RNA–Protein interactions for RNA: ENST00000490175.5

SNX5-214, Transcript of sorting nexin 5, humanhuman

TSL 1 (best)

Gene SNX5, Length 2,025 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-214ENST00000490175 RCOR1Q9UKL0 485 aa18.81■□□□□ 0.6
SNX5-214ENST00000490175 CACNA1SQ13698 1873 aa18.8■□□□□ 0.6
SNX5-214ENST00000490175 CPLX2Q6PUV4 134 aaKnown RBP18.8■□□□□ 0.6
SNX5-214ENST00000490175 APOA5Q6Q788 366 aa18.8■□□□□ 0.6
SNX5-214ENST00000490175 MFSD6Q6ZSS7 791 aa18.8■□□□□ 0.6
SNX5-214ENST00000490175 RNF214Q8ND24 703 aa18.8■□□□□ 0.6
SNX5-214ENST00000490175 CERKQ8TCT0 537 aa18.8■□□□□ 0.6
SNX5-214ENST00000490175 C8orf76Q96K31 380 aa18.8■□□□□ 0.6
SNX5-214ENST00000490175 NUP62CLQ9H1M0 184 aa18.8■□□□□ 0.6
SNX5-214ENST00000490175 RNF41Q9H4P4 317 aaPredicted RBP18.8■□□□□ 0.6
SNX5-214ENST00000490175 RAI14Q9P0K7 980 aa18.8■□□□□ 0.6
SNX5-214ENST00000490175 ABCF2Q9UG63 623 aa18.8■□□□□ 0.6
SNX5-214ENST00000490175 MYH13Q9UKX3 1938 aa18.8■□□□□ 0.6
SNX5-214ENST00000490175 MAGEB6P1A0A0J9YX57 407 aa18.79■□□□□ 0.6
SNX5-214ENST00000490175 PRKCSHP14314 528 aaPredicted RBP18.79■□□□□ 0.6
SNX5-214ENST00000490175 METAP2P50579 478 aaKnown RBP eCLIP18.79■□□□□ 0.6
SNX5-214ENST00000490175 SEPT12Q8IYM1 358 aa18.79■□□□□ 0.6
SNX5-214ENST00000490175 IQSEC3Q9UPP2 1182 aaPredicted RBP18.79■□□□□ 0.6
SNX5-214ENST00000490175 PRKAB2O43741 272 aa18.79■□□□□ 0.6
SNX5-214ENST00000490175 LIG1P18858 919 aa18.79■□□□□ 0.6
SNX5-214ENST00000490175 AMIGO3Q86WK7 504 aa18.79■□□□□ 0.6
SNX5-214ENST00000490175 FBXO18Q8NFZ0 1043 aa18.79■□□□□ 0.6
SNX5-214ENST00000490175 PGBD1Q96JS3 809 aa18.79■□□□□ 0.6
SNX5-214ENST00000490175 LY9Q9HBG7 655 aa18.79■□□□□ 0.6
SNX5-214ENST00000490175 TM4SF1P30408 202 aa18.78■□□□□ 0.6
SNX5-214ENST00000490175 CTDSPL2Q05D32 466 aa18.78■□□□□ 0.6
SNX5-214ENST00000490175 TMEM67Q5HYA8 995 aa18.78■□□□□ 0.6
SNX5-214ENST00000490175 GIMAP6Q6P9H5 292 aa18.78■□□□□ 0.6
SNX5-214ENST00000490175 MIGA1Q8NAN2 632 aa18.78■□□□□ 0.6
SNX5-214ENST00000490175 ZBTB43O43298 467 aa18.78■□□□□ 0.6
SNX5-214ENST00000490175 CCDC192P0DO97 292 aa18.78■□□□□ 0.6
SNX5-214ENST00000490175 FOSBP53539 338 aa18.78■□□□□ 0.6
SNX5-214ENST00000490175 SART3Q15020 963 aaKnown RBP18.78■□□□□ 0.6
SNX5-214ENST00000490175 MAP3K11Q16584 847 aa18.78■□□□□ 0.6
SNX5-214ENST00000490175 BRAPQ7Z569 592 aa18.78■□□□□ 0.6
SNX5-214ENST00000490175 ZSWIM5Q9P217 1185 aa18.78■□□□□ 0.6
SNX5-214ENST00000490175 ANAPC4Q9UJX5 808 aa18.78■□□□□ 0.6
SNX5-214ENST00000490175 NID2Q14112 1375 aa18.77■□□□□ 0.6
SNX5-214ENST00000490175 IGSF3O75054 1194 aa18.77■□□□□ 0.6
SNX5-214ENST00000490175 KDM4AO75164 1064 aa18.77■□□□□ 0.6
SNX5-214ENST00000490175 HIBADHP31937 336 aaKnown RBP18.77■□□□□ 0.6
SNX5-214ENST00000490175 NFXL1Q6ZNB6 911 aa18.77■□□□□ 0.6
SNX5-214ENST00000490175 FAM196AQ6ZSG2 479 aa18.77■□□□□ 0.6
SNX5-214ENST00000490175 NKX2-3Q8TAU0 364 aa18.77■□□□□ 0.6
SNX5-214ENST00000490175 BICD2Q8TD16 824 aa18.77■□□□□ 0.6
SNX5-214ENST00000490175 RIOK1Q9BRS2 568 aaKnown RBP18.77■□□□□ 0.6
SNX5-214ENST00000490175 DACT1Q9NYF0 836 aa18.77■□□□□ 0.6
SNX5-214ENST00000490175 TNRC6CQ9HCJ0 1690 aaKnown RBP18.76■□□□□ 0.59
SNX5-214ENST00000490175 WTIPA6NIX2 430 aaPredicted RBP18.76■□□□□ 0.59
SNX5-214ENST00000490175 IFIT3O14879 490 aaKnown RBP18.76■□□□□ 0.59
SNX5-214ENST00000490175 HSPA1LP34931 641 aa18.76■□□□□ 0.59
SNX5-214ENST00000490175 ADGRA1Q86SQ6 560 aa18.76■□□□□ 0.59
SNX5-214ENST00000490175 CLSTN2Q9H4D0 955 aa18.76■□□□□ 0.59
SNX5-214ENST00000490175 NPHP1O15259 732 aa18.76■□□□□ 0.59
SNX5-214ENST00000490175 GUCY1B3Q02153 619 aa18.76■□□□□ 0.59
SNX5-214ENST00000490175 PPARAQ07869 468 aa18.76■□□□□ 0.59
SNX5-214ENST00000490175 RBM43Q6ZSC3 357 aaKnown RBP18.76■□□□□ 0.59
SNX5-214ENST00000490175 ILDR1Q86SU0 546 aaPredicted RBP18.76■□□□□ 0.59
SNX5-214ENST00000490175 TMTC2Q8N394 836 aa18.76■□□□□ 0.59
SNX5-214ENST00000490175 USP28Q96RU2 1077 aa18.76■□□□□ 0.59
SNX5-214ENST00000490175 BRIP1Q9BX63 1249 aa18.76■□□□□ 0.59
SNX5-214ENST00000490175 TNMDQ9H2S6 317 aa18.76■□□□□ 0.59
SNX5-214ENST00000490175 MAST2Q6P0Q8 1798 aa18.75■□□□□ 0.59
SNX5-214ENST00000490175 CCDC69A6NI79 296 aa18.75■□□□□ 0.59
SNX5-214ENST00000490175 RCAN1P53805 252 aa18.75■□□□□ 0.59
SNX5-214ENST00000490175 SYNE3Q6ZMZ3 975 aa18.75■□□□□ 0.59
SNX5-214ENST00000490175 RTEL1Q9NZ71 1219 aa18.75■□□□□ 0.59
SNX5-214ENST00000490175 SLC12A7Q9Y666 1083 aa18.75■□□□□ 0.59
SNX5-214ENST00000490175 TACC3Q9Y6A5 838 aa18.75■□□□□ 0.59
SNX5-214ENST00000490175 UBR3Q6ZT12 1888 aa18.75■□□□□ 0.59
SNX5-214ENST00000490175 PPFIA3O75145 1194 aa18.74■□□□□ 0.59
SNX5-214ENST00000490175 NFIXQ14938 502 aa18.74■□□□□ 0.59
SNX5-214ENST00000490175 ZSCAN30Q86W11 494 aa18.74■□□□□ 0.59
SNX5-214ENST00000490175 RAB11FIP4Q86YS3 637 aa18.74■□□□□ 0.59
SNX5-214ENST00000490175 STK36Q9NRP7 1315 aa18.74■□□□□ 0.59
SNX5-214ENST00000490175 GOLGA8AA7E2F4 631 aa18.74■□□□□ 0.59
SNX5-214ENST00000490175 PCP11498 1178 aaKnown RBP18.74■□□□□ 0.59
SNX5-214ENST00000490175 AEBP2Q6ZN18 517 aaPredicted RBP18.74■□□□□ 0.59
SNX5-214ENST00000490175 MICU3Q86XE3 530 aa18.74■□□□□ 0.59
SNX5-214ENST00000490175 CNBD1Q8NA66 436 aa18.74■□□□□ 0.59
SNX5-214ENST00000490175 INCENPQ9NQS7 918 aa18.74■□□□□ 0.59
SNX5-214ENST00000490175 ERICH2A1L162 156 aa18.73■□□□□ 0.59
SNX5-214ENST00000490175 GRAPQ13588 217 aa18.73■□□□□ 0.59
SNX5-214ENST00000490175 NTRK3Q16288 839 aa18.73■□□□□ 0.59
SNX5-214ENST00000490175 SLC27A3Q5K4L6 730 aa18.73■□□□□ 0.59
SNX5-214ENST00000490175 GRAPLQ8TC17 118 aaPredicted RBP18.73■□□□□ 0.59
SNX5-214ENST00000490175 SENP2Q9HC62 589 aa18.73■□□□□ 0.59
SNX5-214ENST00000490175 LRRC4BQ9NT99 713 aa18.73■□□□□ 0.59
SNX5-214ENST00000490175 IRS2Q9Y4H2 1338 aa18.73■□□□□ 0.59
SNX5-214ENST00000490175 CCDC88AQ3V6T2 1871 aa18.73■□□□□ 0.59
SNX5-214ENST00000490175 NR1I2O75469 434 aa18.73■□□□□ 0.59
SNX5-214ENST00000490175 HMGB2P26583 209 aaKnown RBP18.73■□□□□ 0.59
SNX5-214ENST00000490175 KLRK1P26718 216 aa18.73■□□□□ 0.59
SNX5-214ENST00000490175 CDC27P30260 824 aa18.73■□□□□ 0.59
SNX5-214ENST00000490175 CEBPZQ03701 1054 aaKnown RBP18.73■□□□□ 0.59
SNX5-214ENST00000490175 WTAPQ15007 396 aa18.73■□□□□ 0.59
SNX5-214ENST00000490175 NSUN4Q96CB9 384 aaKnown RBP18.73■□□□□ 0.59
SNX5-214ENST00000490175 LEMD3Q9Y2U8 911 aa18.73■□□□□ 0.59
SNX5-214ENST00000490175 YEATS4O95619 227 aa18.72■□□□□ 0.59
SNX5-214ENST00000490175 IARSP41252 1262 aaKnown RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms