00000493683 NLRP12P59046 1061 aa22.5■■□□□ 1.19
RNF40-203ENST00000493683 DCAF17Q5H9S7 520 aaPredicted RBP22.5■■□□□ 1.19
RNF40-203ENST00000493683 CHST3Q7LGC8 479 aa22.5■■□□□ 1.19
RNF40-203ENST00000493683 LEO1Q8WVC0 666 aaPredicted RBP22.5■■□□□ 1.19
RNF40-203ENST00000493683 RBSNQ9H1K0 784 aa22.5■■□□□ 1.19
RNF40-203ENST00000493683 SEPT6Q14141 434 aa22.5■■□□□ 1.19
RNF40-203ENST00000493683 SLC27A2O14975 620 aa22.5■■□□□ 1.19
RNF40-203ENST00000493683 ARHGAP25P42331 645 aa22.5■■□□□ 1.19
RNF40-203ENST00000493683 LIN9Q5TKA1 542 aa22.5■■□□□ 1.19
RNF40-203ENST00000493683 GABPB2Q8TAK5 448 aaPredicted RBP22.5■■□□□ 1.19
RNF40-203ENST00000493683 SECISBP2LQ93073 1101 aaKnown RBP22.5■■□□□ 1.19
RNF40-203ENST00000493683 ARHGEF12Q9NZN5 1544 aa22.5■■□□□ 1.19
RNF40-203ENST00000493683 TPD52P55327 224 aaPredicted RBP22.5■■□□□ 1.19
RNF40-203ENST00000493683 ZC3H12CQ9C0D7 883 aaKnown RBP22.5■■□□□ 1.19
RNF40-203ENST00000493683 EXOC7Q9UPT5 735 aa22.5■■□□□ 1.19
RNF40-203ENST00000493683 SPOPO43791 374 aa22.49■■□□□ 1.19
RNF40-203ENST00000493683 STX10O60499 249 aa22.49■■□□□ 1.19
RNF40-203ENST00000493683 IL2RBP14784 551 aa22.49■■□□□ 1.19
RNF40-203ENST00000493683 PAK1Q13153 545 aa22.49■■□□□ 1.19
RNF40-203ENST00000493683 ASIC2Q16515 512 aa22.49■■□□□ 1.19
RNF40-203ENST00000493683 TAOK1Q7L7X3 1001 aa22.49■■□□□ 1.19
RNF40-203ENST00000493683 FCHSD1Q86WN1 690 aa22.49■■□□□ 1.19
RNF40-203ENST00000493683 NUCKS1Q9H1E3 243 aaKnown RBP22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms