RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 CCDC73Q6ZRK6 1079 aa14.99□□□□□ -0.01
PRAME-213ENST00000492657 KLHL34Q8N239 644 aa14.99□□□□□ -0.01
PRAME-213ENST00000492657 IGDCC4Q8TDY8 1250 aa14.99□□□□□ -0.01
PRAME-213ENST00000492657 FBXW7Q969H0 707 aa14.99□□□□□ -0.01
PRAME-213ENST00000492657 A0A1B0GVL5 298 aa14.98□□□□□ -0.01
PRAME-213ENST00000492657 METAP2P50579 478 aaKnown RBP eCLIP14.98□□□□□ -0.01
PRAME-213ENST00000492657 NOLC1Q14978 699 aaKnown RBP eCLIP14.98□□□□□ -0.01
PRAME-213ENST00000492657 APOA5Q6Q788 366 aa14.98□□□□□ -0.01
PRAME-213ENST00000492657 C11orf57Q6ZUT1 292 aaPredicted RBP14.98□□□□□ -0.01
PRAME-213ENST00000492657 NAPBQ9H115 298 aa14.98□□□□□ -0.01
PRAME-213ENST00000492657 KCNF1Q9H3M0 494 aa14.98□□□□□ -0.01
PRAME-213ENST00000492657 ZSWIM5Q9P217 1185 aa14.98□□□□□ -0.01
PRAME-213ENST00000492657 ERFEQ4G0M1 354 aa14.98□□□□□ -0.01
PRAME-213ENST00000492657 LINC00301Q8NCQ3 95 aa14.98□□□□□ -0.01
PRAME-213ENST00000492657 RTEL1Q9NZ71 1219 aa14.98□□□□□ -0.01
PRAME-213ENST00000492657 LRP5O75197 1615 aa14.98□□□□□ -0.01
PRAME-213ENST00000492657 SMIM22K7EJ46 135 aa14.98□□□□□ -0.01
PRAME-213ENST00000492657 FAM98CQ17RN3 349 aaKnown RBP14.98□□□□□ -0.01
PRAME-213ENST00000492657 RRP12Q5JTH9 1297 aaKnown RBP14.98□□□□□ -0.01
PRAME-213ENST00000492657 NFXL1Q6ZNB6 911 aa14.98□□□□□ -0.01
PRAME-213ENST00000492657 LINC00116Q8NCU8 138 aa14.98□□□□□ -0.01
PRAME-213ENST00000492657 PIBF1Q8WXW3 757 aa14.98□□□□□ -0.01
PRAME-213ENST00000492657 CHMP4CQ96CF2 233 aa14.98□□□□□ -0.01
PRAME-213ENST00000492657 ZKSCAN3Q9BRR0 538 aa14.98□□□□□ -0.01
PRAME-213ENST00000492657 WDR19Q8NEZ3 1342 aa14.97□□□□□ -0.01
PRAME-213ENST00000492657 DDX60Q8IY21 1712 aaKnown RBP14.97□□□□□ -0.01
PRAME-213ENST00000492657 ZSCAN20P17040 1043 aaPredicted RBP14.97□□□□□ -0.01
PRAME-213ENST00000492657 GYG1P46976 350 aa14.97□□□□□ -0.01
PRAME-213ENST00000492657 STK38Q15208 465 aa14.97□□□□□ -0.01
PRAME-213ENST00000492657 TMEM67Q5HYA8 995 aa14.97□□□□□ -0.01
PRAME-213ENST00000492657 MYSM1Q5VVJ2 828 aa14.97□□□□□ -0.01
PRAME-213ENST00000492657 MAP7D2Q96T17 732 aa14.97□□□□□ -0.01
PRAME-213ENST00000492657 ALG1Q9BT22 464 aa14.97□□□□□ -0.01
PRAME-213ENST00000492657 LY9Q9HBG7 655 aa14.97□□□□□ -0.01
PRAME-213ENST00000492657 KIF23Q02241 960 aaPredicted RBP14.97□□□□□ -0.01
PRAME-213ENST00000492657 FAM160A1Q05DH4 1040 aa14.97□□□□□ -0.01
PRAME-213ENST00000492657 SF3A1Q15459 793 aaKnown RBP14.97□□□□□ -0.01
PRAME-213ENST00000492657 ALX1Q15699 326 aa14.97□□□□□ -0.01
PRAME-213ENST00000492657 PPP4R3BQ5MIZ7 849 aa14.97□□□□□ -0.01
PRAME-213ENST00000492657 ATL3Q6DD88 541 aa14.97□□□□□ -0.01
PRAME-213ENST00000492657 ADGRA1Q86SQ6 560 aa14.97□□□□□ -0.01
PRAME-213ENST00000492657 FAM217BQ9NTX9 383 aaPredicted RBP14.97□□□□□ -0.01
PRAME-213ENST00000492657 LRP2BPQ9P2M1 347 aa14.97□□□□□ -0.01
PRAME-213ENST00000492657 PYCARDQ9ULZ3 195 aa14.97□□□□□ -0.01
PRAME-213ENST00000492657 SLC4A4Q9Y6R1 1079 aa14.97□□□□□ -0.01
PRAME-213ENST00000492657 ZMYM6O95789 1325 aa14.97□□□□□ -0.01
PRAME-213ENST00000492657 KINO60870 393 aaKnown RBP14.96□□□□□ -0.01
PRAME-213ENST00000492657 NDUFA8P51970 172 aa14.96□□□□□ -0.01
PRAME-213ENST00000492657 TOMM22Q9NS69 142 aa14.96□□□□□ -0.01
PRAME-213ENST00000492657 NRBP1Q9UHY1 535 aa14.96□□□□□ -0.01
PRAME-213ENST00000492657 PTGS1P23219 599 aa14.96□□□□□ -0.02
PRAME-213ENST00000492657 SMAP1Q8IYB5 467 aaPredicted RBP14.96□□□□□ -0.02
PRAME-213ENST00000492657 CCDC24Q8N4L8 307 aa14.96□□□□□ -0.02
PRAME-213ENST00000492657 TDRD7Q8NHU6 1098 aaKnown RBP14.96□□□□□ -0.02
PRAME-213ENST00000492657 CCDC94Q9BW85 323 aaPredicted RBP14.96□□□□□ -0.02
PRAME-213ENST00000492657 TRIM5Q9C035 493 aa14.96□□□□□ -0.02
PRAME-213ENST00000492657 ABCF2Q9UG63 623 aa14.96□□□□□ -0.02
PRAME-213ENST00000492657 NRAPQ86VF7 1730 aa14.95□□□□□ -0.02
PRAME-213ENST00000492657 IFIT3O14879 490 aaKnown RBP14.95□□□□□ -0.02
PRAME-213ENST00000492657 ZBTB43O43298 467 aa14.95□□□□□ -0.02
PRAME-213ENST00000492657 RANBP6O60518 1105 aaKnown RBP14.95□□□□□ -0.02
PRAME-213ENST00000492657 FMR1NBQ8N0W7 255 aaPredicted RBP14.95□□□□□ -0.02
PRAME-213ENST00000492657 PHLPP1O60346 1717 aa14.95□□□□□ -0.02
PRAME-213ENST00000492657 C4AP0C0L4 1744 aa14.95□□□□□ -0.02
PRAME-213ENST00000492657 C4BP0C0L5 1744 aa14.95□□□□□ -0.02
PRAME-213ENST00000492657 MARCKSP29966 332 aaPredicted RBP14.95□□□□□ -0.02
PRAME-213ENST00000492657 TDO2P48775 406 aa14.95□□□□□ -0.02
PRAME-213ENST00000492657 IQCB1Q15051 598 aa14.95□□□□□ -0.02
PRAME-213ENST00000492657 ADALQ6DHV7 355 aa14.95□□□□□ -0.02
PRAME-213ENST00000492657 MRPS27Q92552 414 aaKnown RBP14.95□□□□□ -0.02
PRAME-213ENST00000492657 ARAP2Q8WZ64 1704 aa14.94□□□□□ -0.02
PRAME-213ENST00000492657 GOLGA8AA7E2F4 631 aa14.94□□□□□ -0.02
PRAME-213ENST00000492657 SPTLC2O15270 562 aa14.94□□□□□ -0.02
PRAME-213ENST00000492657 CYP7A1P22680 504 aa14.94□□□□□ -0.02
PRAME-213ENST00000492657 NTRK3Q16288 839 aa14.94□□□□□ -0.02
PRAME-213ENST00000492657 AKNAD1Q5T1N1 836 aa14.94□□□□□ -0.02
PRAME-213ENST00000492657 KRT40Q6A162 431 aa14.94□□□□□ -0.02
PRAME-213ENST00000492657 ZNF75DP51815 510 aa14.94□□□□□ -0.02
PRAME-213ENST00000492657 SYNE3Q6ZMZ3 975 aa14.94□□□□□ -0.02
PRAME-213ENST00000492657 CCDC82Q8N4S0 544 aa14.94□□□□□ -0.02
PRAME-213ENST00000492657 TMEM87BQ96K49 555 aa14.94□□□□□ -0.02
PRAME-213ENST00000492657 ANO1Q5XXA6 986 aa14.93□□□□□ -0.02
PRAME-213ENST00000492657 MFSD6Q6ZSS7 791 aa14.93□□□□□ -0.02
PRAME-213ENST00000492657 BARGINQ6ZT62 677 aa14.93□□□□□ -0.02
PRAME-213ENST00000492657 CCDC186Q7Z3E2 898 aa14.93□□□□□ -0.02
PRAME-213ENST00000492657 DRC7Q8IY82 874 aa14.93□□□□□ -0.02
PRAME-213ENST00000492657 CMTR1Q8N1G2 835 aaKnown RBP14.93□□□□□ -0.02
PRAME-213ENST00000492657 SDR42E1Q8WUS8 393 aa14.93□□□□□ -0.02
PRAME-213ENST00000492657 SDF4Q9BRK5 362 aa14.93□□□□□ -0.02
PRAME-213ENST00000492657 CTAGE5O15320 804 aa14.93□□□□□ -0.02
PRAME-213ENST00000492657 LRMPQ12912 555 aa14.93□□□□□ -0.02
PRAME-213ENST00000492657 BRAPQ7Z569 592 aa14.93□□□□□ -0.02
PRAME-213ENST00000492657 MYRIPQ8NFW9 859 aa14.93□□□□□ -0.02
PRAME-213ENST00000492657 POLR3EQ9NVU0 708 aa14.93□□□□□ -0.02
PRAME-213ENST00000492657 DOCK2Q92608 1830 aa14.93□□□□□ -0.02
PRAME-213ENST00000492657 WDHD1O75717 1129 aaPredicted RBP14.93□□□□□ -0.02
PRAME-213ENST00000492657 GUCY1A2P33402 732 aa14.93□□□□□ -0.02
PRAME-213ENST00000492657 IARSP41252 1262 aaKnown RBP14.93□□□□□ -0.02
PRAME-213ENST00000492657 FAM182BQ5T319 152 aa14.93□□□□□ -0.02
PRAME-213ENST00000492657 VPS37DQ86XT2 251 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms