RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 GNL3LQ9NVN8 582 aaKnown RBP24.12■■□□□ 1.45
TNFRSF1B-202ENST00000489921 TMOD2Q9NZR1 351 aa24.12■■□□□ 1.45
TNFRSF1B-202ENST00000489921 DENND2AQ9ULE3 1009 aa24.12■■□□□ 1.45
TNFRSF1B-202ENST00000489921 SNCAIPQ9Y6H5 919 aa24.12■■□□□ 1.45
TNFRSF1B-202ENST00000489921 LDHBP07195 334 aaKnown RBP24.11■■□□□ 1.45
TNFRSF1B-202ENST00000489921 TFCP2Q12800 502 aa24.11■■□□□ 1.45
TNFRSF1B-202ENST00000489921 NFIAQ12857 509 aa24.11■■□□□ 1.45
TNFRSF1B-202ENST00000489921 ZKSCAN4Q969J2 545 aaPredicted RBP24.11■■□□□ 1.45
TNFRSF1B-202ENST00000489921 CLUAP1Q96AJ1 413 aa24.11■■□□□ 1.45
TNFRSF1B-202ENST00000489921 A0A1B0GUL7 405 aa24.1■■□□□ 1.45
TNFRSF1B-202ENST00000489921 CAP1Q01518 475 aa24.1■■□□□ 1.45
TNFRSF1B-202ENST00000489921 RASGRF1Q13972 1273 aa24.1■■□□□ 1.45
TNFRSF1B-202ENST00000489921 FBXO46Q6PJ61 603 aaPredicted RBP24.1■■□□□ 1.45
TNFRSF1B-202ENST00000489921 FAM151AQ8WW52 585 aa24.1■■□□□ 1.45
TNFRSF1B-202ENST00000489921 FAM198AQ9UFP1 575 aa24.1■■□□□ 1.45
TNFRSF1B-202ENST00000489921 BRCA2P51587 3418 aa24.09■■□□□ 1.45
TNFRSF1B-202ENST00000489921 PNMA6EA0A0J9YXQ4 647 aa24.09■■□□□ 1.45
TNFRSF1B-202ENST00000489921 SPDYE5A6NIY4 337 aa24.09■■□□□ 1.45
TNFRSF1B-202ENST00000489921 OTUD5Q96G74 571 aa24.09■■□□□ 1.45
TNFRSF1B-202ENST00000489921 XAGE2Q96GT9 111 aa24.09■■□□□ 1.45
TNFRSF1B-202ENST00000489921 WRNIP1Q96S55 665 aa24.09■■□□□ 1.45
TNFRSF1B-202ENST00000489921 CSADQ9Y600 493 aa24.09■■□□□ 1.45
TNFRSF1B-202ENST00000489921 GNAI2P04899 355 aa24.08■■□□□ 1.45
TNFRSF1B-202ENST00000489921 OTUD7BQ6GQQ9 843 aa24.08■■□□□ 1.45
TNFRSF1B-202ENST00000489921 MIGA2Q7L4E1 593 aa24.08■■□□□ 1.45
TNFRSF1B-202ENST00000489921 ZFPM1Q8IX07 1006 aa24.08■■□□□ 1.45
TNFRSF1B-202ENST00000489921 AK9Q5TCS8 1911 aa24.08■■□□□ 1.44
TNFRSF1B-202ENST00000489921 PDS5AQ29RF7 1337 aaKnown RBP24.08■■□□□ 1.44
TNFRSF1B-202ENST00000489921 GTF2A2P52657 109 aa24.07■■□□□ 1.44
TNFRSF1B-202ENST00000489921 OTOP1Q7RTM1 612 aa24.07■■□□□ 1.44
TNFRSF1B-202ENST00000489921 TMEM57Q8N5G2 664 aa24.07■■□□□ 1.44
TNFRSF1B-202ENST00000489921 USP40Q9NVE5 1235 aa24.07■■□□□ 1.44
TNFRSF1B-202ENST00000489921 ZNF112Q9UJU3 913 aa24.07■■□□□ 1.44
TNFRSF1B-202ENST00000489921 CCL15-CCL14A0A0B4J2E2 113 aa24.06■■□□□ 1.44
TNFRSF1B-202ENST00000489921 TCP10Q12799 353 aa24.06■■□□□ 1.44
TNFRSF1B-202ENST00000489921 CCL15Q16663 113 aa24.06■■□□□ 1.44
TNFRSF1B-202ENST00000489921 ERO1BQ86YB8 467 aa24.06■■□□□ 1.44
TNFRSF1B-202ENST00000489921 FAM43AQ8N2R8 423 aa24.06■■□□□ 1.44
TNFRSF1B-202ENST00000489921 AKAP2Q9Y2D5 859 aa24.06■■□□□ 1.44
TNFRSF1B-202ENST00000489921 GAKO14976 1311 aa24.06■■□□□ 1.44
TNFRSF1B-202ENST00000489921 INPP5BP32019 993 aa24.05■■□□□ 1.44
TNFRSF1B-202ENST00000489921 HNRNPUQ00839 825 aaKnown RBP eCLIP24.05■■□□□ 1.44
TNFRSF1B-202ENST00000489921 ZNF384Q8TF68 577 aa24.05■■□□□ 1.44
TNFRSF1B-202ENST00000489921 HOOK2Q96ED9 719 aa24.05■■□□□ 1.44
TNFRSF1B-202ENST00000489921 MKI67P46013 3256 aaKnown RBP24.05■■□□□ 1.44
TNFRSF1B-202ENST00000489921 RFX7Q2KHR2 1363 aa24.04■■□□□ 1.44
TNFRSF1B-202ENST00000489921 IRF6O14896 467 aa24.04■■□□□ 1.44
TNFRSF1B-202ENST00000489921 ZKSCAN2Q63HK3 967 aa24.04■■□□□ 1.44
TNFRSF1B-202ENST00000489921 DCAF15Q66K64 600 aa24.04■■□□□ 1.44
TNFRSF1B-202ENST00000489921 CD99L2Q8TCZ2 262 aa24.04■■□□□ 1.44
TNFRSF1B-202ENST00000489921 FAM163AQ96GL9 167 aaPredicted RBP24.04■■□□□ 1.44
TNFRSF1B-202ENST00000489921 ZNF341Q9BYN7 854 aa24.04■■□□□ 1.44
TNFRSF1B-202ENST00000489921 TRIM17Q9Y577 477 aa24.04■■□□□ 1.44
TNFRSF1B-202ENST00000489921 ATRNL1Q5VV63 1379 aa24.03■■□□□ 1.44
TNFRSF1B-202ENST00000489921 DIEXFQ68CQ4 756 aaKnown RBP24.03■■□□□ 1.44
TNFRSF1B-202ENST00000489921 ZGPATQ8N5A5 531 aaKnown RBP24.03■■□□□ 1.44
TNFRSF1B-202ENST00000489921 IDI2Q9BXS1 227 aa24.03■■□□□ 1.44
TNFRSF1B-202ENST00000489921 SP3Q02447 781 aa24.02■■□□□ 1.44
TNFRSF1B-202ENST00000489921 PPIL2Q13356 520 aa24.02■■□□□ 1.44
TNFRSF1B-202ENST00000489921 POLA2Q14181 598 aa24.02■■□□□ 1.44
TNFRSF1B-202ENST00000489921 MVPQ14764 893 aaKnown RBP24.02■■□□□ 1.44
TNFRSF1B-202ENST00000489921 SH3BP5LQ7L8J4 393 aa24.02■■□□□ 1.44
TNFRSF1B-202ENST00000489921 ERO1AQ96HE7 468 aa24.02■■□□□ 1.44
TNFRSF1B-202ENST00000489921 NEUROD6Q96NK8 337 aa24.02■■□□□ 1.44
TNFRSF1B-202ENST00000489921 HMG20BQ9P0W2 317 aa24.02■■□□□ 1.44
TNFRSF1B-202ENST00000489921 ABCF2Q9UG63 623 aa24.02■■□□□ 1.44
TNFRSF1B-202ENST00000489921 DOCK2Q92608 1830 aa24.02■■□□□ 1.44
TNFRSF1B-202ENST00000489921 BTBD19C9JJ37 291 aa24.01■■□□□ 1.43
TNFRSF1B-202ENST00000489921 PI16Q6UXB8 463 aa24.01■■□□□ 1.43
TNFRSF1B-202ENST00000489921 CETPP11597 493 aa24■■□□□ 1.43
TNFRSF1B-202ENST00000489921 RLBP1P12271 317 aa24■■□□□ 1.43
TNFRSF1B-202ENST00000489921 RGS3P49796 1198 aa24■■□□□ 1.43
TNFRSF1B-202ENST00000489921 PPATQ06203 517 aa24■■□□□ 1.43
TNFRSF1B-202ENST00000489921 TAF1CQ15572 869 aaPredicted RBP24■■□□□ 1.43
TNFRSF1B-202ENST00000489921 DDX4Q9NQI0 724 aaKnown RBP24■■□□□ 1.43
TNFRSF1B-202ENST00000489921 PTPN22Q9Y2R2 807 aa24■■□□□ 1.43
TNFRSF1B-202ENST00000489921 PDE4DIPQ5VU43 2346 aa23.99■■□□□ 1.43
TNFRSF1B-202ENST00000489921 ZSWIM8A7E2V4 1837 aa23.99■■□□□ 1.43
TNFRSF1B-202ENST00000489921 PHF20L1A8MW92 1017 aa23.99■■□□□ 1.43
TNFRSF1B-202ENST00000489921 WDHD1O75717 1129 aaPredicted RBP23.99■■□□□ 1.43
TNFRSF1B-202ENST00000489921 ARID4AP29374 1257 aaPredicted RBP23.99■■□□□ 1.43
TNFRSF1B-202ENST00000489921 MECOMQ03112 1051 aa23.99■■□□□ 1.43
TNFRSF1B-202ENST00000489921 SNAPC2Q13487 334 aa23.99■■□□□ 1.43
TNFRSF1B-202ENST00000489921 DZIP1Q86YF9 867 aaKnown RBP23.99■■□□□ 1.43
TNFRSF1B-202ENST00000489921 SSH3Q8TE77 659 aa23.99■■□□□ 1.43
TNFRSF1B-202ENST00000489921 ZFYVE28Q9HCC9 887 aa23.99■■□□□ 1.43
TNFRSF1B-202ENST00000489921 ENTPD3O75355 529 aa23.98■■□□□ 1.43
TNFRSF1B-202ENST00000489921 SLURP2P0DP57 97 aa23.98■■□□□ 1.43
TNFRSF1B-202ENST00000489921 RHBDL3P58872 404 aa23.98■■□□□ 1.43
TNFRSF1B-202ENST00000489921 ATP8B2P98198 1209 aa23.98■■□□□ 1.43
TNFRSF1B-202ENST00000489921 MAP3K10Q02779 954 aa23.98■■□□□ 1.43
TNFRSF1B-202ENST00000489921 G3BP1Q13283 466 aaKnown RBP eCLIP23.98■■□□□ 1.43
TNFRSF1B-202ENST00000489921 MOGSQ13724 837 aa23.98■■□□□ 1.43
TNFRSF1B-202ENST00000489921 NOL9Q5SY16 702 aaKnown RBP23.98■■□□□ 1.43
TNFRSF1B-202ENST00000489921 SPTY2D1Q68D10 685 aaPredicted RBP23.98■■□□□ 1.43
TNFRSF1B-202ENST00000489921 EFCC1Q9HA90 598 aa23.98■■□□□ 1.43
TNFRSF1B-202ENST00000489921 KCNH4Q9UQ05 1017 aa23.98■■□□□ 1.43
TNFRSF1B-202ENST00000489921 MROH7-TTC4A0A0A0MT08 1334 aa23.98■■□□□ 1.43
TNFRSF1B-202ENST00000489921 GPR75-ASB3A0A0A6YYF3 556 aa23.97■■□□□ 1.43
TNFRSF1B-202ENST00000489921 ZBTB7BO15156 539 aaPredicted RBP23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms