RNA–Protein interactions for RNA: ENST00000489158.1

EXOSC1-211, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 2,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-211ENST00000489158 U2AF2P26368 475 aaKnown RBP eCLIP10.57□□□□□ -0.72
EXOSC1-211ENST00000489158 HIBADHP31937 336 aaKnown RBP10.57□□□□□ -0.72
EXOSC1-211ENST00000489158 GPSM2P81274 684 aa10.57□□□□□ -0.72
EXOSC1-211ENST00000489158 WASHC4Q2M389 1173 aa10.57□□□□□ -0.72
EXOSC1-211ENST00000489158 GRIPAP1Q4V328 841 aa10.57□□□□□ -0.72
EXOSC1-211ENST00000489158 CC2D2BQ6DHV5 1058 aa10.57□□□□□ -0.72
EXOSC1-211ENST00000489158 CCDC83Q8IWF9 413 aa10.57□□□□□ -0.72
EXOSC1-211ENST00000489158 ANKRD7Q92527 254 aa10.57□□□□□ -0.72
EXOSC1-211ENST00000489158 SEC62Q99442 399 aaKnown RBP10.57□□□□□ -0.72
EXOSC1-211ENST00000489158 MTMR6Q9Y217 621 aa10.57□□□□□ -0.72
EXOSC1-211ENST00000489158 MYO5AQ9Y4I1 1855 aaKnown RBP10.56□□□□□ -0.72
EXOSC1-211ENST00000489158 CASTP20810 708 aaKnown RBP10.56□□□□□ -0.72
EXOSC1-211ENST00000489158 KLRK1P26718 216 aa10.56□□□□□ -0.72
EXOSC1-211ENST00000489158 SLFNL1Q499Z3 407 aa10.56□□□□□ -0.72
EXOSC1-211ENST00000489158 MCMDC2Q4G0Z9 681 aa10.56□□□□□ -0.72
EXOSC1-211ENST00000489158 ZMYM1Q5SVZ6 1142 aa10.56□□□□□ -0.72
EXOSC1-211ENST00000489158 ZNF804AQ7Z570 1209 aa10.56□□□□□ -0.72
EXOSC1-211ENST00000489158 KIAA1551Q9HCM1 1747 aa10.56□□□□□ -0.72
EXOSC1-211ENST00000489158 CCDC171Q6TFL3 1326 aa10.55□□□□□ -0.72
EXOSC1-211ENST00000489158 CTIFO43310 598 aaKnown RBP10.55□□□□□ -0.72
EXOSC1-211ENST00000489158 UFL1O94874 794 aa10.55□□□□□ -0.72
EXOSC1-211ENST00000489158 CCDC192P0DO97 292 aa10.55□□□□□ -0.72
EXOSC1-211ENST00000489158 PTGS1P23219 599 aa10.55□□□□□ -0.72
EXOSC1-211ENST00000489158 MAP3K12Q12852 859 aa10.55□□□□□ -0.72
EXOSC1-211ENST00000489158 UBE3CQ15386 1083 aa10.55□□□□□ -0.72
EXOSC1-211ENST00000489158 CCDC129Q6ZRS4 1044 aa10.55□□□□□ -0.72
EXOSC1-211ENST00000489158 ZNF589Q86UQ0 364 aaPredicted RBP10.55□□□□□ -0.72
EXOSC1-211ENST00000489158 APPBP2Q92624 585 aa10.55□□□□□ -0.72
EXOSC1-211ENST00000489158 PTH1RQ03431 593 aa10.55□□□□□ -0.72
EXOSC1-211ENST00000489158 KLHL34Q8N239 644 aa10.55□□□□□ -0.72
EXOSC1-211ENST00000489158 TBC1D16Q8TBP0 767 aa10.55□□□□□ -0.72
EXOSC1-211ENST00000489158 PIH1D3Q9NQM4 214 aaKnown RBP10.55□□□□□ -0.72
EXOSC1-211ENST00000489158 ABCF2Q9UG63 623 aa10.55□□□□□ -0.72
EXOSC1-211ENST00000489158 CCDC88AQ3V6T2 1871 aa10.55□□□□□ -0.72
EXOSC1-211ENST00000489158 SLX4Q8IY92 1834 aa10.54□□□□□ -0.72
EXOSC1-211ENST00000489158 VPS37CA5D8V6 355 aaPredicted RBP10.54□□□□□ -0.72
EXOSC1-211ENST00000489158 ZBTB7AO95365 584 aa10.54□□□□□ -0.72
EXOSC1-211ENST00000489158 ADD2P35612 726 aa10.54□□□□□ -0.72
EXOSC1-211ENST00000489158 TGFB2P61812 414 aa10.54□□□□□ -0.72
EXOSC1-211ENST00000489158 R3HDM1Q15032 1099 aaKnown RBP10.54□□□□□ -0.72
EXOSC1-211ENST00000489158 SLC9C2Q5TAH2 1124 aa10.54□□□□□ -0.72
EXOSC1-211ENST00000489158 TXNRD3Q86VQ6 643 aa10.54□□□□□ -0.72
EXOSC1-211ENST00000489158 GPR101Q96P66 508 aaPredicted RBP10.54□□□□□ -0.72
EXOSC1-211ENST00000489158 PDRG1Q9NUG6 133 aa10.54□□□□□ -0.72
EXOSC1-211ENST00000489158 LRP2BPQ9P2M1 347 aa10.54□□□□□ -0.72
EXOSC1-211ENST00000489158 COL1A1P02452 1464 aaPredicted RBP10.54□□□□□ -0.72
EXOSC1-211ENST00000489158 SALL1Q9NSC2 1324 aa10.54□□□□□ -0.72
EXOSC1-211ENST00000489158 C6orf229H3BNL8 230 aa10.54□□□□□ -0.72
EXOSC1-211ENST00000489158 CHRNA5P30532 468 aa10.54□□□□□ -0.72
EXOSC1-211ENST00000489158 CAMK4Q16566 473 aa10.54□□□□□ -0.72
EXOSC1-211ENST00000489158 PRPF40BQ6NWY9 871 aaKnown RBP10.54□□□□□ -0.72
EXOSC1-211ENST00000489158 EYA3Q99504 573 aa10.54□□□□□ -0.72
EXOSC1-211ENST00000489158 MAST3O60307 1309 aa10.53□□□□□ -0.72
EXOSC1-211ENST00000489158 KIF20AO95235 890 aa10.53□□□□□ -0.72
EXOSC1-211ENST00000489158 ADCK5Q3MIX3 580 aa10.53□□□□□ -0.72
EXOSC1-211ENST00000489158 DPP8Q6V1X1 898 aaPredicted RBP10.53□□□□□ -0.72
EXOSC1-211ENST00000489158 CCDC186Q7Z3E2 898 aa10.53□□□□□ -0.72
EXOSC1-211ENST00000489158 TDRD7Q8NHU6 1098 aaKnown RBP10.53□□□□□ -0.72
EXOSC1-211ENST00000489158 WDR66Q8TBY9 1149 aa10.53□□□□□ -0.72
EXOSC1-211ENST00000489158 FAM200AQ8TCP9 573 aa10.53□□□□□ -0.72
EXOSC1-211ENST00000489158 MAP4K1Q92918 833 aa10.53□□□□□ -0.72
EXOSC1-211ENST00000489158 JAKMIP1Q96N16 626 aaKnown RBP10.53□□□□□ -0.72
EXOSC1-211ENST00000489158 MRVI1Q9Y6F6 885 aa10.53□□□□□ -0.72
EXOSC1-211ENST00000489158 BRCA1P38398 1863 aaKnown RBP10.53□□□□□ -0.72
EXOSC1-211ENST00000489158 IL1R1P14778 569 aa10.52□□□□□ -0.72
EXOSC1-211ENST00000489158 LIG1P18858 919 aa10.52□□□□□ -0.72
EXOSC1-211ENST00000489158 TYRO3Q06418 890 aa10.52□□□□□ -0.72
EXOSC1-211ENST00000489158 ST3GAL1Q11201 340 aa10.52□□□□□ -0.72
EXOSC1-211ENST00000489158 MAP3K11Q16584 847 aa10.52□□□□□ -0.72
EXOSC1-211ENST00000489158 VPS53Q5VIR6 699 aa10.52□□□□□ -0.72
EXOSC1-211ENST00000489158 RNF20Q5VTR2 975 aa10.52□□□□□ -0.72
EXOSC1-211ENST00000489158 SPTY2D1Q68D10 685 aaPredicted RBP10.52□□□□□ -0.72
EXOSC1-211ENST00000489158 TTC6Q86TZ1 520 aa10.52□□□□□ -0.72
EXOSC1-211ENST00000489158 LUZP1Q86V48 1076 aa10.52□□□□□ -0.72
EXOSC1-211ENST00000489158 MAGEB6Q8N7X4 407 aa10.52□□□□□ -0.72
EXOSC1-211ENST00000489158 NECAB1Q8N987 351 aa10.52□□□□□ -0.72
EXOSC1-211ENST00000489158 SUPT20HQ8NEM7 779 aa10.52□□□□□ -0.72
EXOSC1-211ENST00000489158 OSBP2Q969R2 916 aa10.52□□□□□ -0.72
EXOSC1-211ENST00000489158 ZSCAN31Q96LW9 406 aaPredicted RBP10.52□□□□□ -0.72
EXOSC1-211ENST00000489158 DSCC1Q9BVC3 393 aa10.52□□□□□ -0.72
EXOSC1-211ENST00000489158 NUP62CLQ9H1M0 184 aa10.52□□□□□ -0.72
EXOSC1-211ENST00000489158 RAI14Q9P0K7 980 aa10.52□□□□□ -0.72
EXOSC1-211ENST00000489158 ZNF219Q9P2Y4 722 aaPredicted RBP10.52□□□□□ -0.72
EXOSC1-211ENST00000489158 POLLQ9UGP5 575 aa10.52□□□□□ -0.72
EXOSC1-211ENST00000489158 WWC3Q9ULE0 1092 aa10.52□□□□□ -0.72
EXOSC1-211ENST00000489158 ATF5Q9Y2D1 282 aaPredicted RBP10.52□□□□□ -0.72
EXOSC1-211ENST00000489158 RBM8AQ9Y5S9 174 aaKnown RBP10.52□□□□□ -0.72
EXOSC1-211ENST00000489158 ZNF532Q9HCE3 1301 aa10.52□□□□□ -0.73
EXOSC1-211ENST00000489158 M0R2C6 588 aa10.52□□□□□ -0.73
EXOSC1-211ENST00000489158 PDE6AP16499 860 aa10.52□□□□□ -0.73
EXOSC1-211ENST00000489158 NCBP1Q09161 790 aaKnown RBP10.52□□□□□ -0.73
EXOSC1-211ENST00000489158 LRMPQ12912 555 aa10.52□□□□□ -0.73
EXOSC1-211ENST00000489158 SOGA3Q5TF21 947 aa10.52□□□□□ -0.73
EXOSC1-211ENST00000489158 OLFM4Q6UX06 510 aa10.52□□□□□ -0.73
EXOSC1-211ENST00000489158 DRC7Q8IY82 874 aa10.52□□□□□ -0.73
EXOSC1-211ENST00000489158 TTLL6Q8N841 843 aa10.52□□□□□ -0.73
EXOSC1-211ENST00000489158 RTFDC1Q9BY42 306 aaPredicted RBP10.52□□□□□ -0.73
EXOSC1-211ENST00000489158 COA1Q9GZY4 146 aa10.52□□□□□ -0.73
EXOSC1-211ENST00000489158 PUS7LQ9H0K6 701 aaKnown RBP10.52□□□□□ -0.73
EXOSC1-211ENST00000489158 NRBP1Q9UHY1 535 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms