RNA–Protein interactions for RNA: ENST00000489994.5

IFRD1-215, Transcript of interferon related developmental regulator 1, humanhuman

TSL 1 (best)

Gene IFRD1, Length 1,721 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1-215ENST00000489994 ERCC4Q92889 916 aaPredicted RBP6.6□□□□□ -1.35
IFRD1-215ENST00000489994 SCYL1Q96KG9 808 aa6.6□□□□□ -1.35
IFRD1-215ENST00000489994 MKNK1Q9BUB5 465 aa6.6□□□□□ -1.35
IFRD1-215ENST00000489994 C22orf23Q9BZE7 217 aa6.6□□□□□ -1.35
IFRD1-215ENST00000489994 OSBPL3Q9H4L5 887 aa6.6□□□□□ -1.35
IFRD1-215ENST00000489994 MED4Q9NPJ6 270 aa6.6□□□□□ -1.35
IFRD1-215ENST00000489994 CGNQ9P2M7 1197 aaKnown RBP6.6□□□□□ -1.35
IFRD1-215ENST00000489994 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.6□□□□□ -1.35
IFRD1-215ENST00000489994 C1orf167Q5SNV9 1468 aa6.59□□□□□ -1.35
IFRD1-215ENST00000489994 PTCH1Q13635 1447 aa6.59□□□□□ -1.35
IFRD1-215ENST00000489994 METP08581 1390 aa6.59□□□□□ -1.35
IFRD1-215ENST00000489994 SOBPA7XYQ1 873 aa6.59□□□□□ -1.35
IFRD1-215ENST00000489994 LGR5O75473 907 aa6.59□□□□□ -1.35
IFRD1-215ENST00000489994 GNRH1P01148 92 aa6.59□□□□□ -1.35
IFRD1-215ENST00000489994 CTSOP43234 321 aaPredicted RBP6.59□□□□□ -1.35
IFRD1-215ENST00000489994 FKBP4Q02790 459 aaKnown RBP eCLIP6.59□□□□□ -1.35
IFRD1-215ENST00000489994 KLHL10Q6JEL2 608 aa6.59□□□□□ -1.35
IFRD1-215ENST00000489994 FBXO33Q7Z6M2 555 aa6.59□□□□□ -1.35
IFRD1-215ENST00000489994 NPAS3Q8IXF0 933 aa6.59□□□□□ -1.35
IFRD1-215ENST00000489994 JMYQ8N9B5 988 aa6.59□□□□□ -1.35
IFRD1-215ENST00000489994 NLRP3Q96P20 1036 aa6.59□□□□□ -1.35
IFRD1-215ENST00000489994 CXorf56Q9H5V9 222 aa6.59□□□□□ -1.35
IFRD1-215ENST00000489994 BRMS1Q9HCU9 246 aa6.59□□□□□ -1.35
IFRD1-215ENST00000489994 NXF1Q9UBU9 619 aaKnown RBP6.59□□□□□ -1.35
IFRD1-215ENST00000489994 SUN2Q9UH99 717 aa6.59□□□□□ -1.35
IFRD1-215ENST00000489994 DNMT3LQ9UJW3 386 aa6.59□□□□□ -1.35
IFRD1-215ENST00000489994 USP21Q9UK80 565 aa6.59□□□□□ -1.35
IFRD1-215ENST00000489994 PAXBP1Q9Y5B6 917 aa6.59□□□□□ -1.35
IFRD1-215ENST00000489994 GLI3P10071 1580 aa6.59□□□□□ -1.35
IFRD1-215ENST00000489994 BCL9LQ86UU0 1499 aa6.59□□□□□ -1.35
IFRD1-215ENST00000489994 A0A1W2PRU2 124 aa6.59□□□□□ -1.36
IFRD1-215ENST00000489994 FIGNL2A6NMB9 653 aa6.59□□□□□ -1.36
IFRD1-215ENST00000489994 MEN1O00255 615 aa6.59□□□□□ -1.36
IFRD1-215ENST00000489994 SETSIPP0DME0 302 aa6.59□□□□□ -1.36
IFRD1-215ENST00000489994 EAPPQ56P03 285 aaPredicted RBP6.59□□□□□ -1.36
IFRD1-215ENST00000489994 LRCH2Q5VUJ6 765 aa6.59□□□□□ -1.36
IFRD1-215ENST00000489994 ANKRD13BQ86YJ7 626 aa6.59□□□□□ -1.36
IFRD1-215ENST00000489994 PDILTQ8N807 584 aa6.59□□□□□ -1.36
IFRD1-215ENST00000489994 SLC16A10Q8TF71 515 aa6.59□□□□□ -1.36
IFRD1-215ENST00000489994 INO80BQ9C086 356 aaPredicted RBP6.59□□□□□ -1.36
IFRD1-215ENST00000489994 SEPT3Q9UH03 358 aa6.59□□□□□ -1.36
IFRD1-215ENST00000489994 TRPC5Q9UL62 973 aaPredicted RBP6.59□□□□□ -1.36
IFRD1-215ENST00000489994 RGPD8O14715 1765 aaPredicted RBP6.58□□□□□ -1.36
IFRD1-215ENST00000489994 MYOM2P54296 1465 aa6.58□□□□□ -1.36
IFRD1-215ENST00000489994 CCDC189A1A4V9 331 aa6.58□□□□□ -1.36
IFRD1-215ENST00000489994 CCDC66A2RUB6 948 aa6.58□□□□□ -1.36
IFRD1-215ENST00000489994 TERTO14746 1132 aaKnown RBP6.58□□□□□ -1.36
IFRD1-215ENST00000489994 PTCD1O75127 700 aaKnown RBP6.58□□□□□ -1.36
IFRD1-215ENST00000489994 GPC1P35052 558 aa6.58□□□□□ -1.36
IFRD1-215ENST00000489994 ZC3H6P61129 1189 aaKnown RBP6.58□□□□□ -1.36
IFRD1-215ENST00000489994 TAGLNQ01995 201 aaKnown RBP6.58□□□□□ -1.36
IFRD1-215ENST00000489994 IFT88Q13099 833 aa6.58□□□□□ -1.36
IFRD1-215ENST00000489994 HSCBQ8IWL3 235 aa6.58□□□□□ -1.36
IFRD1-215ENST00000489994 PAGR1Q9BTK6 254 aa6.58□□□□□ -1.36
IFRD1-215ENST00000489994 MAP3K20Q9NYL2 800 aaKnown RBP6.58□□□□□ -1.36
IFRD1-215ENST00000489994 ISY1Q9ULR0 285 aaKnown RBP6.58□□□□□ -1.36
IFRD1-215ENST00000489994 DNMT3AQ9Y6K1 912 aaPredicted RBP6.58□□□□□ -1.36
IFRD1-215ENST00000489994 SBNO2Q9Y2G9 1366 aa6.57□□□□□ -1.36
IFRD1-215ENST00000489994 CCP110O43303 1012 aa6.57□□□□□ -1.36
IFRD1-215ENST00000489994 CAPN2P17655 700 aa6.57□□□□□ -1.36
IFRD1-215ENST00000489994 RNF144AP50876 292 aaPredicted RBP6.57□□□□□ -1.36
IFRD1-215ENST00000489994 PSMD2Q13200 908 aa6.57□□□□□ -1.36
IFRD1-215ENST00000489994 CLN3Q13286 438 aa6.57□□□□□ -1.36
IFRD1-215ENST00000489994 TSNAXIP1Q2TAA8 658 aa6.57□□□□□ -1.36
IFRD1-215ENST00000489994 C11orf91Q3C1V1 193 aa6.57□□□□□ -1.36
IFRD1-215ENST00000489994 ESCO1Q5FWF5 840 aa6.57□□□□□ -1.36
IFRD1-215ENST00000489994 MFSD4BQ5TF39 518 aa6.57□□□□□ -1.36
IFRD1-215ENST00000489994 CHCHD3Q9NX63 227 aaKnown RBP6.57□□□□□ -1.36
IFRD1-215ENST00000489994 CHPF2Q9P2E5 772 aa6.57□□□□□ -1.36
IFRD1-215ENST00000489994 PCDHGA11Q9Y5H2 935 aa6.57□□□□□ -1.36
IFRD1-215ENST00000489994 NEXMIFQ5QGS0 1516 aa6.57□□□□□ -1.36
IFRD1-215ENST00000489994 CLTCL1P53675 1640 aa6.56□□□□□ -1.36
IFRD1-215ENST00000489994 hCG_2014768A0A024R1R8 64 aa6.56□□□□□ -1.36
IFRD1-215ENST00000489994 GTF2A1P52655 376 aaPredicted RBP6.56□□□□□ -1.36
IFRD1-215ENST00000489994 IGBP1P78318 339 aa6.56□□□□□ -1.36
IFRD1-215ENST00000489994 MTMR3Q13615 1198 aa6.56□□□□□ -1.36
IFRD1-215ENST00000489994 COL19A1Q14993 1142 aa6.56□□□□□ -1.36
IFRD1-215ENST00000489994 TREML4Q6UXN2 200 aa6.56□□□□□ -1.36
IFRD1-215ENST00000489994 LYSMD3Q7Z3D4 306 aa6.56□□□□□ -1.36
IFRD1-215ENST00000489994 CCAR1Q8IX12 1150 aaKnown RBP6.56□□□□□ -1.36
IFRD1-215ENST00000489994 KLHL23Q8NBE8 558 aa6.56□□□□□ -1.36
IFRD1-215ENST00000489994 ORAI2Q96SN7 254 aa6.56□□□□□ -1.36
IFRD1-215ENST00000489994 RETREG1Q9H6L5 497 aa6.56□□□□□ -1.36
IFRD1-215ENST00000489994 PXDNQ92626 1479 aa6.56□□□□□ -1.36
IFRD1-215ENST00000489994 PLCH1Q4KWH8 1693 aa6.56□□□□□ -1.36
IFRD1-215ENST00000489994 PPLO60437 1756 aa6.56□□□□□ -1.36
IFRD1-215ENST00000489994 TULP2O00295 520 aa6.56□□□□□ -1.36
IFRD1-215ENST00000489994 KIF5CO60282 957 aa6.56□□□□□ -1.36
IFRD1-215ENST00000489994 WFS1O76024 890 aa6.56□□□□□ -1.36
IFRD1-215ENST00000489994 RECKO95980 971 aa6.56□□□□□ -1.36
IFRD1-215ENST00000489994 KCNA2P16389 499 aa6.56□□□□□ -1.36
IFRD1-215ENST00000489994 KCNJ4P48050 445 aa6.56□□□□□ -1.36
IFRD1-215ENST00000489994 EIF5P55010 431 aaKnown RBP6.56□□□□□ -1.36
IFRD1-215ENST00000489994 BIRC2Q13490 618 aa6.56□□□□□ -1.36
IFRD1-215ENST00000489994 SLC27A3Q5K4L6 730 aa6.56□□□□□ -1.36
IFRD1-215ENST00000489994 C16orf87Q6PH81 154 aa6.56□□□□□ -1.36
IFRD1-215ENST00000489994 CCDC146Q8IYE0 955 aa6.56□□□□□ -1.36
IFRD1-215ENST00000489994 VPS37AQ8NEZ2 397 aa6.56□□□□□ -1.36
IFRD1-215ENST00000489994 ENOX1Q8TC92 643 aaKnown RBP6.56□□□□□ -1.36
IFRD1-215ENST00000489994 FRAT1Q92837 279 aaPredicted RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms