RNA–Protein interactions for RNA: ENST00000489676.1

TFF3-203, Transcript of trefoil factor 3, humanhuman

TSL 2

Gene TFF3, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-203ENST00000489676 OGFOD1Q8N543 542 aa13.14□□□□□ -0.31
TFF3-203ENST00000489676 MIGA1Q8NAN2 632 aa13.14□□□□□ -0.31
TFF3-203ENST00000489676 TRPM4Q8TD43 1214 aa13.14□□□□□ -0.31
TFF3-203ENST00000489676 HELLSQ9NRZ9 838 aa13.14□□□□□ -0.31
TFF3-203ENST00000489676 NAV1Q8NEY1 1877 aa13.14□□□□□ -0.31
TFF3-203ENST00000489676 FOXP2O15409 715 aa13.13□□□□□ -0.31
TFF3-203ENST00000489676 SGSM2O43147 1006 aa13.13□□□□□ -0.31
TFF3-203ENST00000489676 GPAA1O43292 621 aa13.13□□□□□ -0.31
TFF3-203ENST00000489676 MBD4O95243 580 aa13.13□□□□□ -0.31
TFF3-203ENST00000489676 HSPA6P17066 643 aa13.13□□□□□ -0.31
TFF3-203ENST00000489676 BTDP43251 543 aa13.13□□□□□ -0.31
TFF3-203ENST00000489676 DYNLL1P63167 89 aaKnown RBP13.13□□□□□ -0.31
TFF3-203ENST00000489676 KIF4BQ2VIQ3 1234 aa13.13□□□□□ -0.31
TFF3-203ENST00000489676 CWC27Q6UX04 472 aaKnown RBP13.13□□□□□ -0.31
TFF3-203ENST00000489676 SAMD7Q7Z3H4 446 aa13.13□□□□□ -0.31
TFF3-203ENST00000489676 LCORLQ8N3X6 602 aa13.13□□□□□ -0.31
TFF3-203ENST00000489676 ESYT1Q9BSJ8 1104 aa13.13□□□□□ -0.31
TFF3-203ENST00000489676 GPBP1L1Q9HC44 474 aaPredicted RBP13.13□□□□□ -0.31
TFF3-203ENST00000489676 AATFQ9NY61 560 aaKnown RBP eCLIP13.13□□□□□ -0.31
TFF3-203ENST00000489676 MAGEB6P1A0A0J9YX57 407 aa13.12□□□□□ -0.31
TFF3-203ENST00000489676 WNT10BO00744 389 aa13.12□□□□□ -0.31
TFF3-203ENST00000489676 LMOD1P29536 600 aaPredicted RBP13.12□□□□□ -0.31
TFF3-203ENST00000489676 DLGAP5Q15398 846 aa13.12□□□□□ -0.31
TFF3-203ENST00000489676 MCMDC2Q4G0Z9 681 aa13.12□□□□□ -0.31
TFF3-203ENST00000489676 CDC42EP5Q6NZY7 148 aa13.12□□□□□ -0.31
TFF3-203ENST00000489676 CCDC129Q6ZRS4 1044 aa13.12□□□□□ -0.31
TFF3-203ENST00000489676 CERS3Q8IU89 383 aa13.12□□□□□ -0.31
TFF3-203ENST00000489676 PRMT6Q96LA8 375 aaPredicted RBP13.12□□□□□ -0.31
TFF3-203ENST00000489676 ARMT1Q9H993 441 aa13.12□□□□□ -0.31
TFF3-203ENST00000489676 ADARB2Q9NS39 739 aaKnown RBP13.12□□□□□ -0.31
TFF3-203ENST00000489676 HACL1Q9UJ83 578 aa13.12□□□□□ -0.31
TFF3-203ENST00000489676 CCDC171Q6TFL3 1326 aa13.12□□□□□ -0.31
TFF3-203ENST00000489676 LAMA4Q16363 1823 aa13.11□□□□□ -0.31
TFF3-203ENST00000489676 H7C1D1 291 aa13.11□□□□□ -0.31
TFF3-203ENST00000489676 HIRAP54198 1017 aaPredicted RBP13.11□□□□□ -0.31
TFF3-203ENST00000489676 NBPF9Q3BBW0 867 aa13.11□□□□□ -0.31
TFF3-203ENST00000489676 SPDYE2Q495Y8 402 aa13.11□□□□□ -0.31
TFF3-203ENST00000489676 TBC1D10BQ4KMP7 808 aaPredicted RBP13.11□□□□□ -0.31
TFF3-203ENST00000489676 SH3RF3Q8TEJ3 882 aaPredicted RBP13.11□□□□□ -0.31
TFF3-203ENST00000489676 STRBPQ96SI9 672 aaKnown RBP13.11□□□□□ -0.31
TFF3-203ENST00000489676 TAF1DQ9H5J8 278 aaPredicted RBP13.11□□□□□ -0.31
TFF3-203ENST00000489676 LAMB1P07942 1786 aa13.11□□□□□ -0.31
TFF3-203ENST00000489676 ASTN2O75129 1339 aaPredicted RBP13.11□□□□□ -0.31
TFF3-203ENST00000489676 COL2A1P02458 1487 aaPredicted RBP13.1□□□□□ -0.31
TFF3-203ENST00000489676 IQCA1LA6NCM1 817 aa13.1□□□□□ -0.31
TFF3-203ENST00000489676 WDHD1O75717 1129 aaPredicted RBP13.1□□□□□ -0.31
TFF3-203ENST00000489676 BAG3O95817 575 aa13.1□□□□□ -0.31
TFF3-203ENST00000489676 EPHX2P34913 555 aa13.1□□□□□ -0.31
TFF3-203ENST00000489676 RBM5P52756 815 aaKnown RBP eCLIP13.1□□□□□ -0.31
TFF3-203ENST00000489676 VPS53Q5VIR6 699 aa13.1□□□□□ -0.31
TFF3-203ENST00000489676 RUFY2Q8WXA3 655 aa13.1□□□□□ -0.31
TFF3-203ENST00000489676 AIDAQ96BJ3 306 aa13.1□□□□□ -0.31
TFF3-203ENST00000489676 IDI2Q9BXS1 227 aa13.1□□□□□ -0.31
TFF3-203ENST00000489676 TDRD3Q9H7E2 651 aaKnown RBP13.1□□□□□ -0.31
TFF3-203ENST00000489676 EPB41L4AQ9HCS5 686 aaPredicted RBP13.1□□□□□ -0.31
TFF3-203ENST00000489676 MKRN1Q9UHC7 482 aaKnown RBP13.1□□□□□ -0.31
TFF3-203ENST00000489676 SIPA1L1O43166 1804 aa13.1□□□□□ -0.31
TFF3-203ENST00000489676 BAZ2AQ9UIF9 1905 aaKnown RBP13.09□□□□□ -0.31
TFF3-203ENST00000489676 CNTNAP1P78357 1384 aa13.09□□□□□ -0.31
TFF3-203ENST00000489676 PRKAB2O43741 272 aa13.09□□□□□ -0.31
TFF3-203ENST00000489676 NPM3O75607 178 aaKnown RBP13.09□□□□□ -0.31
TFF3-203ENST00000489676 PLCG2P16885 1265 aa13.09□□□□□ -0.31
TFF3-203ENST00000489676 NFIAQ12857 509 aa13.09□□□□□ -0.31
TFF3-203ENST00000489676 USP50Q70EL3 339 aaPredicted RBP13.09□□□□□ -0.31
TFF3-203ENST00000489676 NMRK2Q9NPI5 230 aa13.09□□□□□ -0.31
TFF3-203ENST00000489676 DDX4Q9NQI0 724 aaKnown RBP13.09□□□□□ -0.31
TFF3-203ENST00000489676 ZNF70Q9UC06 446 aaPredicted RBP13.09□□□□□ -0.31
TFF3-203ENST00000489676 ZMYM6O95789 1325 aa13.09□□□□□ -0.31
TFF3-203ENST00000489676 FLT1P17948 1338 aa13.09□□□□□ -0.31
TFF3-203ENST00000489676 RPAP1Q9BWH6 1393 aaPredicted RBP13.08□□□□□ -0.31
TFF3-203ENST00000489676 GSG1L2A8MUP6 293 aa13.08□□□□□ -0.32
TFF3-203ENST00000489676 RBM26Q5T8P6 1007 aaKnown RBP13.08□□□□□ -0.32
TFF3-203ENST00000489676 FKBP1CQ5VVH2 108 aa13.08□□□□□ -0.32
TFF3-203ENST00000489676 CASC1Q6TDU7 716 aa13.08□□□□□ -0.32
TFF3-203ENST00000489676 TEX11Q8IYF3 940 aa13.08□□□□□ -0.32
TFF3-203ENST00000489676 NOL10Q9BSC4 688 aaKnown RBP13.08□□□□□ -0.32
TFF3-203ENST00000489676 CRNKL1Q9BZJ0 848 aaKnown RBP13.08□□□□□ -0.32
TFF3-203ENST00000489676 LSG1Q9H089 658 aaKnown RBP13.08□□□□□ -0.32
TFF3-203ENST00000489676 USP40Q9NVE5 1235 aa13.08□□□□□ -0.32
TFF3-203ENST00000489676 GGA3Q9NZ52 723 aa13.08□□□□□ -0.32
TFF3-203ENST00000489676 FAM198AQ9UFP1 575 aa13.08□□□□□ -0.32
TFF3-203ENST00000489676 PITPNM2Q9BZ72 1349 aa13.08□□□□□ -0.32
TFF3-203ENST00000489676 MYH1P12882 1939 aa13.07□□□□□ -0.32
TFF3-203ENST00000489676 ATRNL1Q5VV63 1379 aa13.07□□□□□ -0.32
TFF3-203ENST00000489676 CLRN2A0PK11 232 aa13.07□□□□□ -0.32
TFF3-203ENST00000489676 HSPD1P10809 573 aaKnown RBP13.07□□□□□ -0.32
TFF3-203ENST00000489676 VEGFAP15692 232 aaPredicted RBP13.07□□□□□ -0.32
TFF3-203ENST00000489676 GNAT2P19087 354 aa13.07□□□□□ -0.32
TFF3-203ENST00000489676 CACNB3P54284 484 aa13.07□□□□□ -0.32
TFF3-203ENST00000489676 MFAP1P55081 439 aaKnown RBP13.07□□□□□ -0.32
TFF3-203ENST00000489676 ZNF526Q8TF50 670 aaPredicted RBP13.07□□□□□ -0.32
TFF3-203ENST00000489676 SDR42E1Q8WUS8 393 aa13.07□□□□□ -0.32
TFF3-203ENST00000489676 DSCC1Q9BVC3 393 aa13.07□□□□□ -0.32
TFF3-203ENST00000489676 DCP1AQ9NPI6 582 aaPredicted RBP13.07□□□□□ -0.32
TFF3-203ENST00000489676 PGAP2Q9UHJ9 254 aa13.07□□□□□ -0.32
TFF3-203ENST00000489676 MYO1BO43795 1136 aa13.06□□□□□ -0.32
TFF3-203ENST00000489676 PTH1RQ03431 593 aa13.06□□□□□ -0.32
TFF3-203ENST00000489676 GIMAP6Q6P9H5 292 aa13.06□□□□□ -0.32
TFF3-203ENST00000489676 ZC3H15Q8WU90 426 aaKnown RBP13.06□□□□□ -0.32
TFF3-203ENST00000489676 TGFBRAP1Q8WUH2 860 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms