RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 SIAH1Q8IUQ4 282 aa5.37□□□□□ -1.55
HMGB1P30-201ENST00000492455 ZKSCAN3Q9BRR0 538 aa5.37□□□□□ -1.55
HMGB1P30-201ENST00000492455 FAM105AQ9NUU6 356 aa5.37□□□□□ -1.55
HMGB1P30-201ENST00000492455 GNEQ9Y223 722 aaKnown RBP5.37□□□□□ -1.55
HMGB1P30-201ENST00000492455 ZBTB39O15060 712 aa5.36□□□□□ -1.55
HMGB1P30-201ENST00000492455 ZSCAN22P10073 491 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P30-201ENST00000492455 CFPP27918 469 aa5.36□□□□□ -1.55
HMGB1P30-201ENST00000492455 ANGEL2Q5VTE6 544 aaKnown RBP5.36□□□□□ -1.55
HMGB1P30-201ENST00000492455 WFDC3Q8IUB2 231 aa5.36□□□□□ -1.55
HMGB1P30-201ENST00000492455 PLD6Q8N2A8 252 aaKnown RBP5.36□□□□□ -1.55
HMGB1P30-201ENST00000492455 DDX54Q8TDD1 881 aaKnown RBP5.36□□□□□ -1.55
HMGB1P30-201ENST00000492455 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P30-201ENST00000492455 MAOBP27338 520 aa5.35□□□□□ -1.55
HMGB1P30-201ENST00000492455 DNM1Q05193 864 aaKnown RBP5.35□□□□□ -1.55
HMGB1P30-201ENST00000492455 POU4F3Q15319 338 aa5.35□□□□□ -1.55
HMGB1P30-201ENST00000492455 HRASLS5Q96KN8 279 aa5.35□□□□□ -1.55
HMGB1P30-201ENST00000492455 BHLHE41Q9C0J9 482 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P30-201ENST00000492455 LGR6Q9HBX8 967 aa5.35□□□□□ -1.55
HMGB1P30-201ENST00000492455 C1GALT1Q9NS00 363 aa5.35□□□□□ -1.55
HMGB1P30-201ENST00000492455 SEPT3Q9UH03 358 aa5.35□□□□□ -1.55
HMGB1P30-201ENST00000492455 ADAMTS6Q9UKP5 1117 aa5.35□□□□□ -1.55
HMGB1P30-201ENST00000492455 IVNS1ABPQ9Y6Y0 642 aa5.35□□□□□ -1.55
HMGB1P30-201ENST00000492455 SERPINB4P48594 390 aa5.34□□□□□ -1.55
HMGB1P30-201ENST00000492455 IFI16Q16666 785 aaKnown RBP5.34□□□□□ -1.55
HMGB1P30-201ENST00000492455 SLC23A3Q6PIS1 610 aa5.34□□□□□ -1.55
HMGB1P30-201ENST00000492455 FAM181AQ8N9Y4 354 aa5.34□□□□□ -1.55
HMGB1P30-201ENST00000492455 FLAD1Q8NFF5 587 aa5.34□□□□□ -1.55
HMGB1P30-201ENST00000492455 EDEM1Q92611 657 aa5.34□□□□□ -1.55
HMGB1P30-201ENST00000492455 CORO1BQ9BR76 489 aa5.34□□□□□ -1.55
HMGB1P30-201ENST00000492455 LMCD1Q9NZU5 365 aa5.34□□□□□ -1.55
HMGB1P30-201ENST00000492455 RAPGEFL1Q9UHV5 662 aa5.34□□□□□ -1.55
HMGB1P30-201ENST00000492455 PHACTR2O75167 634 aa5.33□□□□□ -1.56
HMGB1P30-201ENST00000492455 FAM87AP0C7U9 286 aa5.33□□□□□ -1.56
HMGB1P30-201ENST00000492455 AOC3Q16853 763 aa5.33□□□□□ -1.56
HMGB1P30-201ENST00000492455 B4GALNT3Q6L9W6 998 aa5.33□□□□□ -1.56
HMGB1P30-201ENST00000492455 SEZ6L2Q6UXD5 910 aa5.33□□□□□ -1.56
HMGB1P30-201ENST00000492455 ATCAYQ86WG3 371 aa5.33□□□□□ -1.56
HMGB1P30-201ENST00000492455 CHRDQ9H2X0 955 aa5.33□□□□□ -1.56
HMGB1P30-201ENST00000492455 TMEM265A0A087WTH1 108 aa5.32□□□□□ -1.56
HMGB1P30-201ENST00000492455 NFIBO00712 420 aa5.32□□□□□ -1.56
HMGB1P30-201ENST00000492455 BUD31P41223 144 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P30-201ENST00000492455 ECM1Q16610 540 aa5.32□□□□□ -1.56
HMGB1P30-201ENST00000492455 LCNL1Q6ZST4 164 aa5.32□□□□□ -1.56
HMGB1P30-201ENST00000492455 SYDE1Q6ZW31 735 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P30-201ENST00000492455 PIDD1Q9HB75 910 aa5.32□□□□□ -1.56
HMGB1P30-201ENST00000492455 EREGO14944 169 aa5.31□□□□□ -1.56
HMGB1P30-201ENST00000492455 DYNC1LI2O43237 492 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P30-201ENST00000492455 CD96P40200 585 aa5.31□□□□□ -1.56
HMGB1P30-201ENST00000492455 HNRNPUQ00839 825 aaKnown RBP eCLIP5.31□□□□□ -1.56
HMGB1P30-201ENST00000492455 PCDH1Q08174 1060 aa5.31□□□□□ -1.56
HMGB1P30-201ENST00000492455 PDE3AQ14432 1141 aa5.31□□□□□ -1.56
HMGB1P30-201ENST00000492455 MPZL3Q6UWV2 235 aa5.31□□□□□ -1.56
HMGB1P30-201ENST00000492455 TTLL10Q6ZVT0 673 aa5.31□□□□□ -1.56
HMGB1P30-201ENST00000492455 CILP2Q8IUL8 1156 aa5.31□□□□□ -1.56
HMGB1P30-201ENST00000492455 SNX29Q8TEQ0 813 aa5.31□□□□□ -1.56
HMGB1P30-201ENST00000492455 NRSN2Q9GZP1 204 aa5.31□□□□□ -1.56
HMGB1P30-201ENST00000492455 GZF1Q9H116 711 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P30-201ENST00000492455 MKNK2Q9HBH9 465 aa5.31□□□□□ -1.56
HMGB1P30-201ENST00000492455 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.31□□□□□ -1.56
HMGB1P30-201ENST00000492455 ZBTB7CA1YPR0 619 aa5.3□□□□□ -1.56
HMGB1P30-201ENST00000492455 PDGFAP04085 211 aa5.3□□□□□ -1.56
HMGB1P30-201ENST00000492455 CEACAM5P06731 702 aa5.3□□□□□ -1.56
HMGB1P30-201ENST00000492455 CDK5R2Q13319 367 aa5.3□□□□□ -1.56
HMGB1P30-201ENST00000492455 ZNF211Q13398 564 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P30-201ENST00000492455 MTMR3Q13615 1198 aa5.3□□□□□ -1.56
HMGB1P30-201ENST00000492455 C1QL4Q86Z23 238 aa5.3□□□□□ -1.56
HMGB1P30-201ENST00000492455 GTF3C2Q8WUA4 911 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P30-201ENST00000492455 CLEC4MQ9H2X3 399 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P30-201ENST00000492455 GGNBP2Q9H3C7 697 aa5.3□□□□□ -1.56
HMGB1P30-201ENST00000492455 GSX1Q9H4S2 264 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P30-201ENST00000492455 PODXL2Q9NZ53 605 aa5.3□□□□□ -1.56
HMGB1P30-201ENST00000492455 ZNF503-AS2A6NEH8 195 aa5.29□□□□□ -1.56
HMGB1P30-201ENST00000492455 A6NHS1 94 aa5.29□□□□□ -1.56
HMGB1P30-201ENST00000492455 SOWAHDA6NJG2 315 aa5.29□□□□□ -1.56
HMGB1P30-201ENST00000492455 PATL2C9JE40 543 aaKnown RBP5.29□□□□□ -1.56
HMGB1P30-201ENST00000492455 MZF1P28698 734 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P30-201ENST00000492455 AFMP43652 599 aa5.29□□□□□ -1.56
HMGB1P30-201ENST00000492455 EHHADHQ08426 723 aa5.29□□□□□ -1.56
HMGB1P30-201ENST00000492455 NOM1Q5C9Z4 860 aaKnown RBP5.29□□□□□ -1.56
HMGB1P30-201ENST00000492455 ANO2Q9NQ90 1003 aa5.29□□□□□ -1.56
HMGB1P30-201ENST00000492455 AMOTL2Q9Y2J4 779 aa5.29□□□□□ -1.56
HMGB1P30-201ENST00000492455 A0A096LPE4 126 aa5.28□□□□□ -1.56
HMGB1P30-201ENST00000492455 A0A1W2PPZ6 126 aa5.28□□□□□ -1.56
HMGB1P30-201ENST00000492455 AOC2O75106 756 aa5.28□□□□□ -1.56
HMGB1P30-201ENST00000492455 CTSWP56202 376 aa5.28□□□□□ -1.56
HMGB1P30-201ENST00000492455 IKZF1Q13422 519 aa5.28□□□□□ -1.56
HMGB1P30-201ENST00000492455 SND1Q7KZF4 910 aaKnown RBP eCLIP5.28□□□□□ -1.56
HMGB1P30-201ENST00000492455 LIN37Q96GY3 246 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P30-201ENST00000492455 ATXN3LQ9H3M9 355 aa5.28□□□□□ -1.56
HMGB1P30-201ENST00000492455 CRIM1Q9NZV1 1036 aa5.28□□□□□ -1.56
HMGB1P30-201ENST00000492455 EGFL7Q9UHF1 273 aa5.28□□□□□ -1.56
HMGB1P30-201ENST00000492455 METTL12A8MUP2 240 aa5.27□□□□□ -1.57
HMGB1P30-201ENST00000492455 ICMTO60725 284 aa5.27□□□□□ -1.57
HMGB1P30-201ENST00000492455 TNFRSF21O75509 655 aa5.27□□□□□ -1.57
HMGB1P30-201ENST00000492455 CTSBP07858 339 aa5.27□□□□□ -1.57
HMGB1P30-201ENST00000492455 NPR3P17342 541 aa5.27□□□□□ -1.57
HMGB1P30-201ENST00000492455 ITIH2P19823 946 aa5.27□□□□□ -1.57
HMGB1P30-201ENST00000492455 AAMPQ13685 434 aa5.27□□□□□ -1.57
HMGB1P30-201ENST00000492455 HELQQ8TDG4 1101 aa5.27□□□□□ -1.57
HMGB1P30-201ENST00000492455 ASB11Q8WXH4 323 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms