RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 RACK1P63244 317 aaKnown RBP4.26□□□□□ -1.73
SNX13-209ENST00000492626 IFRD2Q12894 506 aaPredicted RBP4.26□□□□□ -1.73
SNX13-209ENST00000492626 LDLRAD1Q5T700 205 aa4.26□□□□□ -1.73
SNX13-209ENST00000492626 POTEGQ6S5H5 508 aa4.26□□□□□ -1.73
SNX13-209ENST00000492626 RUBCNLQ9H714 662 aa4.26□□□□□ -1.73
SNX13-209ENST00000492626 LIN7BQ9HAP6 207 aa4.26□□□□□ -1.73
SNX13-209ENST00000492626 TMEM63CQ9P1W3 806 aa4.26□□□□□ -1.73
SNX13-209ENST00000492626 KANSL3Q9P2N6 904 aa4.26□□□□□ -1.73
SNX13-209ENST00000492626 EFR3BQ9Y2G0 817 aa4.26□□□□□ -1.73
SNX13-209ENST00000492626 H7C1W4 665 aa4.26□□□□□ -1.73
SNX13-209ENST00000492626 K7ELQ4 463 aaPredicted RBP4.26□□□□□ -1.73
SNX13-209ENST00000492626 KHNYNO15037 678 aaKnown RBP4.26□□□□□ -1.73
SNX13-209ENST00000492626 GJA8P48165 433 aa4.26□□□□□ -1.73
SNX13-209ENST00000492626 GRM2Q14416 872 aa4.26□□□□□ -1.73
SNX13-209ENST00000492626 MICALL1Q8N3F8 863 aa4.26□□□□□ -1.73
SNX13-209ENST00000492626 ANAPC16Q96DE5 110 aa4.26□□□□□ -1.73
SNX13-209ENST00000492626 FERD3LQ96RJ6 166 aa4.26□□□□□ -1.73
SNX13-209ENST00000492626 SRPK1Q96SB4 655 aaKnown RBP4.26□□□□□ -1.73
SNX13-209ENST00000492626 PLAURQ03405 335 aa4.25□□□□□ -1.73
SNX13-209ENST00000492626 SV2BQ7L1I2 683 aa4.25□□□□□ -1.73
SNX13-209ENST00000492626 PHF24Q9UPV7 400 aa4.25□□□□□ -1.73
SNX13-209ENST00000492626 RRBP1Q9P2E9 1410 aaKnown RBP4.25□□□□□ -1.73
SNX13-209ENST00000492626 MAN1A2O60476 641 aa4.25□□□□□ -1.73
SNX13-209ENST00000492626 KIAA0319Q5VV43 1072 aa4.25□□□□□ -1.73
SNX13-209ENST00000492626 TPTE2Q6XPS3 522 aa4.25□□□□□ -1.73
SNX13-209ENST00000492626 ZNF295-AS1Q8N0V1 137 aa4.25□□□□□ -1.73
SNX13-209ENST00000492626 TMEM74Q96NL1 305 aa4.25□□□□□ -1.73
SNX13-209ENST00000492626 SRA1Q9HD15 236 aaKnown RBP4.25□□□□□ -1.73
SNX13-209ENST00000492626 hCG_2014768A0A024R1R8 64 aa4.25□□□□□ -1.73
SNX13-209ENST00000492626 ATXN7O15265 892 aaPredicted RBP4.25□□□□□ -1.73
SNX13-209ENST00000492626 SASH3O75995 380 aa4.25□□□□□ -1.73
SNX13-209ENST00000492626 GHRHP01286 108 aa4.25□□□□□ -1.73
SNX13-209ENST00000492626 IGBP1P78318 339 aa4.25□□□□□ -1.73
SNX13-209ENST00000492626 RBL2Q08999 1139 aa4.25□□□□□ -1.73
SNX13-209ENST00000492626 TBC1D8BQ0IIM8 1120 aa4.25□□□□□ -1.73
SNX13-209ENST00000492626 TRIP4Q15650 581 aaPredicted RBP4.25□□□□□ -1.73
SNX13-209ENST00000492626 PCSK7Q16549 785 aa4.25□□□□□ -1.73
SNX13-209ENST00000492626 MRPL14Q6P1L8 145 aaKnown RBP4.25□□□□□ -1.73
SNX13-209ENST00000492626 EFCC1Q9HA90 598 aa4.25□□□□□ -1.73
SNX13-209ENST00000492626 SIRPGQ9P1W8 387 aa4.25□□□□□ -1.73
SNX13-209ENST00000492626 AFF2P51816 1311 aa4.24□□□□□ -1.73
SNX13-209ENST00000492626 TMEM238LA0A1B0GVL6 79 aa4.24□□□□□ -1.73
SNX13-209ENST00000492626 A0A1W2PP55 124 aa4.24□□□□□ -1.73
SNX13-209ENST00000492626 MCM4P33991 863 aa4.24□□□□□ -1.73
SNX13-209ENST00000492626 TNNI3KQ59H18 835 aa4.24□□□□□ -1.73
SNX13-209ENST00000492626 MCF2L2Q86YR7 1114 aa4.24□□□□□ -1.73
SNX13-209ENST00000492626 NKD1Q969G9 470 aa4.24□□□□□ -1.73
SNX13-209ENST00000492626 KCNMB2Q9Y691 235 aa4.24□□□□□ -1.73
SNX13-209ENST00000492626 TRPM2O94759 1503 aa4.24□□□□□ -1.73
SNX13-209ENST00000492626 CDC42BPAQ5VT25 1732 aa4.24□□□□□ -1.73
SNX13-209ENST00000492626 CCDC85CA6NKD9 419 aa4.24□□□□□ -1.73
SNX13-209ENST00000492626 LBRQ14739 615 aaKnown RBP4.24□□□□□ -1.73
SNX13-209ENST00000492626 ASAP3Q8TDY4 903 aa4.24□□□□□ -1.73
SNX13-209ENST00000492626 SRRTQ9BXP5 876 aaKnown RBP4.24□□□□□ -1.73
SNX13-209ENST00000492626 DMGDHQ9UI17 866 aaKnown RBP4.24□□□□□ -1.73
SNX13-209ENST00000492626 PRR12Q9ULL5 1215 aa4.24□□□□□ -1.73
SNX13-209ENST00000492626 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.24□□□□□ -1.73
SNX13-209ENST00000492626 XRN1Q8IZH2 1706 aaKnown RBP4.24□□□□□ -1.73
SNX13-209ENST00000492626 FAM83GA6ND36 823 aa4.24□□□□□ -1.73
SNX13-209ENST00000492626 ATP4AP20648 1035 aa4.24□□□□□ -1.73
SNX13-209ENST00000492626 FOXR1Q6PIV2 292 aa4.24□□□□□ -1.73
SNX13-209ENST00000492626 RNF217Q8TC41 542 aa4.24□□□□□ -1.73
SNX13-209ENST00000492626 ZNF296Q8WUU4 475 aaPredicted RBP4.24□□□□□ -1.73
SNX13-209ENST00000492626 PRDM10Q9NQV6 1147 aa4.24□□□□□ -1.73
SNX13-209ENST00000492626 DYRK1BQ9Y463 629 aa4.24□□□□□ -1.73
SNX13-209ENST00000492626 NRAPQ86VF7 1730 aa4.24□□□□□ -1.73
SNX13-209ENST00000492626 GLI3P10071 1580 aa4.24□□□□□ -1.73
SNX13-209ENST00000492626 LMTK2Q8IWU2 1503 aa4.23□□□□□ -1.73
SNX13-209ENST00000492626 EGFRP00533 1210 aa4.23□□□□□ -1.73
SNX13-209ENST00000492626 FGRP09769 529 aa4.23□□□□□ -1.73
SNX13-209ENST00000492626 SAMD5Q5TGI4 173 aa4.23□□□□□ -1.73
SNX13-209ENST00000492626 ANKS3Q6ZW76 656 aa4.23□□□□□ -1.73
SNX13-209ENST00000492626 ERMP1Q7Z2K6 904 aa4.23□□□□□ -1.73
SNX13-209ENST00000492626 OSMRQ99650 979 aa4.23□□□□□ -1.73
SNX13-209ENST00000492626 KLF16Q9BXK1 252 aaPredicted RBP4.23□□□□□ -1.73
SNX13-209ENST00000492626 COPRSQ9NQ92 184 aa4.23□□□□□ -1.73
SNX13-209ENST00000492626 PKD2L1Q9P0L9 805 aa4.23□□□□□ -1.73
SNX13-209ENST00000492626 CNTN3Q9P232 1028 aa4.23□□□□□ -1.73
SNX13-209ENST00000492626 PCDHGC4Q9Y5F7 938 aa4.23□□□□□ -1.73
SNX13-209ENST00000492626 ARHGAP5Q13017 1502 aa4.23□□□□□ -1.73
SNX13-209ENST00000492626 NFKB1P19838 968 aa4.23□□□□□ -1.73
SNX13-209ENST00000492626 MLECQ14165 292 aa4.23□□□□□ -1.73
SNX13-209ENST00000492626 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.23□□□□□ -1.73
SNX13-209ENST00000492626 MIR1-1HGQ9H1L0 117 aa4.23□□□□□ -1.73
SNX13-209ENST00000492626 CRISPLD1Q9H336 500 aa4.23□□□□□ -1.73
SNX13-209ENST00000492626 MRVI1Q9Y6F6 885 aa4.23□□□□□ -1.73
SNX13-209ENST00000492626 IQGAP3Q86VI3 1631 aa4.23□□□□□ -1.73
SNX13-209ENST00000492626 TNS2Q63HR2 1409 aa4.23□□□□□ -1.73
SNX13-209ENST00000492626 PNPLA6Q8IY17 1366 aa4.23□□□□□ -1.73
SNX13-209ENST00000492626 CCDC18Q5T9S5 1454 aa4.23□□□□□ -1.73
SNX13-209ENST00000492626 FBXO24O75426 580 aa4.23□□□□□ -1.73
SNX13-209ENST00000492626 SMPD1P17405 629 aa4.23□□□□□ -1.73
SNX13-209ENST00000492626 FAM160A1Q05DH4 1040 aa4.23□□□□□ -1.73
SNX13-209ENST00000492626 LRRC14Q15048 493 aa4.23□□□□□ -1.73
SNX13-209ENST00000492626 OR13H1Q8NG92 308 aa4.23□□□□□ -1.73
SNX13-209ENST00000492626 RASGRP4Q8TDF6 673 aa4.23□□□□□ -1.73
SNX13-209ENST00000492626 HPS1Q92902 700 aa4.23□□□□□ -1.73
SNX13-209ENST00000492626 TMX1Q9H3N1 280 aa4.23□□□□□ -1.73
SNX13-209ENST00000492626 IGFLR1Q9H665 355 aa4.23□□□□□ -1.73
SNX13-209ENST00000492626 CBX8Q9HC52 389 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms