RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 TAF6LQ9Y6J9 622 aa15.12■□□□□ 0.01
VPS52-220ENST00000493674 GPR75-ASB3A0A0A6YYF3 556 aa15.11■□□□□ 0.01
VPS52-220ENST00000493674 PATL2C9JE40 543 aaKnown RBP15.11■□□□□ 0.01
VPS52-220ENST00000493674 DYNLL1P63167 89 aaKnown RBP15.11■□□□□ 0.01
VPS52-220ENST00000493674 HDLBPQ00341 1268 aaKnown RBP15.11■□□□□ 0.01
VPS52-220ENST00000493674 GIMAP6Q6P9H5 292 aa15.11■□□□□ 0.01
VPS52-220ENST00000493674 CERS3Q8IU89 383 aa15.11■□□□□ 0.01
VPS52-220ENST00000493674 SLF2Q8IX21 1173 aa15.11■□□□□ 0.01
VPS52-220ENST00000493674 DDRGK1Q96HY6 314 aa15.11■□□□□ 0.01
VPS52-220ENST00000493674 MXD3Q9BW11 206 aa15.11■□□□□ 0.01
VPS52-220ENST00000493674 MRIQ9BWK5 157 aa15.11■□□□□ 0.01
VPS52-220ENST00000493674 CTNNA3Q9UI47 895 aa15.11■□□□□ 0.01
VPS52-220ENST00000493674 ZNRF3Q9ULT6 936 aa15.11■□□□□ 0.01
VPS52-220ENST00000493674 GREB1LQ9C091 1923 aaPredicted RBP15.11■□□□□ 0.01
VPS52-220ENST00000493674 PRKAB2O43741 272 aa15.1■□□□□ 0.01
VPS52-220ENST00000493674 VIL1P09327 827 aaKnown RBP15.1■□□□□ 0.01
VPS52-220ENST00000493674 YY1P25490 414 aa15.1■□□□□ 0.01
VPS52-220ENST00000493674 HHIPL2Q6UWX4 724 aa15.1■□□□□ 0.01
VPS52-220ENST00000493674 NIM1KQ8IY84 436 aa15.1■□□□□ 0.01
VPS52-220ENST00000493674 IFNL3Q8IZI9 196 aa15.1■□□□□ 0.01
VPS52-220ENST00000493674 GMLQ99445 158 aa15.1■□□□□ 0.01
VPS52-220ENST00000493674 NBPF3Q9H094 633 aa15.1■□□□□ 0.01
VPS52-220ENST00000493674 DAGLAQ9Y4D2 1042 aa15.1■□□□□ 0.01
VPS52-220ENST00000493674 MYO3BQ8WXR4 1341 aa15.1■□□□□ 0.01
VPS52-220ENST00000493674 ZKSCAN1P17029 563 aaPredicted RBP15.09■□□□□ 0.01
VPS52-220ENST00000493674 RHBDL3P58872 404 aa15.09■□□□□ 0.01
VPS52-220ENST00000493674 ADCK5Q3MIX3 580 aa15.09■□□□□ 0.01
VPS52-220ENST00000493674 STOX1Q6ZVD7 989 aa15.09■□□□□ 0.01
VPS52-220ENST00000493674 IPO9Q96P70 1041 aaKnown RBP15.09■□□□□ 0.01
VPS52-220ENST00000493674 ZSWIM6Q9HCJ5 1215 aa15.09■□□□□ 0.01
VPS52-220ENST00000493674 AATFQ9NY61 560 aaKnown RBP eCLIP15.09■□□□□ 0.01
VPS52-220ENST00000493674 MKRN1Q9UHC7 482 aaKnown RBP15.09■□□□□ 0.01
VPS52-220ENST00000493674 TTF2Q9UNY4 1162 aaKnown RBP15.09■□□□□ 0.01
VPS52-220ENST00000493674 SLC4A4Q9Y6R1 1079 aa15.09■□□□□ 0.01
VPS52-220ENST00000493674 ZC3H4Q9UPT8 1303 aaKnown RBP15.09■□□□□ 0.01
VPS52-220ENST00000493674 POLR2AP24928 1970 aaKnown RBP15.08■□□□□ 0
VPS52-220ENST00000493674 CD2BP2O95400 341 aaKnown RBP15.08■□□□□ 0
VPS52-220ENST00000493674 RASSF7Q02833 373 aa15.08■□□□□ 0
VPS52-220ENST00000493674 KRT32Q14532 448 aa15.08■□□□□ 0
VPS52-220ENST00000493674 RSBN1LQ6PCB5 846 aaPredicted RBP15.08■□□□□ 0
VPS52-220ENST00000493674 FBXW7Q969H0 707 aa15.08■□□□□ 0
VPS52-220ENST00000493674 TTC14Q96N46 770 aa15.08■□□□□ 0
VPS52-220ENST00000493674 CRNKL1Q9BZJ0 848 aaKnown RBP15.08■□□□□ 0
VPS52-220ENST00000493674 PSMD14O00487 310 aa15.07■□□□□ 0
VPS52-220ENST00000493674 BAG3O95817 575 aa15.07■□□□□ 0
VPS52-220ENST00000493674 PLCG2P16885 1265 aa15.07■□□□□ 0
VPS52-220ENST00000493674 BTDP43251 543 aa15.07■□□□□ 0
VPS52-220ENST00000493674 IMMTQ16891 758 aaKnown RBP15.07■□□□□ 0
VPS52-220ENST00000493674 ARHGAP27Q6ZUM4 889 aa15.07■□□□□ 0
VPS52-220ENST00000493674 SH3RF3Q8TEJ3 882 aaPredicted RBP15.07■□□□□ 0
VPS52-220ENST00000493674 SDR42E1Q8WUS8 393 aa15.07■□□□□ 0
VPS52-220ENST00000493674 ZDHHC15Q96MV8 337 aa15.07■□□□□ 0
VPS52-220ENST00000493674 TBC1D2Q9BYX2 928 aa15.07■□□□□ 0
VPS52-220ENST00000493674 NACAP1Q9BZK3 213 aa15.07■□□□□ 0
VPS52-220ENST00000493674 ATP8A2Q9NTI2 1148 aa15.07■□□□□ 0
VPS52-220ENST00000493674 ANAPC4Q9UJX5 808 aa15.07■□□□□ 0
VPS52-220ENST00000493674 MYH6P13533 1939 aa15.07■□□□□ 0
VPS52-220ENST00000493674 FZD9O00144 591 aa15.06■□□□□ 0
VPS52-220ENST00000493674 CXCL9Q07325 125 aa15.06■□□□□ 0
VPS52-220ENST00000493674 COL9A3Q14050 684 aaPredicted RBP15.06■□□□□ 0
VPS52-220ENST00000493674 AGBL3Q8NEM8 1001 aa15.06■□□□□ 0
VPS52-220ENST00000493674 TEKT1Q969V4 418 aa15.06■□□□□ 0
VPS52-220ENST00000493674 JAKMIP1Q96N16 626 aaKnown RBP15.06■□□□□ 0
VPS52-220ENST00000493674 NAPBQ9H115 298 aa15.06■□□□□ 0
VPS52-220ENST00000493674 ALDH8A1Q9H2A2 487 aaPredicted RBP15.06■□□□□ 0
VPS52-220ENST00000493674 DCP1AQ9NPI6 582 aaPredicted RBP15.06■□□□□ 0
VPS52-220ENST00000493674 SERPINA10Q9UK55 444 aa15.06■□□□□ 0
VPS52-220ENST00000493674 ROBO3Q96MS0 1386 aa15.06■□□□□ 0
VPS52-220ENST00000493674 ATAD5Q96QE3 1844 aa15.06■□□□□ 0
VPS52-220ENST00000493674 MYH4Q9Y623 1939 aa15.05■□□□□ 0
VPS52-220ENST00000493674 E7EWF7 191 aa15.05■□□□□ -0
VPS52-220ENST00000493674 RAD17O75943 681 aa15.05■□□□□ -0
VPS52-220ENST00000493674 CASTP20810 708 aaKnown RBP15.05■□□□□ -0
VPS52-220ENST00000493674 PSMA5P28066 241 aa15.05■□□□□ -0
VPS52-220ENST00000493674 CRKP46108 304 aa15.05■□□□□ -0
VPS52-220ENST00000493674 SBK1Q52WX2 424 aa15.05■□□□□ -0
VPS52-220ENST00000493674 APOBEC3HQ6NTF7 200 aaKnown RBP15.05■□□□□ -0
VPS52-220ENST00000493674 RUFY3Q7L099 469 aa15.05■□□□□ -0
VPS52-220ENST00000493674 TBC1D10CQ8IV04 446 aa15.05■□□□□ -0
VPS52-220ENST00000493674 KIAA0825Q8IV33 1275 aa15.05■□□□□ -0
VPS52-220ENST00000493674 JDP2Q8WYK2 163 aa15.05■□□□□ -0
VPS52-220ENST00000493674 NOL10Q9BSC4 688 aaKnown RBP15.05■□□□□ -0
VPS52-220ENST00000493674 UPF3BQ9BZI7 483 aaKnown RBP15.05■□□□□ -0
VPS52-220ENST00000493674 COL2A1P02458 1487 aaPredicted RBP15.05■□□□□ -0
VPS52-220ENST00000493674 SCN4AP35499 1836 aa15.04■□□□□ -0
VPS52-220ENST00000493674 F8W031 263 aaPredicted RBP15.04■□□□□ -0
VPS52-220ENST00000493674 ZNF213O14771 459 aa15.04■□□□□ -0
VPS52-220ENST00000493674 ST18O60284 1047 aa15.04■□□□□ -0
VPS52-220ENST00000493674 APPP05067 770 aa15.04■□□□□ -0
VPS52-220ENST00000493674 LMNB1P20700 586 aa15.04■□□□□ -0
VPS52-220ENST00000493674 RPS6KB1P23443 525 aa15.04■□□□□ -0
VPS52-220ENST00000493674 SCNN1DP51172 638 aa15.04■□□□□ -0
VPS52-220ENST00000493674 NEK4P51957 841 aa15.04■□□□□ -0
VPS52-220ENST00000493674 HAND2P61296 217 aa15.04■□□□□ -0
VPS52-220ENST00000493674 BECN1Q14457 450 aa15.04■□□□□ -0
VPS52-220ENST00000493674 CIAPIN1Q6FI81 312 aa15.04■□□□□ -0
VPS52-220ENST00000493674 NEK1Q96PY6 1258 aa15.04■□□□□ -0
VPS52-220ENST00000493674 TACC3Q9Y6A5 838 aa15.04■□□□□ -0
VPS52-220ENST00000493674 WDR19Q8NEZ3 1342 aa15.03■□□□□ -0
VPS52-220ENST00000493674 FGRP09769 529 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms