RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 NSUN4Q96CB9 384 aaKnown RBP16.53■□□□□ 0.24
PTPN7-216ENST00000492977 PODXL2Q9NZ53 605 aa16.53■□□□□ 0.24
PTPN7-216ENST00000492977 SALL1Q9NSC2 1324 aa16.53■□□□□ 0.24
PTPN7-216ENST00000492977 NRXN2Q9P2S2 1712 aa16.53■□□□□ 0.24
PTPN7-216ENST00000492977 VPS37CA5D8V6 355 aaPredicted RBP16.52■□□□□ 0.24
PTPN7-216ENST00000492977 MBD3O95983 291 aa16.52■□□□□ 0.24
PTPN7-216ENST00000492977 GPSM2P81274 684 aa16.52■□□□□ 0.24
PTPN7-216ENST00000492977 AKNAD1Q5T1N1 836 aa16.52■□□□□ 0.24
PTPN7-216ENST00000492977 GIMAP6Q6P9H5 292 aa16.52■□□□□ 0.24
PTPN7-216ENST00000492977 TMEM87AQ8NBN3 555 aa16.52■□□□□ 0.24
PTPN7-216ENST00000492977 NSUN7Q8NE18 718 aaKnown RBP16.52■□□□□ 0.24
PTPN7-216ENST00000492977 STAG1Q8WVM7 1258 aa16.52■□□□□ 0.24
PTPN7-216ENST00000492977 CHAMP1Q96JM3 812 aa16.52■□□□□ 0.24
PTPN7-216ENST00000492977 TMEM87BQ96K49 555 aa16.52■□□□□ 0.24
PTPN7-216ENST00000492977 KRT23Q9C075 422 aa16.52■□□□□ 0.24
PTPN7-216ENST00000492977 ISY1Q9ULR0 285 aaKnown RBP16.52■□□□□ 0.24
PTPN7-216ENST00000492977 TIAM2Q8IVF5 1701 aa16.52■□□□□ 0.24
PTPN7-216ENST00000492977 TNS1Q9HBL0 1735 aaKnown RBP16.52■□□□□ 0.24
PTPN7-216ENST00000492977 DHX16O60231 1041 aaKnown RBP16.51■□□□□ 0.23
PTPN7-216ENST00000492977 JAK2O60674 1132 aa16.51■□□□□ 0.23
PTPN7-216ENST00000492977 MECOMQ03112 1051 aa16.51■□□□□ 0.23
PTPN7-216ENST00000492977 CHAF1AQ13111 956 aaPredicted RBP16.51■□□□□ 0.23
PTPN7-216ENST00000492977 CHD4Q14839 1912 aa16.51■□□□□ 0.23
PTPN7-216ENST00000492977 ZNF384Q8TF68 577 aa16.51■□□□□ 0.23
PTPN7-216ENST00000492977 GGA1Q9UJY5 639 aa16.51■□□□□ 0.23
PTPN7-216ENST00000492977 ANGEL1Q9UNK9 670 aaKnown RBP16.51■□□□□ 0.23
PTPN7-216ENST00000492977 NSFL1CQ9UNZ2 370 aaKnown RBP16.51■□□□□ 0.23
PTPN7-216ENST00000492977 TCHHQ07283 1943 aa16.51■□□□□ 0.23
PTPN7-216ENST00000492977 CCDC88AQ3V6T2 1871 aa16.51■□□□□ 0.23
PTPN7-216ENST00000492977 CCT2P78371 535 aaKnown RBP16.51■□□□□ 0.23
PTPN7-216ENST00000492977 CSPP1Q1MSJ5 1256 aa16.51■□□□□ 0.23
PTPN7-216ENST00000492977 MFSD6Q6ZSS7 791 aa16.51■□□□□ 0.23
PTPN7-216ENST00000492977 FAM184AQ8NB25 1140 aa16.51■□□□□ 0.23
PTPN7-216ENST00000492977 MTA3Q9BTC8 594 aa16.51■□□□□ 0.23
PTPN7-216ENST00000492977 RNF41Q9H4P4 317 aaPredicted RBP16.51■□□□□ 0.23
PTPN7-216ENST00000492977 RGS17Q9UGC6 210 aaPredicted RBP16.51■□□□□ 0.23
PTPN7-216ENST00000492977 ANAPC4Q9UJX5 808 aa16.51■□□□□ 0.23
PTPN7-216ENST00000492977 NAP1L2Q9ULW6 460 aaPredicted RBP16.51■□□□□ 0.23
PTPN7-216ENST00000492977 EP400Q96L91 3159 aa16.5■□□□□ 0.23
PTPN7-216ENST00000492977 NEDD4P46934 1319 aa16.5■□□□□ 0.23
PTPN7-216ENST00000492977 KLF18A0A0U1RQI7 1052 aa16.5■□□□□ 0.23
PTPN7-216ENST00000492977 FSD2A1L4K1 749 aa16.5■□□□□ 0.23
PTPN7-216ENST00000492977 B4E1Z4 1266 aa16.5■□□□□ 0.23
PTPN7-216ENST00000492977 DTNBO60941 627 aa16.5■□□□□ 0.23
PTPN7-216ENST00000492977 UFL1O94874 794 aa16.5■□□□□ 0.23
PTPN7-216ENST00000492977 CTDNEP1O95476 244 aa16.5■□□□□ 0.23
PTPN7-216ENST00000492977 NCLP19338 710 aaKnown RBP16.5■□□□□ 0.23
PTPN7-216ENST00000492977 CTDSPL2Q05D32 466 aa16.5■□□□□ 0.23
PTPN7-216ENST00000492977 L1TD1Q5T7N2 865 aaKnown RBP16.5■□□□□ 0.23
PTPN7-216ENST00000492977 CYB5R4Q7L1T6 521 aa16.5■□□□□ 0.23
PTPN7-216ENST00000492977 USP48Q86UV5 1035 aa16.5■□□□□ 0.23
PTPN7-216ENST00000492977 SP8Q8IXZ3 490 aa16.5■□□□□ 0.23
PTPN7-216ENST00000492977 GPHNQ9NQX3 736 aaPredicted RBP16.5■□□□□ 0.23
PTPN7-216ENST00000492977 BRPF3Q9ULD4 1205 aa16.5■□□□□ 0.23
PTPN7-216ENST00000492977 PARP3Q9Y6F1 533 aa16.5■□□□□ 0.23
PTPN7-216ENST00000492977 MAST2Q6P0Q8 1798 aa16.5■□□□□ 0.23
PTPN7-216ENST00000492977 ANKRD31Q8N7Z5 1873 aa16.49■□□□□ 0.23
PTPN7-216ENST00000492977 PTPDC1A2A3K4 754 aa16.49■□□□□ 0.23
PTPN7-216ENST00000492977 SH2B2O14492 632 aaPredicted RBP16.49■□□□□ 0.23
PTPN7-216ENST00000492977 NPR1P16066 1061 aa16.49■□□□□ 0.23
PTPN7-216ENST00000492977 CDC37L1Q7L3B6 337 aa16.49■□□□□ 0.23
PTPN7-216ENST00000492977 GPT2Q8TD30 523 aa16.49■□□□□ 0.23
PTPN7-216ENST00000492977 IGDCC4Q8TDY8 1250 aa16.49■□□□□ 0.23
PTPN7-216ENST00000492977 GOLGA6L3A6NEY3 463 aa16.48■□□□□ 0.23
PTPN7-216ENST00000492977 LDHBP07195 334 aaKnown RBP16.48■□□□□ 0.23
PTPN7-216ENST00000492977 SRGNP10124 158 aa16.48■□□□□ 0.23
PTPN7-216ENST00000492977 PRDX5P30044 214 aa16.48■□□□□ 0.23
PTPN7-216ENST00000492977 PDE6BP35913 854 aa16.48■□□□□ 0.23
PTPN7-216ENST00000492977 LIFRP42702 1097 aa16.48■□□□□ 0.23
PTPN7-216ENST00000492977 DYNLL1P63167 89 aaKnown RBP16.48■□□□□ 0.23
PTPN7-216ENST00000492977 PPARAQ07869 468 aa16.48■□□□□ 0.23
PTPN7-216ENST00000492977 FOXD4L6Q3SYB3 417 aaPredicted RBP16.48■□□□□ 0.23
PTPN7-216ENST00000492977 POTEAQ6S8J7 498 aa16.48■□□□□ 0.23
PTPN7-216ENST00000492977 FOXD4L3Q6VB84 417 aaPredicted RBP16.48■□□□□ 0.23
PTPN7-216ENST00000492977 SDR42E1Q8WUS8 393 aa16.48■□□□□ 0.23
PTPN7-216ENST00000492977 DDX11Q96FC9 970 aa16.48■□□□□ 0.23
PTPN7-216ENST00000492977 NCOA5Q9HCD5 579 aaKnown RBP16.48■□□□□ 0.23
PTPN7-216ENST00000492977 HPS5Q9UPZ3 1129 aa16.48■□□□□ 0.23
PTPN7-216ENST00000492977 CNPY2Q9Y2B0 182 aa16.48■□□□□ 0.23
PTPN7-216ENST00000492977 GOLGA8BA8MQT2 603 aa16.47■□□□□ 0.23
PTPN7-216ENST00000492977 PPEF1O14829 653 aaPredicted RBP16.47■□□□□ 0.23
PTPN7-216ENST00000492977 MMP10P09238 476 aa16.47■□□□□ 0.23
PTPN7-216ENST00000492977 PCP11498 1178 aaKnown RBP16.47■□□□□ 0.23
PTPN7-216ENST00000492977 IL1R1P14778 569 aa16.47■□□□□ 0.23
PTPN7-216ENST00000492977 ALDH1B1P30837 517 aa16.47■□□□□ 0.23
PTPN7-216ENST00000492977 GSTO1P78417 241 aa16.47■□□□□ 0.23
PTPN7-216ENST00000492977 SGMS1Q86VZ5 419 aa16.47■□□□□ 0.23
PTPN7-216ENST00000492977 DZIP1Q86YF9 867 aaKnown RBP16.47■□□□□ 0.23
PTPN7-216ENST00000492977 TBC1D16Q8TBP0 767 aa16.47■□□□□ 0.23
PTPN7-216ENST00000492977 CRNKL1Q9BZJ0 848 aaKnown RBP16.47■□□□□ 0.23
PTPN7-216ENST00000492977 ZSCAN16Q9H4T2 348 aaPredicted RBP16.47■□□□□ 0.23
PTPN7-216ENST00000492977 CD209Q9NNX6 404 aa16.47■□□□□ 0.23
PTPN7-216ENST00000492977 ZSWIM5Q9P217 1185 aa16.47■□□□□ 0.23
PTPN7-216ENST00000492977 ATP6V0A2Q9Y487 856 aa16.47■□□□□ 0.23
PTPN7-216ENST00000492977 LRRC37AA6NMS7 1700 aa16.47■□□□□ 0.23
PTPN7-216ENST00000492977 KIAA1551Q9HCM1 1747 aa16.47■□□□□ 0.23
PTPN7-216ENST00000492977 H3BQV1 296 aa16.47■□□□□ 0.23
PTPN7-216ENST00000492977 KDM4AO75164 1064 aa16.47■□□□□ 0.23
PTPN7-216ENST00000492977 IFFO2Q5TF58 517 aa16.47■□□□□ 0.23
PTPN7-216ENST00000492977 CAVIN1Q6NZI2 390 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms