RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 MAST3O60307 1309 aa13.67□□□□□ -0.22
TMEM39A-211ENST00000491685 GNAI3P08754 354 aa13.67□□□□□ -0.22
TMEM39A-211ENST00000491685 TRIM27P14373 513 aa13.67□□□□□ -0.22
TMEM39A-211ENST00000491685 INHBEP58166 350 aa13.67□□□□□ -0.22
TMEM39A-211ENST00000491685 INTS3Q68E01 1043 aaKnown RBP13.67□□□□□ -0.22
TMEM39A-211ENST00000491685 BRI3BPQ8WY22 251 aa13.67□□□□□ -0.22
TMEM39A-211ENST00000491685 OTUD5Q96G74 571 aa13.67□□□□□ -0.22
TMEM39A-211ENST00000491685 TRIM17Q9Y577 477 aa13.67□□□□□ -0.22
TMEM39A-211ENST00000491685 CENPFP49454 3210 aa13.67□□□□□ -0.22
TMEM39A-211ENST00000491685 MAP3K9P80192 1104 aa13.66□□□□□ -0.22
TMEM39A-211ENST00000491685 NFIAQ12857 509 aa13.66□□□□□ -0.22
TMEM39A-211ENST00000491685 PDE3AQ14432 1141 aa13.66□□□□□ -0.22
TMEM39A-211ENST00000491685 HHIPL2Q6UWX4 724 aa13.66□□□□□ -0.22
TMEM39A-211ENST00000491685 OTOP1Q7RTM1 612 aa13.66□□□□□ -0.22
TMEM39A-211ENST00000491685 FAM43AQ8N2R8 423 aa13.66□□□□□ -0.22
TMEM39A-211ENST00000491685 CD99L2Q8TCZ2 262 aa13.66□□□□□ -0.22
TMEM39A-211ENST00000491685 ZKSCAN4Q969J2 545 aaPredicted RBP13.66□□□□□ -0.22
TMEM39A-211ENST00000491685 TMOD2Q9NZR1 351 aa13.66□□□□□ -0.22
TMEM39A-211ENST00000491685 SUGT1Q9Y2Z0 365 aa13.66□□□□□ -0.22
TMEM39A-211ENST00000491685 PHIPQ8WWQ0 1821 aa13.66□□□□□ -0.22
TMEM39A-211ENST00000491685 PTPRFP10586 1907 aa13.65□□□□□ -0.22
TMEM39A-211ENST00000491685 CCL15-CCL14A0A0B4J2E2 113 aa13.65□□□□□ -0.22
TMEM39A-211ENST00000491685 IL15P40933 162 aaPredicted RBP13.65□□□□□ -0.22
TMEM39A-211ENST00000491685 CCL15Q16663 113 aa13.65□□□□□ -0.22
TMEM39A-211ENST00000491685 CDC42EP5Q6NZY7 148 aa13.65□□□□□ -0.22
TMEM39A-211ENST00000491685 FAM83AQ86UY5 434 aa13.65□□□□□ -0.22
TMEM39A-211ENST00000491685 WDR66Q8TBY9 1149 aa13.65□□□□□ -0.22
TMEM39A-211ENST00000491685 WRNIP1Q96S55 665 aa13.65□□□□□ -0.22
TMEM39A-211ENST00000491685 MRIQ9BWK5 157 aa13.65□□□□□ -0.22
TMEM39A-211ENST00000491685 COPRSQ9NQ92 184 aa13.65□□□□□ -0.22
TMEM39A-211ENST00000491685 CEP126Q9P2H0 1117 aa13.65□□□□□ -0.22
TMEM39A-211ENST00000491685 FBXO3Q9UK99 471 aa13.65□□□□□ -0.22
TMEM39A-211ENST00000491685 RFX7Q2KHR2 1363 aa13.65□□□□□ -0.22
TMEM39A-211ENST00000491685 DOCK1Q14185 1865 aa13.65□□□□□ -0.22
TMEM39A-211ENST00000491685 MYO5AQ9Y4I1 1855 aaKnown RBP13.65□□□□□ -0.22
TMEM39A-211ENST00000491685 MAST2Q6P0Q8 1798 aa13.64□□□□□ -0.23
TMEM39A-211ENST00000491685 SPDYE5A6NIY4 337 aa13.64□□□□□ -0.23
TMEM39A-211ENST00000491685 TCP10Q12799 353 aa13.64□□□□□ -0.23
TMEM39A-211ENST00000491685 FKBP1CQ5VVH2 108 aa13.64□□□□□ -0.23
TMEM39A-211ENST00000491685 MIGA2Q7L4E1 593 aa13.64□□□□□ -0.23
TMEM39A-211ENST00000491685 CSADQ9Y600 493 aa13.64□□□□□ -0.23
TMEM39A-211ENST00000491685 BRCA2P51587 3418 aa13.64□□□□□ -0.23
TMEM39A-211ENST00000491685 SALL1Q9NSC2 1324 aa13.64□□□□□ -0.23
TMEM39A-211ENST00000491685 CDK5RAP2Q96SN8 1893 aa13.63□□□□□ -0.23
TMEM39A-211ENST00000491685 ATRNL1Q5VV63 1379 aa13.63□□□□□ -0.23
TMEM39A-211ENST00000491685 ATAD5Q96QE3 1844 aa13.63□□□□□ -0.23
TMEM39A-211ENST00000491685 INPP5BP32019 993 aa13.63□□□□□ -0.23
TMEM39A-211ENST00000491685 TIMM10P62072 90 aa13.63□□□□□ -0.23
TMEM39A-211ENST00000491685 RASGRF1Q13972 1273 aa13.63□□□□□ -0.23
TMEM39A-211ENST00000491685 CCDC102BQ68D86 513 aa13.63□□□□□ -0.23
TMEM39A-211ENST00000491685 ITPRIPQ8IWB1 547 aa13.63□□□□□ -0.23
TMEM39A-211ENST00000491685 ZFPM1Q8IX07 1006 aa13.63□□□□□ -0.23
TMEM39A-211ENST00000491685 FAM198AQ9UFP1 575 aa13.63□□□□□ -0.23
TMEM39A-211ENST00000491685 MGAMO43451 1857 aa13.62□□□□□ -0.23
TMEM39A-211ENST00000491685 IRF6O14896 467 aa13.62□□□□□ -0.23
TMEM39A-211ENST00000491685 SRGAP3O43295 1099 aa13.62□□□□□ -0.23
TMEM39A-211ENST00000491685 LDHBP07195 334 aaKnown RBP13.62□□□□□ -0.23
TMEM39A-211ENST00000491685 SLURP2P0DP57 97 aa13.62□□□□□ -0.23
TMEM39A-211ENST00000491685 GTF2A2P52657 109 aa13.62□□□□□ -0.23
TMEM39A-211ENST00000491685 TFCP2Q12800 502 aa13.62□□□□□ -0.23
TMEM39A-211ENST00000491685 TAF1CQ15572 869 aaPredicted RBP13.62□□□□□ -0.23
TMEM39A-211ENST00000491685 OTUD7BQ6GQQ9 843 aa13.62□□□□□ -0.23
TMEM39A-211ENST00000491685 TMEM57Q8N5G2 664 aa13.62□□□□□ -0.23
TMEM39A-211ENST00000491685 FAM151AQ8WW52 585 aa13.62□□□□□ -0.23
TMEM39A-211ENST00000491685 ERO1AQ96HE7 468 aa13.62□□□□□ -0.23
TMEM39A-211ENST00000491685 DDX19BQ9UMR2 479 aa13.62□□□□□ -0.23
TMEM39A-211ENST00000491685 PTPN22Q9Y2R2 807 aa13.62□□□□□ -0.23
TMEM39A-211ENST00000491685 SIPA1L1O43166 1804 aa13.62□□□□□ -0.23
TMEM39A-211ENST00000491685 A0A1B0GUL7 405 aa13.61□□□□□ -0.23
TMEM39A-211ENST00000491685 POTEFA5A3E0 1075 aa13.61□□□□□ -0.23
TMEM39A-211ENST00000491685 SP3Q02447 781 aa13.61□□□□□ -0.23
TMEM39A-211ENST00000491685 MTX1Q13505 466 aa13.61□□□□□ -0.23
TMEM39A-211ENST00000491685 ERO1BQ86YB8 467 aa13.61□□□□□ -0.23
TMEM39A-211ENST00000491685 ZNF341Q9BYN7 854 aa13.61□□□□□ -0.23
TMEM39A-211ENST00000491685 USP40Q9NVE5 1235 aa13.61□□□□□ -0.23
TMEM39A-211ENST00000491685 DENND2AQ9ULE3 1009 aa13.61□□□□□ -0.23
TMEM39A-211ENST00000491685 GAKO14976 1311 aa13.61□□□□□ -0.23
TMEM39A-211ENST00000491685 KIAA0100Q14667 2235 aaKnown RBP13.6□□□□□ -0.23
TMEM39A-211ENST00000491685 FOCADQ5VW36 1801 aa13.6□□□□□ -0.23
TMEM39A-211ENST00000491685 PNMA6EA0A0J9YXQ4 647 aa13.6□□□□□ -0.23
TMEM39A-211ENST00000491685 BTBD19C9JJ37 291 aa13.6□□□□□ -0.23
TMEM39A-211ENST00000491685 SEMA3EO15041 775 aa13.6□□□□□ -0.23
TMEM39A-211ENST00000491685 GNAI2P04899 355 aa13.6□□□□□ -0.23
TMEM39A-211ENST00000491685 FXR1P51114 621 aaKnown RBP eCLIP13.6□□□□□ -0.23
TMEM39A-211ENST00000491685 PPIL2Q13356 520 aa13.6□□□□□ -0.23
TMEM39A-211ENST00000491685 DCAF15Q66K64 600 aa13.6□□□□□ -0.23
TMEM39A-211ENST00000491685 PI16Q6UXB8 463 aa13.6□□□□□ -0.23
TMEM39A-211ENST00000491685 SH3BP5LQ7L8J4 393 aa13.6□□□□□ -0.23
TMEM39A-211ENST00000491685 ZNF384Q8TF68 577 aa13.6□□□□□ -0.23
TMEM39A-211ENST00000491685 XAGE2Q96GT9 111 aa13.6□□□□□ -0.23
TMEM39A-211ENST00000491685 ARHGAP39Q9C0H5 1083 aa13.6□□□□□ -0.23
TMEM39A-211ENST00000491685 GNL3LQ9NVN8 582 aaKnown RBP13.6□□□□□ -0.23
TMEM39A-211ENST00000491685 SUPT16HQ9Y5B9 1047 aaKnown RBP13.6□□□□□ -0.23
TMEM39A-211ENST00000491685 ZBTB7BO15156 539 aaPredicted RBP13.59□□□□□ -0.23
TMEM39A-211ENST00000491685 RGS3P49796 1198 aa13.59□□□□□ -0.23
TMEM39A-211ENST00000491685 RRP1P56182 461 aaKnown RBP13.59□□□□□ -0.23
TMEM39A-211ENST00000491685 PANK1Q8TE04 598 aa13.59□□□□□ -0.23
TMEM39A-211ENST00000491685 HOOK2Q96ED9 719 aa13.59□□□□□ -0.23
TMEM39A-211ENST00000491685 EFCC1Q9HA90 598 aa13.59□□□□□ -0.23
TMEM39A-211ENST00000491685 ZFYVE28Q9HCC9 887 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms