RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 FRMD6Q96NE9 622 aa6.67□□□□□ -1.34
RFC4-213ENST00000489028 KRTAP4-6Q9BYQ5 205 aa6.67□□□□□ -1.34
RFC4-213ENST00000489028 STOML1Q9UBI4 398 aa6.67□□□□□ -1.34
RFC4-213ENST00000489028 PCDHGC5Q9Y5F6 944 aa6.67□□□□□ -1.34
RFC4-213ENST00000489028 ZBTB7CA1YPR0 619 aa6.66□□□□□ -1.34
RFC4-213ENST00000489028 MAP4P27816 1152 aaKnown RBP6.66□□□□□ -1.34
RFC4-213ENST00000489028 DAB2P98082 770 aa6.66□□□□□ -1.34
RFC4-213ENST00000489028 CLEC10AQ8IUN9 316 aa6.66□□□□□ -1.34
RFC4-213ENST00000489028 GRIN3AQ8TCU5 1115 aa6.66□□□□□ -1.34
RFC4-213ENST00000489028 FBLIM1Q8WUP2 373 aa6.66□□□□□ -1.34
RFC4-213ENST00000489028 FAM83CQ9BQN1 747 aa6.66□□□□□ -1.34
RFC4-213ENST00000489028 KCNF1Q9H3M0 494 aa6.66□□□□□ -1.34
RFC4-213ENST00000489028 FAM105AQ9NUU6 356 aa6.66□□□□□ -1.34
RFC4-213ENST00000489028 AP4E1Q9UPM8 1137 aa6.66□□□□□ -1.34
RFC4-213ENST00000489028 HIF3AQ9Y2N7 669 aa6.66□□□□□ -1.34
RFC4-213ENST00000489028 TMPRSS2O15393 492 aa6.65□□□□□ -1.34
RFC4-213ENST00000489028 CTSHP09668 335 aa6.65□□□□□ -1.34
RFC4-213ENST00000489028 KIF4BQ2VIQ3 1234 aa6.65□□□□□ -1.34
RFC4-213ENST00000489028 HP1BP3Q5SSJ5 553 aaPredicted RBP6.65□□□□□ -1.34
RFC4-213ENST00000489028 ZMYM1Q5SVZ6 1142 aa6.65□□□□□ -1.34
RFC4-213ENST00000489028 MEI1Q5TIA1 1274 aa6.65□□□□□ -1.34
RFC4-213ENST00000489028 DYMQ7RTS9 669 aa6.65□□□□□ -1.34
RFC4-213ENST00000489028 KCNB2Q92953 911 aa6.65□□□□□ -1.34
RFC4-213ENST00000489028 CEP44Q9C0F1 390 aa6.65□□□□□ -1.34
RFC4-213ENST00000489028 GSX1Q9H4S2 264 aaPredicted RBP6.65□□□□□ -1.34
RFC4-213ENST00000489028 RAD18Q9NS91 495 aa6.65□□□□□ -1.34
RFC4-213ENST00000489028 KRT82Q9NSB4 513 aa6.65□□□□□ -1.34
RFC4-213ENST00000489028 CACNA2D2Q9NY47 1150 aa6.65□□□□□ -1.34
RFC4-213ENST00000489028 TTF2Q9UNY4 1162 aaKnown RBP6.65□□□□□ -1.34
RFC4-213ENST00000489028 IGLV1-40P01703 118 aa6.64□□□□□ -1.35
RFC4-213ENST00000489028 ERCC3P19447 782 aa6.64□□□□□ -1.35
RFC4-213ENST00000489028 PSMD2Q13200 908 aa6.64□□□□□ -1.35
RFC4-213ENST00000489028 TMCO4Q5TGY1 634 aa6.64□□□□□ -1.35
RFC4-213ENST00000489028 MAP1SQ66K74 1059 aaPredicted RBP6.64□□□□□ -1.35
RFC4-213ENST00000489028 RNF43Q68DV7 783 aa6.64□□□□□ -1.35
RFC4-213ENST00000489028 TMC4Q7Z404 712 aa6.64□□□□□ -1.35
RFC4-213ENST00000489028 SHISA5Q8N114 240 aa6.64□□□□□ -1.35
RFC4-213ENST00000489028 GPBAR1Q8TDU6 330 aa6.64□□□□□ -1.35
RFC4-213ENST00000489028 RAB6AP20340 208 aa6.63□□□□□ -1.35
RFC4-213ENST00000489028 RXRBP28702 533 aa6.63□□□□□ -1.35
RFC4-213ENST00000489028 USP11P51784 963 aa6.63□□□□□ -1.35
RFC4-213ENST00000489028 FGD1P98174 961 aa6.63□□□□□ -1.35
RFC4-213ENST00000489028 NFIAQ12857 509 aa6.63□□□□□ -1.35
RFC4-213ENST00000489028 TRIM26Q12899 539 aaPredicted RBP6.63□□□□□ -1.35
RFC4-213ENST00000489028 PCNX4Q63HM2 1172 aa6.63□□□□□ -1.35
RFC4-213ENST00000489028 EZH1Q92800 747 aaPredicted RBP6.63□□□□□ -1.35
RFC4-213ENST00000489028 SYNGAP1Q96PV0 1343 aa6.63□□□□□ -1.35
RFC4-213ENST00000489028 ACSS3Q9H6R3 686 aa6.63□□□□□ -1.35
RFC4-213ENST00000489028 CBX8Q9HC52 389 aa6.63□□□□□ -1.35
RFC4-213ENST00000489028 CRIM1Q9NZV1 1036 aa6.63□□□□□ -1.35
RFC4-213ENST00000489028 DYNC1LI2O43237 492 aaPredicted RBP6.62□□□□□ -1.35
RFC4-213ENST00000489028 NFICP08651 508 aa6.62□□□□□ -1.35
RFC4-213ENST00000489028 XPCQ01831 940 aaPredicted RBP6.62□□□□□ -1.35
RFC4-213ENST00000489028 ID3Q02535 119 aa6.62□□□□□ -1.35
RFC4-213ENST00000489028 SV2BQ7L1I2 683 aa6.62□□□□□ -1.35
RFC4-213ENST00000489028 ZDHHC13Q8IUH4 622 aa6.62□□□□□ -1.35
RFC4-213ENST00000489028 FANCD2OSQ96PS1 177 aa6.62□□□□□ -1.35
RFC4-213ENST00000489028 EMILIN2Q9BXX0 1053 aa6.62□□□□□ -1.35
RFC4-213ENST00000489028 SEMA6CQ9H3T2 930 aa6.62□□□□□ -1.35
RFC4-213ENST00000489028 DISC1Q9NRI5 854 aa6.62□□□□□ -1.35
RFC4-213ENST00000489028 FAM95CA0A1B0GW59 222 aa6.61□□□□□ -1.35
RFC4-213ENST00000489028 ASPAP45381 313 aa6.61□□□□□ -1.35
RFC4-213ENST00000489028 PTPN11Q06124 597 aaPredicted RBP6.61□□□□□ -1.35
RFC4-213ENST00000489028 GIPC2Q8TF65 315 aa6.61□□□□□ -1.35
RFC4-213ENST00000489028 MFSD14AQ96MC6 490 aa6.61□□□□□ -1.35
RFC4-213ENST00000489028 DBNDD2Q9BQY9 259 aa6.61□□□□□ -1.35
RFC4-213ENST00000489028 BCL2L13Q9BXK5 485 aa6.61□□□□□ -1.35
RFC4-213ENST00000489028 NEFMP07197 916 aa6.6□□□□□ -1.35
RFC4-213ENST00000489028 ADMP35318 185 aa6.6□□□□□ -1.35
RFC4-213ENST00000489028 MFAP1P55081 439 aaKnown RBP6.6□□□□□ -1.35
RFC4-213ENST00000489028 NFKBIBQ15653 356 aa6.6□□□□□ -1.35
RFC4-213ENST00000489028 CCDC85BQ15834 202 aaPredicted RBP6.6□□□□□ -1.35
RFC4-213ENST00000489028 ZC3H12AQ5D1E8 599 aaKnown RBP6.6□□□□□ -1.35
RFC4-213ENST00000489028 LLGL2Q6P1M3 1020 aa6.6□□□□□ -1.35
RFC4-213ENST00000489028 SEZ6L2Q6UXD5 910 aa6.6□□□□□ -1.35
RFC4-213ENST00000489028 SHKBP1Q8TBC3 707 aa6.6□□□□□ -1.35
RFC4-213ENST00000489028 GATA6Q92908 595 aa6.6□□□□□ -1.35
RFC4-213ENST00000489028 GAL3ST3Q96A11 431 aa6.6□□□□□ -1.35
RFC4-213ENST00000489028 PRKAG2Q9UGJ0 569 aa6.6□□□□□ -1.35
RFC4-213ENST00000489028 RNF112Q9ULX5 631 aa6.6□□□□□ -1.35
RFC4-213ENST00000489028 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.59□□□□□ -1.35
RFC4-213ENST00000489028 PRR19A6NJB7 356 aa6.59□□□□□ -1.35
RFC4-213ENST00000489028 GSC2O15499 205 aa6.59□□□□□ -1.35
RFC4-213ENST00000489028 TRIM37O94972 964 aa6.59□□□□□ -1.35
RFC4-213ENST00000489028 TGFB1P01137 390 aa6.59□□□□□ -1.35
RFC4-213ENST00000489028 F13BP05160 661 aa6.59□□□□□ -1.35
RFC4-213ENST00000489028 SLFN14P0C7P3 912 aa6.59□□□□□ -1.35
RFC4-213ENST00000489028 TTLL4Q14679 1199 aa6.59□□□□□ -1.35
RFC4-213ENST00000489028 MAP3K11Q16584 847 aa6.59□□□□□ -1.35
RFC4-213ENST00000489028 TTBK2Q6IQ55 1244 aa6.59□□□□□ -1.35
RFC4-213ENST00000489028 Q8N3U1 123 aa6.59□□□□□ -1.35
RFC4-213ENST00000489028 LGR6Q9HBX8 967 aa6.59□□□□□ -1.35
RFC4-213ENST00000489028 SAMM50Q9Y512 469 aa6.59□□□□□ -1.35
RFC4-213ENST00000489028 SORBS3O60504 671 aa6.58□□□□□ -1.36
RFC4-213ENST00000489028 MED26O95402 600 aa6.58□□□□□ -1.36
RFC4-213ENST00000489028 HCLS1P14317 486 aaPredicted RBP6.58□□□□□ -1.36
RFC4-213ENST00000489028 NTF4P34130 210 aa6.58□□□□□ -1.36
RFC4-213ENST00000489028 PAOXQ6QHF9 649 aa6.58□□□□□ -1.36
RFC4-213ENST00000489028 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.58□□□□□ -1.36
RFC4-213ENST00000489028 SLC51AQ86UW1 340 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms