RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 DCTN4Q9UJW0 460 aa3.14□□□□□ -1.91
SNRNP40-207ENST00000491106 TIMELESSQ9UNS1 1208 aa3.14□□□□□ -1.91
SNRNP40-207ENST00000491106 CSADQ9Y600 493 aa3.14□□□□□ -1.91
SNRNP40-207ENST00000491106 ACTL7BQ9Y614 415 aa3.14□□□□□ -1.91
SNRNP40-207ENST00000491106 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.13□□□□□ -1.91
SNRNP40-207ENST00000491106 PRR19A6NJB7 356 aa3.13□□□□□ -1.91
SNRNP40-207ENST00000491106 SOWAHDA6NJG2 315 aa3.13□□□□□ -1.91
SNRNP40-207ENST00000491106 BRD1O95696 1058 aa3.13□□□□□ -1.91
SNRNP40-207ENST00000491106 HCLS1P14317 486 aaPredicted RBP3.13□□□□□ -1.91
SNRNP40-207ENST00000491106 FOSL1P15407 271 aa3.13□□□□□ -1.91
SNRNP40-207ENST00000491106 HOXA10P31260 410 aaPredicted RBP3.13□□□□□ -1.91
SNRNP40-207ENST00000491106 ADMP35318 185 aa3.13□□□□□ -1.91
SNRNP40-207ENST00000491106 CD97P48960 835 aa3.13□□□□□ -1.91
SNRNP40-207ENST00000491106 ID3Q02535 119 aa3.13□□□□□ -1.91
SNRNP40-207ENST00000491106 GRM2Q14416 872 aa3.13□□□□□ -1.91
SNRNP40-207ENST00000491106 DIEXFQ68CQ4 756 aaKnown RBP3.13□□□□□ -1.91
SNRNP40-207ENST00000491106 PI16Q6UXB8 463 aa3.13□□□□□ -1.91
SNRNP40-207ENST00000491106 TPTE2Q6XPS3 522 aa3.13□□□□□ -1.91
SNRNP40-207ENST00000491106 TMC7Q7Z402 723 aa3.13□□□□□ -1.91
SNRNP40-207ENST00000491106 TXNDC2Q86VQ3 553 aa3.13□□□□□ -1.91
SNRNP40-207ENST00000491106 AEBP1Q8IUX7 1158 aa3.13□□□□□ -1.91
SNRNP40-207ENST00000491106 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.13□□□□□ -1.91
SNRNP40-207ENST00000491106 SMYD4Q8IYR2 804 aaPredicted RBP3.13□□□□□ -1.91
SNRNP40-207ENST00000491106 EMILIN2Q9BXX0 1053 aa3.13□□□□□ -1.91
SNRNP40-207ENST00000491106 ATXN3LQ9H3M9 355 aa3.13□□□□□ -1.91
SNRNP40-207ENST00000491106 ZNF576Q9H609 170 aa3.13□□□□□ -1.91
SNRNP40-207ENST00000491106 FAM105AQ9NUU6 356 aa3.13□□□□□ -1.91
SNRNP40-207ENST00000491106 RNF114Q9Y508 228 aa3.13□□□□□ -1.91
SNRNP40-207ENST00000491106 OAS3Q9Y6K5 1087 aaKnown RBP3.13□□□□□ -1.91
SNRNP40-207ENST00000491106 GPR182O15218 404 aa3.12□□□□□ -1.91
SNRNP40-207ENST00000491106 TIAF1O95411 115 aa3.12□□□□□ -1.91
SNRNP40-207ENST00000491106 B3GALT4O96024 378 aa3.12□□□□□ -1.91
SNRNP40-207ENST00000491106 GSTP1P09211 210 aaKnown RBP3.12□□□□□ -1.91
SNRNP40-207ENST00000491106 FAM87AP0C7U9 286 aa3.12□□□□□ -1.91
SNRNP40-207ENST00000491106 XRCC5P13010 732 aaKnown RBP3.12□□□□□ -1.91
SNRNP40-207ENST00000491106 CDK5R2Q13319 367 aa3.12□□□□□ -1.91
SNRNP40-207ENST00000491106 RPS26P11Q5JNZ5 115 aaPredicted RBP3.12□□□□□ -1.91
SNRNP40-207ENST00000491106 MCTP1Q6DN14 999 aa3.12□□□□□ -1.91
SNRNP40-207ENST00000491106 ZNF765Q7L2R6 523 aa3.12□□□□□ -1.91
SNRNP40-207ENST00000491106 ZAR1Q86SH2 424 aa3.12□□□□□ -1.91
SNRNP40-207ENST00000491106 SULF2Q8IWU5 870 aa3.12□□□□□ -1.91
SNRNP40-207ENST00000491106 SHISA5Q8N114 240 aa3.12□□□□□ -1.91
SNRNP40-207ENST00000491106 ELMO3Q96BJ8 720 aa3.12□□□□□ -1.91
SNRNP40-207ENST00000491106 FBXL18Q96ME1 805 aa3.12□□□□□ -1.91
SNRNP40-207ENST00000491106 SEMA6CQ9H3T2 930 aa3.12□□□□□ -1.91
SNRNP40-207ENST00000491106 CCDC86Q9H6F5 360 aaKnown RBP3.12□□□□□ -1.91
SNRNP40-207ENST00000491106 BSDC1Q9NW68 430 aaPredicted RBP3.12□□□□□ -1.91
SNRNP40-207ENST00000491106 PRKAG2Q9UGJ0 569 aa3.12□□□□□ -1.91
SNRNP40-207ENST00000491106 PCOLCE2Q9UKZ9 415 aa3.12□□□□□ -1.91
SNRNP40-207ENST00000491106 PPP1R9AQ9ULJ8 1098 aa3.12□□□□□ -1.91
SNRNP40-207ENST00000491106 DCDC2CA8MYV0 355 aa3.11□□□□□ -1.91
SNRNP40-207ENST00000491106 TM4SF5O14894 197 aa3.11□□□□□ -1.91
SNRNP40-207ENST00000491106 FBXO24O75426 580 aa3.11□□□□□ -1.91
SNRNP40-207ENST00000491106 CTSBP07858 339 aa3.11□□□□□ -1.91
SNRNP40-207ENST00000491106 ARNTP27540 789 aa3.11□□□□□ -1.91
SNRNP40-207ENST00000491106 GSTT1P30711 240 aa3.11□□□□□ -1.91
SNRNP40-207ENST00000491106 PTPN12Q05209 780 aaKnown RBP3.11□□□□□ -1.91
SNRNP40-207ENST00000491106 TTLL4Q14679 1199 aa3.11□□□□□ -1.91
SNRNP40-207ENST00000491106 PLCL1Q15111 1095 aa3.11□□□□□ -1.91
SNRNP40-207ENST00000491106 OGFOD3Q6PK18 319 aa3.11□□□□□ -1.91
SNRNP40-207ENST00000491106 PI4K2BQ8TCG2 481 aa3.11□□□□□ -1.91
SNRNP40-207ENST00000491106 WDR89Q96FK6 387 aaPredicted RBP3.11□□□□□ -1.91
SNRNP40-207ENST00000491106 FAM129BQ96TA1 746 aa3.11□□□□□ -1.91
SNRNP40-207ENST00000491106 WDR18Q9BV38 432 aa3.11□□□□□ -1.91
SNRNP40-207ENST00000491106 RBCK1Q9BYM8 510 aa3.11□□□□□ -1.91
SNRNP40-207ENST00000491106 CEP44Q9C0F1 390 aa3.11□□□□□ -1.91
SNRNP40-207ENST00000491106 PCDHA4Q9UN74 947 aa3.11□□□□□ -1.91
SNRNP40-207ENST00000491106 SPG7Q9UQ90 795 aa3.11□□□□□ -1.91
SNRNP40-207ENST00000491106 SLC5A6Q9Y289 635 aa3.11□□□□□ -1.91
SNRNP40-207ENST00000491106 IVNS1ABPQ9Y6Y0 642 aa3.11□□□□□ -1.91
SNRNP40-207ENST00000491106 BIN1O00499 593 aa3.1□□□□□ -1.91
SNRNP40-207ENST00000491106 DYNC1LI2O43237 492 aaPredicted RBP3.1□□□□□ -1.91
SNRNP40-207ENST00000491106 ITIH2P19823 946 aa3.1□□□□□ -1.91
SNRNP40-207ENST00000491106 NME2P22392 152 aa3.1□□□□□ -1.91
SNRNP40-207ENST00000491106 ITPKAP23677 461 aa3.1□□□□□ -1.91
SNRNP40-207ENST00000491106 FAAP100Q0VG06 881 aa3.1□□□□□ -1.91
SNRNP40-207ENST00000491106 BNIP3Q12983 259 aa3.1□□□□□ -1.91
SNRNP40-207ENST00000491106 LRRC14Q15048 493 aa3.1□□□□□ -1.91
SNRNP40-207ENST00000491106 ECM1Q16610 540 aa3.1□□□□□ -1.91
SNRNP40-207ENST00000491106 ALG1LQ6GMV1 187 aa3.1□□□□□ -1.91
SNRNP40-207ENST00000491106 C12orf40Q86WS4 652 aa3.1□□□□□ -1.91
SNRNP40-207ENST00000491106 DTX1Q86Y01 620 aa3.1□□□□□ -1.91
SNRNP40-207ENST00000491106 ABI1Q8IZP0 508 aa3.1□□□□□ -1.91
SNRNP40-207ENST00000491106 AGBL5Q8NDL9 886 aa3.1□□□□□ -1.91
SNRNP40-207ENST00000491106 FANCD2OSQ96PS1 177 aa3.1□□□□□ -1.91
SNRNP40-207ENST00000491106 TRIM56Q9BRZ2 755 aaKnown RBP3.1□□□□□ -1.91
SNRNP40-207ENST00000491106 ABCB6Q9NP58 842 aa3.1□□□□□ -1.91
SNRNP40-207ENST00000491106 CCDC39Q9UFE4 941 aa3.1□□□□□ -1.91
SNRNP40-207ENST00000491106 ZC3H7BQ9UGR2 993 aaKnown RBP3.1□□□□□ -1.91
SNRNP40-207ENST00000491106 TTF2Q9UNY4 1162 aaKnown RBP3.1□□□□□ -1.91
SNRNP40-207ENST00000491106 COL17A1Q9UMD9 1497 aaPredicted RBP3.09□□□□□ -1.91
SNRNP40-207ENST00000491106 PRAMEF27A3QJZ7 478 aa3.09□□□□□ -1.91
SNRNP40-207ENST00000491106 GNAT3A8MTJ3 354 aa3.09□□□□□ -1.91
SNRNP40-207ENST00000491106 ADAMTS4O75173 837 aa3.09□□□□□ -1.91
SNRNP40-207ENST00000491106 LDHBP07195 334 aaKnown RBP3.09□□□□□ -1.91
SNRNP40-207ENST00000491106 PDIA4P13667 645 aaKnown RBP3.09□□□□□ -1.91
SNRNP40-207ENST00000491106 CHMP4BP1P59074 171 aa3.09□□□□□ -1.91
SNRNP40-207ENST00000491106 CPSF6Q16630 551 aaKnown RBP eCLIP3.09□□□□□ -1.91
SNRNP40-207ENST00000491106 AOC3Q16853 763 aa3.09□□□□□ -1.91
SNRNP40-207ENST00000491106 VSIG10LQ86VR7 867 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms