RNA–Protein interactions for RNA: ENST00000489261.1

ITSN1-231, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 1,108 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-231ENST00000489261 RAI14Q9P0K7 980 aa12.74□□□□□ -0.37
ITSN1-231ENST00000489261 SBF1O95248 1867 aa12.74□□□□□ -0.37
ITSN1-231ENST00000489261 A0A0G2JLW4 131 aa12.73□□□□□ -0.37
ITSN1-231ENST00000489261 MAGEB6P1A0A0J9YX57 407 aa12.73□□□□□ -0.37
ITSN1-231ENST00000489261 GSG1L2A8MUP6 293 aa12.73□□□□□ -0.37
ITSN1-231ENST00000489261 H3BQV1 296 aa12.73□□□□□ -0.37
ITSN1-231ENST00000489261 SERPINB2P05120 415 aa12.73□□□□□ -0.37
ITSN1-231ENST00000489261 DPEP1P16444 411 aa12.73□□□□□ -0.37
ITSN1-231ENST00000489261 KCNA3P22001 575 aa12.73□□□□□ -0.37
ITSN1-231ENST00000489261 HAND2P61296 217 aa12.73□□□□□ -0.37
ITSN1-231ENST00000489261 COL9A3Q14050 684 aaPredicted RBP12.73□□□□□ -0.37
ITSN1-231ENST00000489261 IFFO2Q5TF58 517 aa12.73□□□□□ -0.37
ITSN1-231ENST00000489261 ZNF784Q8NCA9 323 aaPredicted RBP12.73□□□□□ -0.37
ITSN1-231ENST00000489261 NSUN7Q8NE18 718 aaKnown RBP12.73□□□□□ -0.37
ITSN1-231ENST00000489261 GPT2Q8TD30 523 aa12.73□□□□□ -0.37
ITSN1-231ENST00000489261 RPGRQ92834 1020 aaKnown RBP12.73□□□□□ -0.37
ITSN1-231ENST00000489261 SLC4A4Q9Y6R1 1079 aa12.73□□□□□ -0.37
ITSN1-231ENST00000489261 DOCK2Q92608 1830 aa12.73□□□□□ -0.37
ITSN1-231ENST00000489261 CACNA1SQ13698 1873 aa12.72□□□□□ -0.37
ITSN1-231ENST00000489261 ELP1O95163 1332 aa12.72□□□□□ -0.37
ITSN1-231ENST00000489261 KLRG2A4D1S0 409 aaPredicted RBP12.72□□□□□ -0.37
ITSN1-231ENST00000489261 ATP2B4P23634 1241 aa12.72□□□□□ -0.37
ITSN1-231ENST00000489261 HOXA10P31260 410 aaPredicted RBP12.72□□□□□ -0.37
ITSN1-231ENST00000489261 LIFRP42702 1097 aa12.72□□□□□ -0.37
ITSN1-231ENST00000489261 CRY2Q49AN0 593 aa12.72□□□□□ -0.37
ITSN1-231ENST00000489261 AKNAD1Q5T1N1 836 aa12.72□□□□□ -0.37
ITSN1-231ENST00000489261 PRR5LQ6MZQ0 368 aa12.72□□□□□ -0.37
ITSN1-231ENST00000489261 CAVIN1Q6NZI2 390 aaKnown RBP12.72□□□□□ -0.37
ITSN1-231ENST00000489261 CPLX2Q6PUV4 134 aaKnown RBP12.72□□□□□ -0.37
ITSN1-231ENST00000489261 MFSD6Q6ZSS7 791 aa12.72□□□□□ -0.37
ITSN1-231ENST00000489261 WDR66Q8TBY9 1149 aa12.72□□□□□ -0.37
ITSN1-231ENST00000489261 STAG1Q8WVM7 1258 aa12.72□□□□□ -0.37
ITSN1-231ENST00000489261 CRAMP1Q96RY5 1269 aa12.72□□□□□ -0.37
ITSN1-231ENST00000489261 BRIP1Q9BX63 1249 aa12.72□□□□□ -0.37
ITSN1-231ENST00000489261 LRRC2Q9BYS8 371 aa12.72□□□□□ -0.37
ITSN1-231ENST00000489261 ARMT1Q9H993 441 aa12.72□□□□□ -0.37
ITSN1-231ENST00000489261 GRPEL1Q9HAV7 217 aa12.72□□□□□ -0.37
ITSN1-231ENST00000489261 ABCF2Q9UG63 623 aa12.72□□□□□ -0.37
ITSN1-231ENST00000489261 ANAPC4Q9UJX5 808 aa12.72□□□□□ -0.37
ITSN1-231ENST00000489261 ANGEL1Q9UNK9 670 aaKnown RBP12.72□□□□□ -0.37
ITSN1-231ENST00000489261 XDHP47989 1333 aa12.71□□□□□ -0.37
ITSN1-231ENST00000489261 SALL1Q9NSC2 1324 aa12.71□□□□□ -0.37
ITSN1-231ENST00000489261 CDKL5O76039 1030 aa12.71□□□□□ -0.37
ITSN1-231ENST00000489261 TDO2P48775 406 aa12.71□□□□□ -0.37
ITSN1-231ENST00000489261 SART3Q15020 963 aaKnown RBP12.71□□□□□ -0.37
ITSN1-231ENST00000489261 ZSCAN23Q3MJ62 389 aa12.71□□□□□ -0.37
ITSN1-231ENST00000489261 SGMS1Q86VZ5 419 aa12.71□□□□□ -0.37
ITSN1-231ENST00000489261 CERS3Q8IU89 383 aa12.71□□□□□ -0.37
ITSN1-231ENST00000489261 CFAP45Q9UL16 551 aa12.71□□□□□ -0.37
ITSN1-231ENST00000489261 KLF18A0A0U1RQI7 1052 aa12.7□□□□□ -0.38
ITSN1-231ENST00000489261 PTPDC1A2A3K4 754 aa12.7□□□□□ -0.38
ITSN1-231ENST00000489261 SH2B2O14492 632 aaPredicted RBP12.7□□□□□ -0.38
ITSN1-231ENST00000489261 XRCC6P12956 609 aaKnown RBP eCLIP12.7□□□□□ -0.38
ITSN1-231ENST00000489261 RCAN1P53805 252 aa12.7□□□□□ -0.38
ITSN1-231ENST00000489261 ANTXR2P58335 489 aa12.7□□□□□ -0.38
ITSN1-231ENST00000489261 GSTO1P78417 241 aa12.7□□□□□ -0.38
ITSN1-231ENST00000489261 PPP2R5BQ15173 497 aa12.7□□□□□ -0.38
ITSN1-231ENST00000489261 SYNE3Q6ZMZ3 975 aa12.7□□□□□ -0.38
ITSN1-231ENST00000489261 ZNF804AQ7Z570 1209 aa12.7□□□□□ -0.38
ITSN1-231ENST00000489261 LCORLQ8N3X6 602 aa12.7□□□□□ -0.38
ITSN1-231ENST00000489261 ANKIB1Q9P2G1 1089 aa12.7□□□□□ -0.38
ITSN1-231ENST00000489261 CNPY2Q9Y2B0 182 aa12.7□□□□□ -0.38
ITSN1-231ENST00000489261 CCDC88AQ3V6T2 1871 aa12.7□□□□□ -0.38
ITSN1-231ENST00000489261 LAMA4Q16363 1823 aa12.69□□□□□ -0.38
ITSN1-231ENST00000489261 IRS2Q9Y4H2 1338 aa12.69□□□□□ -0.38
ITSN1-231ENST00000489261 CPLX1O14810 134 aa12.69□□□□□ -0.38
ITSN1-231ENST00000489261 JAK2O60674 1132 aa12.69□□□□□ -0.38
ITSN1-231ENST00000489261 CTDNEP1O95476 244 aa12.69□□□□□ -0.38
ITSN1-231ENST00000489261 LDHCP07864 332 aa12.69□□□□□ -0.38
ITSN1-231ENST00000489261 CCT2P78371 535 aaKnown RBP12.69□□□□□ -0.38
ITSN1-231ENST00000489261 DNM1Q05193 864 aaKnown RBP12.69□□□□□ -0.38
ITSN1-231ENST00000489261 LRSAM1Q6UWE0 723 aa12.69□□□□□ -0.38
ITSN1-231ENST00000489261 CDC37L1Q7L3B6 337 aa12.69□□□□□ -0.38
ITSN1-231ENST00000489261 TBC1D10CQ8IV04 446 aa12.69□□□□□ -0.38
ITSN1-231ENST00000489261 TDRD7Q8NHU6 1098 aaKnown RBP12.69□□□□□ -0.38
ITSN1-231ENST00000489261 IGDCC4Q8TDY8 1250 aa12.69□□□□□ -0.38
ITSN1-231ENST00000489261 NSUN4Q96CB9 384 aaKnown RBP12.69□□□□□ -0.38
ITSN1-231ENST00000489261 ZNF396Q96N95 335 aaPredicted RBP12.69□□□□□ -0.38
ITSN1-231ENST00000489261 RIOK1Q9BRS2 568 aaKnown RBP12.69□□□□□ -0.38
ITSN1-231ENST00000489261 NBPF3Q9H094 633 aa12.69□□□□□ -0.38
ITSN1-231ENST00000489261 EPB41L4AQ9HCS5 686 aaPredicted RBP12.69□□□□□ -0.38
ITSN1-231ENST00000489261 ATP8A2Q9NTI2 1148 aa12.69□□□□□ -0.38
ITSN1-231ENST00000489261 PODXL2Q9NZ53 605 aa12.69□□□□□ -0.38
ITSN1-231ENST00000489261 NAP1L2Q9ULW6 460 aaPredicted RBP12.69□□□□□ -0.38
ITSN1-231ENST00000489261 BCS1LQ9Y276 419 aa12.69□□□□□ -0.38
ITSN1-231ENST00000489261 ERICH2A1L162 156 aa12.68□□□□□ -0.38
ITSN1-231ENST00000489261 SLC3A2P08195 630 aaKnown RBP12.68□□□□□ -0.38
ITSN1-231ENST00000489261 CHRNA5P30532 468 aa12.68□□□□□ -0.38
ITSN1-231ENST00000489261 PPARAQ07869 468 aa12.68□□□□□ -0.38
ITSN1-231ENST00000489261 RESTQ13127 1097 aa12.68□□□□□ -0.38
ITSN1-231ENST00000489261 CCDC183Q5T5S1 534 aa12.68□□□□□ -0.38
ITSN1-231ENST00000489261 CHST3Q7LGC8 479 aa12.68□□□□□ -0.38
ITSN1-231ENST00000489261 ANP32BQ92688 251 aaKnown RBP12.68□□□□□ -0.38
ITSN1-231ENST00000489261 CRNKL1Q9BZJ0 848 aaKnown RBP12.68□□□□□ -0.38
ITSN1-231ENST00000489261 TMEM63CQ9P1W3 806 aa12.68□□□□□ -0.38
ITSN1-231ENST00000489261 PIM2Q9P1W9 311 aa12.68□□□□□ -0.38
ITSN1-231ENST00000489261 BRPF3Q9ULD4 1205 aa12.68□□□□□ -0.38
ITSN1-231ENST00000489261 A0A1B0GUL6 1792 aa12.68□□□□□ -0.38
ITSN1-231ENST00000489261 FER1L6Q2WGJ9 1857 aa12.68□□□□□ -0.38
ITSN1-231ENST00000489261 CCDC196A0A1B0GTZ2 297 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms