RNA–Protein interactions for RNA: ENST00000490435.5

ITGA4-211, Transcript of integrin subunit alpha 4, humanhuman

TSL 5

Gene ITGA4, Length 720 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-211ENST00000490435 CCDC82Q8N4S0 544 aa8.88□□□□□ -0.99
ITGA4-211ENST00000490435 EGFL7Q9UHF1 273 aa8.88□□□□□ -0.99
ITGA4-211ENST00000490435 PLCL1Q15111 1095 aa8.87□□□□□ -0.99
ITGA4-211ENST00000490435 USPL1Q5W0Q7 1092 aa8.87□□□□□ -0.99
ITGA4-211ENST00000490435 MISP3Q96FF7 219 aa8.87□□□□□ -0.99
ITGA4-211ENST00000490435 WDR18Q9BV38 432 aa8.87□□□□□ -0.99
ITGA4-211ENST00000490435 KRTAP4-2Q9BYR5 136 aa8.87□□□□□ -0.99
ITGA4-211ENST00000490435 LGR6Q9HBX8 967 aa8.87□□□□□ -0.99
ITGA4-211ENST00000490435 BIN1O00499 593 aa8.86□□□□□ -0.99
ITGA4-211ENST00000490435 ICMTO60725 284 aa8.86□□□□□ -0.99
ITGA4-211ENST00000490435 PTPN12Q05209 780 aaKnown RBP8.86□□□□□ -0.99
ITGA4-211ENST00000490435 PPP1R9AQ9ULJ8 1098 aa8.86□□□□□ -0.99
ITGA4-211ENST00000490435 CPNE3O75131 537 aaKnown RBP8.85□□□□□ -0.99
ITGA4-211ENST00000490435 PAPLNO95428 1278 aa8.85□□□□□ -0.99
ITGA4-211ENST00000490435 PDE3BQ13370 1112 aa8.84□□□□□ -0.99
ITGA4-211ENST00000490435 ZNF792Q3KQV3 632 aa8.84□□□□□ -0.99
ITGA4-211ENST00000490435 ZNF574Q6ZN55 896 aaPredicted RBP8.84□□□□□ -0.99
ITGA4-211ENST00000490435 PIDD1Q9HB75 910 aa8.84□□□□□ -0.99
ITGA4-211ENST00000490435 NPHS2Q9NP85 383 aa8.84□□□□□ -0.99
ITGA4-211ENST00000490435 CARNS1A5YM72 827 aa8.83□□□□□ -1
ITGA4-211ENST00000490435 NDUFB5O43674 189 aa8.83□□□□□ -1
ITGA4-211ENST00000490435 SLFN14P0C7P3 912 aa8.83□□□□□ -1
ITGA4-211ENST00000490435 RPS26P11Q5JNZ5 115 aaPredicted RBP8.83□□□□□ -1
ITGA4-211ENST00000490435 SPRED2Q7Z698 418 aa8.83□□□□□ -1
ITGA4-211ENST00000490435 GLYCTKQ8IVS8 523 aa8.83□□□□□ -1
ITGA4-211ENST00000490435 CRIM1Q9NZV1 1036 aa8.83□□□□□ -1
ITGA4-211ENST00000490435 H3BRB1 525 aa8.82□□□□□ -1
ITGA4-211ENST00000490435 TMPRSS2O15393 492 aa8.82□□□□□ -1
ITGA4-211ENST00000490435 FAM87AP0C7U9 286 aa8.82□□□□□ -1
ITGA4-211ENST00000490435 HNRNPUQ00839 825 aaKnown RBP eCLIP8.82□□□□□ -1
ITGA4-211ENST00000490435 ORC1Q13415 861 aa8.82□□□□□ -1
ITGA4-211ENST00000490435 B4GALNT3Q6L9W6 998 aa8.82□□□□□ -1
ITGA4-211ENST00000490435 WFDC3Q8IUB2 231 aa8.82□□□□□ -1
ITGA4-211ENST00000490435 NETO1Q8TDF5 533 aa8.82□□□□□ -1
ITGA4-211ENST00000490435 ATXN3LQ9H3M9 355 aa8.82□□□□□ -1
ITGA4-211ENST00000490435 TUT1Q9H6E5 874 aaKnown RBP8.82□□□□□ -1
ITGA4-211ENST00000490435 ABCB6Q9NP58 842 aa8.82□□□□□ -1
ITGA4-211ENST00000490435 LIG1P18858 919 aa8.81□□□□□ -1
ITGA4-211ENST00000490435 CDK5R2Q13319 367 aa8.81□□□□□ -1
ITGA4-211ENST00000490435 PRPF40BQ6NWY9 871 aaKnown RBP8.81□□□□□ -1
ITGA4-211ENST00000490435 CCDC86Q9H6F5 360 aaKnown RBP8.81□□□□□ -1
ITGA4-211ENST00000490435 ID3Q02535 119 aa8.8□□□□□ -1
ITGA4-211ENST00000490435 BNIP3Q12983 259 aa8.8□□□□□ -1
ITGA4-211ENST00000490435 PLD6Q8N2A8 252 aaKnown RBP8.8□□□□□ -1
ITGA4-211ENST00000490435 FAM129BQ96TA1 746 aa8.8□□□□□ -1
ITGA4-211ENST00000490435 TMEM238LA0A1B0GVL6 79 aa8.79□□□□□ -1
ITGA4-211ENST00000490435 GADD45BO75293 160 aaPredicted RBP8.79□□□□□ -1
ITGA4-211ENST00000490435 FUT4P22083 530 aa8.79□□□□□ -1
ITGA4-211ENST00000490435 ECM1Q16610 540 aa8.79□□□□□ -1
ITGA4-211ENST00000490435 ATG4DQ86TL0 474 aaPredicted RBP8.79□□□□□ -1
ITGA4-211ENST00000490435 SMYD4Q8IYR2 804 aaPredicted RBP8.79□□□□□ -1
ITGA4-211ENST00000490435 FAM181AQ8N9Y4 354 aa8.79□□□□□ -1
ITGA4-211ENST00000490435 CCDC74AQ96AQ1 378 aa8.79□□□□□ -1
ITGA4-211ENST00000490435 WDR89Q96FK6 387 aaPredicted RBP8.79□□□□□ -1
ITGA4-211ENST00000490435 FANCD2OSQ96PS1 177 aa8.79□□□□□ -1
ITGA4-211ENST00000490435 CITED4Q96RK1 184 aa8.79□□□□□ -1
ITGA4-211ENST00000490435 DNAJC25Q9H1X3 360 aa8.79□□□□□ -1
ITGA4-211ENST00000490435 VAV3Q9UKW4 847 aa8.79□□□□□ -1
ITGA4-211ENST00000490435 TRAK1Q9UPV9 953 aa8.79□□□□□ -1
ITGA4-211ENST00000490435 ARHGAP4P98171 946 aa8.78□□□□□ -1
ITGA4-211ENST00000490435 ZC3H12CQ9C0D7 883 aaKnown RBP8.78□□□□□ -1
ITGA4-211ENST00000490435 KRT82Q9NSB4 513 aa8.78□□□□□ -1
ITGA4-211ENST00000490435 CD8BP10966 210 aa8.77□□□□□ -1.01
ITGA4-211ENST00000490435 SERPINB4P48594 390 aa8.77□□□□□ -1.01
ITGA4-211ENST00000490435 ZNF157P51786 506 aaPredicted RBP8.77□□□□□ -1.01
ITGA4-211ENST00000490435 PRKCQQ04759 706 aa8.77□□□□□ -1.01
ITGA4-211ENST00000490435 ZNF648Q5T619 568 aaPredicted RBP8.77□□□□□ -1.01
ITGA4-211ENST00000490435 RC3H2Q9HBD1 1191 aaKnown RBP8.77□□□□□ -1.01
ITGA4-211ENST00000490435 MKNK2Q9HBH9 465 aa8.77□□□□□ -1.01
ITGA4-211ENST00000490435 DISC1Q9NRI5 854 aa8.77□□□□□ -1.01
ITGA4-211ENST00000490435 USTQ9Y2C2 406 aa8.77□□□□□ -1.01
ITGA4-211ENST00000490435 EIF1AYO14602 144 aaKnown RBP8.76□□□□□ -1.01
ITGA4-211ENST00000490435 ZNF862O60290 1169 aa8.76□□□□□ -1.01
ITGA4-211ENST00000490435 GSTP1P09211 210 aaKnown RBP8.76□□□□□ -1.01
ITGA4-211ENST00000490435 FAAP100Q0VG06 881 aa8.76□□□□□ -1.01
ITGA4-211ENST00000490435 IFI16Q16666 785 aaKnown RBP8.76□□□□□ -1.01
ITGA4-211ENST00000490435 KIF4BQ2VIQ3 1234 aa8.76□□□□□ -1.01
ITGA4-211ENST00000490435 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.76□□□□□ -1.01
ITGA4-211ENST00000490435 CARMIL2Q6F5E8 1435 aa8.76□□□□□ -1.01
ITGA4-211ENST00000490435 RNGTTO60942 597 aaKnown RBP8.75□□□□□ -1.01
ITGA4-211ENST00000490435 PPP2R3AQ06190 1150 aa8.75□□□□□ -1.01
ITGA4-211ENST00000490435 ARHGAP27Q6ZUM4 889 aa8.75□□□□□ -1.01
ITGA4-211ENST00000490435 GLIS3Q8NEA6 775 aa8.75□□□□□ -1.01
ITGA4-211ENST00000490435 PI4K2BQ8TCG2 481 aa8.75□□□□□ -1.01
ITGA4-211ENST00000490435 TMC1Q8TDI8 760 aa8.75□□□□□ -1.01
ITGA4-211ENST00000490435 MBNL3Q9NUK0 354 aaKnown RBP8.75□□□□□ -1.01
ITGA4-211ENST00000490435 PCOLCE2Q9UKZ9 415 aa8.75□□□□□ -1.01
ITGA4-211ENST00000490435 PCDHGC5Q9Y5F6 944 aa8.75□□□□□ -1.01
ITGA4-211ENST00000490435 FARP2O94887 1054 aaPredicted RBP8.74□□□□□ -1.01
ITGA4-211ENST00000490435 RNASE1P07998 156 aaKnown RBP8.74□□□□□ -1.01
ITGA4-211ENST00000490435 GRM2Q14416 872 aa8.74□□□□□ -1.01
ITGA4-211ENST00000490435 TTLL4Q14679 1199 aa8.74□□□□□ -1.01
ITGA4-211ENST00000490435 FAM168AQ92567 244 aa8.74□□□□□ -1.01
ITGA4-211ENST00000490435 NIF3L1Q9GZT8 377 aa8.74□□□□□ -1.01
ITGA4-211ENST00000490435 TMEM265A0A087WTH1 108 aa8.73□□□□□ -1.01
ITGA4-211ENST00000490435 HCLS1P14317 486 aaPredicted RBP8.73□□□□□ -1.01
ITGA4-211ENST00000490435 AOC3Q16853 763 aa8.73□□□□□ -1.01
ITGA4-211ENST00000490435 DTHD1Q6ZMT9 781 aa8.73□□□□□ -1.01
ITGA4-211ENST00000490435 HRASLS5Q96KN8 279 aa8.73□□□□□ -1.01
ITGA4-211ENST00000490435 DUSP23Q9BVJ7 150 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms