RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 SEZ6L2Q6UXD5 910 aa8.38□□□□□ -1.07
PHC3-213ENST00000491258 KRTAP4-2Q9BYR5 136 aa8.38□□□□□ -1.07
PHC3-213ENST00000491258 GSX1Q9H4S2 264 aaPredicted RBP8.38□□□□□ -1.07
PHC3-213ENST00000491258 SLC5A6Q9Y289 635 aa8.38□□□□□ -1.07
PHC3-213ENST00000491258 NDUFB5O43674 189 aa8.37□□□□□ -1.07
PHC3-213ENST00000491258 CPNE3O75131 537 aaKnown RBP8.37□□□□□ -1.07
PHC3-213ENST00000491258 JAG1P78504 1218 aa8.37□□□□□ -1.07
PHC3-213ENST00000491258 AP3B2Q13367 1082 aa8.37□□□□□ -1.07
PHC3-213ENST00000491258 OGFOD3Q6PK18 319 aa8.37□□□□□ -1.07
PHC3-213ENST00000491258 PPP1R9AQ9ULJ8 1098 aa8.37□□□□□ -1.07
PHC3-213ENST00000491258 LIG1P18858 919 aa8.36□□□□□ -1.07
PHC3-213ENST00000491258 SERPINB4P48594 390 aa8.36□□□□□ -1.07
PHC3-213ENST00000491258 PLCL1Q15111 1095 aa8.36□□□□□ -1.07
PHC3-213ENST00000491258 ZNF574Q6ZN55 896 aaPredicted RBP8.36□□□□□ -1.07
PHC3-213ENST00000491258 BCL7CQ8WUZ0 217 aaPredicted RBP8.36□□□□□ -1.07
PHC3-213ENST00000491258 ZC3H12CQ9C0D7 883 aaKnown RBP8.36□□□□□ -1.07
PHC3-213ENST00000491258 GADD45BO75293 160 aaPredicted RBP8.35□□□□□ -1.07
PHC3-213ENST00000491258 ZNF157P51786 506 aaPredicted RBP8.35□□□□□ -1.07
PHC3-213ENST00000491258 PDE3BQ13370 1112 aa8.35□□□□□ -1.07
PHC3-213ENST00000491258 CYP27C1Q4G0S4 372 aa8.35□□□□□ -1.07
PHC3-213ENST00000491258 B4GALNT3Q6L9W6 998 aa8.35□□□□□ -1.07
PHC3-213ENST00000491258 PIDD1Q9HB75 910 aa8.35□□□□□ -1.07
PHC3-213ENST00000491258 TMPRSS2O15393 492 aa8.34□□□□□ -1.07
PHC3-213ENST00000491258 CDK5R2Q13319 367 aa8.34□□□□□ -1.07
PHC3-213ENST00000491258 STK11IPQ8N1F8 1099 aa8.34□□□□□ -1.07
PHC3-213ENST00000491258 POU5F2Q8N7G0 328 aa8.34□□□□□ -1.07
PHC3-213ENST00000491258 WDR89Q96FK6 387 aaPredicted RBP8.34□□□□□ -1.07
PHC3-213ENST00000491258 C1orf115Q9H7X2 142 aa8.34□□□□□ -1.07
PHC3-213ENST00000491258 ABCB6Q9NP58 842 aa8.34□□□□□ -1.07
PHC3-213ENST00000491258 C8AP07357 584 aa8.33□□□□□ -1.08
PHC3-213ENST00000491258 FAM87AP0C7U9 286 aa8.33□□□□□ -1.08
PHC3-213ENST00000491258 PTPN12Q05209 780 aaKnown RBP8.33□□□□□ -1.08
PHC3-213ENST00000491258 CCDC74AQ96AQ1 378 aa8.33□□□□□ -1.08
PHC3-213ENST00000491258 FAM129BQ96TA1 746 aa8.33□□□□□ -1.08
PHC3-213ENST00000491258 ATXN3LQ9H3M9 355 aa8.33□□□□□ -1.08
PHC3-213ENST00000491258 CCDC86Q9H6F5 360 aaKnown RBP8.33□□□□□ -1.08
PHC3-213ENST00000491258 SYNGAP1Q96PV0 1343 aa8.32□□□□□ -1.08
PHC3-213ENST00000491258 SLFN14P0C7P3 912 aa8.32□□□□□ -1.08
PHC3-213ENST00000491258 ARHGAP4P98171 946 aa8.32□□□□□ -1.08
PHC3-213ENST00000491258 BNIP3Q12983 259 aa8.32□□□□□ -1.08
PHC3-213ENST00000491258 ECM1Q16610 540 aa8.32□□□□□ -1.08
PHC3-213ENST00000491258 ZNF792Q3KQV3 632 aa8.32□□□□□ -1.08
PHC3-213ENST00000491258 SPRED2Q7Z698 418 aa8.32□□□□□ -1.08
PHC3-213ENST00000491258 TMC1Q8TDI8 760 aa8.32□□□□□ -1.08
PHC3-213ENST00000491258 CRIM1Q9NZV1 1036 aa8.32□□□□□ -1.08
PHC3-213ENST00000491258 TMEM238LA0A1B0GVL6 79 aa8.31□□□□□ -1.08
PHC3-213ENST00000491258 PAPLNO95428 1278 aa8.31□□□□□ -1.08
PHC3-213ENST00000491258 ID3Q02535 119 aa8.31□□□□□ -1.08
PHC3-213ENST00000491258 FAAP100Q0VG06 881 aa8.31□□□□□ -1.08
PHC3-213ENST00000491258 RPS26P11Q5JNZ5 115 aaPredicted RBP8.31□□□□□ -1.08
PHC3-213ENST00000491258 PRPF40BQ6NWY9 871 aaKnown RBP8.31□□□□□ -1.08
PHC3-213ENST00000491258 WFDC3Q8IUB2 231 aa8.31□□□□□ -1.08
PHC3-213ENST00000491258 PLD6Q8N2A8 252 aaKnown RBP8.31□□□□□ -1.08
PHC3-213ENST00000491258 FAM181AQ8N9Y4 354 aa8.31□□□□□ -1.08
PHC3-213ENST00000491258 FANCD2OSQ96PS1 177 aa8.31□□□□□ -1.08
PHC3-213ENST00000491258 NIF3L1Q9GZT8 377 aa8.31□□□□□ -1.08
PHC3-213ENST00000491258 USTQ9Y2C2 406 aa8.31□□□□□ -1.08
PHC3-213ENST00000491258 EIF1AYO14602 144 aaKnown RBP8.3□□□□□ -1.08
PHC3-213ENST00000491258 ZNF862O60290 1169 aa8.3□□□□□ -1.08
PHC3-213ENST00000491258 RNGTTO60942 597 aaKnown RBP8.3□□□□□ -1.08
PHC3-213ENST00000491258 NETO1Q8TDF5 533 aa8.3□□□□□ -1.08
PHC3-213ENST00000491258 MISP3Q96FF7 219 aa8.3□□□□□ -1.08
PHC3-213ENST00000491258 TRAK1Q9UPV9 953 aa8.3□□□□□ -1.08
PHC3-213ENST00000491258 BIN1O00499 593 aa8.29□□□□□ -1.08
PHC3-213ENST00000491258 GPR182O15218 404 aa8.29□□□□□ -1.08
PHC3-213ENST00000491258 HNRNPUQ00839 825 aaKnown RBP eCLIP8.29□□□□□ -1.08
PHC3-213ENST00000491258 ARHGAP27Q6ZUM4 889 aa8.29□□□□□ -1.08
PHC3-213ENST00000491258 SMYD4Q8IYR2 804 aaPredicted RBP8.29□□□□□ -1.08
PHC3-213ENST00000491258 DNAJC25Q9H1X3 360 aa8.29□□□□□ -1.08
PHC3-213ENST00000491258 GTF3C3Q9Y5Q9 886 aa8.29□□□□□ -1.08
PHC3-213ENST00000491258 GSTP1P09211 210 aaKnown RBP8.28□□□□□ -1.08
PHC3-213ENST00000491258 GRM2Q14416 872 aa8.28□□□□□ -1.08
PHC3-213ENST00000491258 TTLL4Q14679 1199 aa8.28□□□□□ -1.08
PHC3-213ENST00000491258 CITED4Q96RK1 184 aa8.28□□□□□ -1.08
PHC3-213ENST00000491258 DISC1Q9NRI5 854 aa8.28□□□□□ -1.08
PHC3-213ENST00000491258 GPN3Q9UHW5 284 aaPredicted RBP8.28□□□□□ -1.08
PHC3-213ENST00000491258 CD8BP10966 210 aa8.27□□□□□ -1.09
PHC3-213ENST00000491258 HCLS1P14317 486 aaPredicted RBP8.27□□□□□ -1.09
PHC3-213ENST00000491258 KIF4BQ2VIQ3 1234 aa8.27□□□□□ -1.09
PHC3-213ENST00000491258 DTHD1Q6ZMT9 781 aa8.27□□□□□ -1.09
PHC3-213ENST00000491258 RC3H2Q9HBD1 1191 aaKnown RBP8.27□□□□□ -1.09
PHC3-213ENST00000491258 LEFTY1O75610 366 aa8.26□□□□□ -1.09
PHC3-213ENST00000491258 FUT4P22083 530 aa8.26□□□□□ -1.09
PHC3-213ENST00000491258 FCGRTP55899 365 aa8.26□□□□□ -1.09
PHC3-213ENST00000491258 ZNF648Q5T619 568 aaPredicted RBP8.26□□□□□ -1.09
PHC3-213ENST00000491258 GLIS3Q8NEA6 775 aa8.26□□□□□ -1.09
PHC3-213ENST00000491258 EPS8L3Q8TE67 593 aaKnown RBP8.26□□□□□ -1.09
PHC3-213ENST00000491258 KCNB2Q92953 911 aa8.26□□□□□ -1.09
PHC3-213ENST00000491258 KRT82Q9NSB4 513 aa8.26□□□□□ -1.09
PHC3-213ENST00000491258 U3KQE9 123 aa8.26□□□□□ -1.09
PHC3-213ENST00000491258 CD96P40200 585 aa8.25□□□□□ -1.09
PHC3-213ENST00000491258 PPP2R3AQ06190 1150 aa8.25□□□□□ -1.09
PHC3-213ENST00000491258 CSRNP1Q96S65 589 aa8.25□□□□□ -1.09
PHC3-213ENST00000491258 SSU72Q9NP77 194 aaKnown RBP8.25□□□□□ -1.09
PHC3-213ENST00000491258 PCOLCE2Q9UKZ9 415 aa8.25□□□□□ -1.09
PHC3-213ENST00000491258 PCDHGC5Q9Y5F6 944 aa8.25□□□□□ -1.09
PHC3-213ENST00000491258 CARMIL2Q6F5E8 1435 aa8.24□□□□□ -1.09
PHC3-213ENST00000491258 PRKCQQ04759 706 aa8.24□□□□□ -1.09
PHC3-213ENST00000491258 IFI16Q16666 785 aaKnown RBP8.24□□□□□ -1.09
PHC3-213ENST00000491258 TMEM39AQ9NV64 488 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms