RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 GATA6Q92908 595 aa6.72□□□□□ -1.33
VTA1-204ENST00000491881 ALKBH8Q96BT7 664 aaKnown RBP6.72□□□□□ -1.33
VTA1-204ENST00000491881 NIF3L1Q9GZT8 377 aa6.72□□□□□ -1.33
VTA1-204ENST00000491881 ACTL7BQ9Y614 415 aa6.72□□□□□ -1.33
VTA1-204ENST00000491881 ZNF765Q7L2R6 523 aa6.71□□□□□ -1.34
VTA1-204ENST00000491881 NPAS4Q8IUM7 802 aa6.71□□□□□ -1.34
VTA1-204ENST00000491881 AMOTL2Q9Y2J4 779 aa6.71□□□□□ -1.34
VTA1-204ENST00000491881 METTL12A8MUP2 240 aa6.7□□□□□ -1.34
VTA1-204ENST00000491881 MAPK8P45983 427 aa6.7□□□□□ -1.34
VTA1-204ENST00000491881 AKAP4Q5JQC9 854 aa6.7□□□□□ -1.34
VTA1-204ENST00000491881 HP1BP3Q5SSJ5 553 aaPredicted RBP6.7□□□□□ -1.34
VTA1-204ENST00000491881 DYMQ7RTS9 669 aa6.7□□□□□ -1.34
VTA1-204ENST00000491881 BCL2L13Q9BXK5 485 aa6.7□□□□□ -1.34
VTA1-204ENST00000491881 NRSN2Q9GZP1 204 aa6.7□□□□□ -1.34
VTA1-204ENST00000491881 SEMA6CQ9H3T2 930 aa6.7□□□□□ -1.34
VTA1-204ENST00000491881 LATS2Q9NRM7 1088 aa6.7□□□□□ -1.34
VTA1-204ENST00000491881 FOXD3Q9UJU5 478 aaPredicted RBP6.7□□□□□ -1.34
VTA1-204ENST00000491881 SLC5A6Q9Y289 635 aa6.7□□□□□ -1.34
VTA1-204ENST00000491881 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.69□□□□□ -1.34
VTA1-204ENST00000491881 PAPLNO95428 1278 aa6.69□□□□□ -1.34
VTA1-204ENST00000491881 IGHA2P01877 340 aa6.69□□□□□ -1.34
VTA1-204ENST00000491881 CYP11A1P05108 521 aa6.69□□□□□ -1.34
VTA1-204ENST00000491881 P4HBP07237 508 aaKnown RBP6.69□□□□□ -1.34
VTA1-204ENST00000491881 MAOBP27338 520 aa6.69□□□□□ -1.34
VTA1-204ENST00000491881 ATP2B2Q01814 1243 aa6.69□□□□□ -1.34
VTA1-204ENST00000491881 FMR1Q06787 632 aaKnown RBP eCLIP6.69□□□□□ -1.34
VTA1-204ENST00000491881 DSC3Q14574 896 aa6.69□□□□□ -1.34
VTA1-204ENST00000491881 PLCL1Q15111 1095 aa6.69□□□□□ -1.34
VTA1-204ENST00000491881 EAPPQ56P03 285 aaPredicted RBP6.69□□□□□ -1.34
VTA1-204ENST00000491881 PEAR1Q5VY43 1037 aaPredicted RBP6.69□□□□□ -1.34
VTA1-204ENST00000491881 RAD18Q9NS91 495 aa6.69□□□□□ -1.34
VTA1-204ENST00000491881 BIN1O00499 593 aa6.68□□□□□ -1.34
VTA1-204ENST00000491881 PCDH1Q08174 1060 aa6.68□□□□□ -1.34
VTA1-204ENST00000491881 ORC1Q13415 861 aa6.68□□□□□ -1.34
VTA1-204ENST00000491881 POU4F3Q15319 338 aa6.68□□□□□ -1.34
VTA1-204ENST00000491881 ZNF648Q5T619 568 aaPredicted RBP6.68□□□□□ -1.34
VTA1-204ENST00000491881 KRTAP4-9Q9BYQ8 210 aa6.68□□□□□ -1.34
VTA1-204ENST00000491881 ZFYVE1Q9HBF4 777 aa6.68□□□□□ -1.34
VTA1-204ENST00000491881 FAM105AQ9NUU6 356 aa6.68□□□□□ -1.34
VTA1-204ENST00000491881 AP4E1Q9UPM8 1137 aa6.68□□□□□ -1.34
VTA1-204ENST00000491881 PNMA6FA0A0J9YX94 578 aa6.67□□□□□ -1.34
VTA1-204ENST00000491881 EIF1AYO14602 144 aaKnown RBP6.67□□□□□ -1.34
VTA1-204ENST00000491881 CPNE3O75131 537 aaKnown RBP6.67□□□□□ -1.34
VTA1-204ENST00000491881 ASPAP45381 313 aa6.67□□□□□ -1.34
VTA1-204ENST00000491881 FGD1P98174 961 aa6.67□□□□□ -1.34
VTA1-204ENST00000491881 ZNF574Q6ZN55 896 aaPredicted RBP6.67□□□□□ -1.34
VTA1-204ENST00000491881 STK11IPQ8N1F8 1099 aa6.67□□□□□ -1.34
VTA1-204ENST00000491881 BCL7CQ8WUZ0 217 aaPredicted RBP6.67□□□□□ -1.34
VTA1-204ENST00000491881 CSRNP1Q96S65 589 aa6.67□□□□□ -1.34
VTA1-204ENST00000491881 BCL11AQ9H165 835 aa6.67□□□□□ -1.34
VTA1-204ENST00000491881 DNAJC25Q9H1X3 360 aa6.67□□□□□ -1.34
VTA1-204ENST00000491881 CLEC4MQ9H2X3 399 aaPredicted RBP6.67□□□□□ -1.34
VTA1-204ENST00000491881 ACSS3Q9H6R3 686 aa6.67□□□□□ -1.34
VTA1-204ENST00000491881 A0A096LPE4 126 aa6.66□□□□□ -1.34
VTA1-204ENST00000491881 A0A1W2PPZ6 126 aa6.66□□□□□ -1.34
VTA1-204ENST00000491881 LDHBP07195 334 aaKnown RBP6.66□□□□□ -1.34
VTA1-204ENST00000491881 CTSBP07858 339 aa6.66□□□□□ -1.34
VTA1-204ENST00000491881 ENOX2Q16206 610 aaKnown RBP6.66□□□□□ -1.34
VTA1-204ENST00000491881 ZNF423Q2M1K9 1284 aa6.66□□□□□ -1.34
VTA1-204ENST00000491881 ZNF792Q3KQV3 632 aa6.66□□□□□ -1.34
VTA1-204ENST00000491881 ZNF326Q5BKZ1 582 aaKnown RBP6.66□□□□□ -1.34
VTA1-204ENST00000491881 GIPC2Q8TF65 315 aa6.66□□□□□ -1.34
VTA1-204ENST00000491881 CORO1BQ9BR76 489 aa6.66□□□□□ -1.34
VTA1-204ENST00000491881 DAGLAQ9Y4D2 1042 aa6.66□□□□□ -1.34
VTA1-204ENST00000491881 ZNF124Q15973 351 aa6.65□□□□□ -1.34
VTA1-204ENST00000491881 ALG1LQ6GMV1 187 aa6.65□□□□□ -1.34
VTA1-204ENST00000491881 OGFOD3Q6PK18 319 aa6.65□□□□□ -1.34
VTA1-204ENST00000491881 DDX54Q8TDD1 881 aaKnown RBP6.65□□□□□ -1.34
VTA1-204ENST00000491881 LGR6Q9HBX8 967 aa6.65□□□□□ -1.34
VTA1-204ENST00000491881 ZFYVE28Q9HCC9 887 aa6.65□□□□□ -1.34
VTA1-204ENST00000491881 C1GALT1Q9NS00 363 aa6.65□□□□□ -1.34
VTA1-204ENST00000491881 POLR3DP05423 398 aaPredicted RBP6.64□□□□□ -1.35
VTA1-204ENST00000491881 CYP27C1Q4G0S4 372 aa6.64□□□□□ -1.35
VTA1-204ENST00000491881 SEZ6L2Q6UXD5 910 aa6.64□□□□□ -1.35
VTA1-204ENST00000491881 SPRED2Q7Z698 418 aa6.64□□□□□ -1.35
VTA1-204ENST00000491881 FBXO33Q7Z6M2 555 aa6.64□□□□□ -1.35
VTA1-204ENST00000491881 MISP3Q96FF7 219 aa6.64□□□□□ -1.35
VTA1-204ENST00000491881 LIN7BQ9HAP6 207 aa6.64□□□□□ -1.35
VTA1-204ENST00000491881 DYNC1LI2O43237 492 aaPredicted RBP6.63□□□□□ -1.35
VTA1-204ENST00000491881 PRPF40AO75400 957 aaKnown RBP6.63□□□□□ -1.35
VTA1-204ENST00000491881 GRIA4P48058 902 aa6.63□□□□□ -1.35
VTA1-204ENST00000491881 SPRED3Q2MJR0 410 aa6.63□□□□□ -1.35
VTA1-204ENST00000491881 USPL1Q5W0Q7 1092 aa6.63□□□□□ -1.35
VTA1-204ENST00000491881 CCNJLQ8IV13 435 aa6.63□□□□□ -1.35
VTA1-204ENST00000491881 FBF1Q8TES7 1133 aa6.63□□□□□ -1.35
VTA1-204ENST00000491881 NLRP2Q9NX02 1062 aa6.63□□□□□ -1.35
VTA1-204ENST00000491881 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.63□□□□□ -1.35
VTA1-204ENST00000491881 CARMIL2Q6F5E8 1435 aa6.62□□□□□ -1.35
VTA1-204ENST00000491881 A0A1W2PP55 124 aa6.62□□□□□ -1.35
VTA1-204ENST00000491881 RBM47A0AV96 593 aaKnown RBP6.62□□□□□ -1.35
VTA1-204ENST00000491881 DBX1A6NMT0 343 aa6.62□□□□□ -1.35
VTA1-204ENST00000491881 AOC2O75106 756 aa6.62□□□□□ -1.35
VTA1-204ENST00000491881 FARP2O94887 1054 aaPredicted RBP6.62□□□□□ -1.35
VTA1-204ENST00000491881 ECEL1O95672 775 aa6.62□□□□□ -1.35
VTA1-204ENST00000491881 BNIP3Q12983 259 aa6.62□□□□□ -1.35
VTA1-204ENST00000491881 PDE3AQ14432 1141 aa6.62□□□□□ -1.35
VTA1-204ENST00000491881 PKN1Q16512 942 aa6.62□□□□□ -1.35
VTA1-204ENST00000491881 ATG4DQ86TL0 474 aaPredicted RBP6.62□□□□□ -1.35
VTA1-204ENST00000491881 WFDC3Q8IUB2 231 aa6.62□□□□□ -1.35
VTA1-204ENST00000491881 CCDC74AQ96AQ1 378 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms