RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 ALX1Q15699 326 aa12.99□□□□□ -0.33
COL21A1-211ENST00000488912 SOGA3Q5TF21 947 aa12.99□□□□□ -0.33
COL21A1-211ENST00000488912 NOL8Q76FK4 1167 aaKnown RBP12.99□□□□□ -0.33
COL21A1-211ENST00000488912 NAPBQ9H115 298 aa12.99□□□□□ -0.33
COL21A1-211ENST00000488912 ADAMTSL1Q8N6G6 1762 aa12.99□□□□□ -0.33
COL21A1-211ENST00000488912 COL4A5P29400 1685 aa12.99□□□□□ -0.33
COL21A1-211ENST00000488912 AK2P54819 239 aa12.99□□□□□ -0.33
COL21A1-211ENST00000488912 BLOC1S2Q6QNY1 142 aa12.99□□□□□ -0.33
COL21A1-211ENST00000488912 NLGN2Q8NFZ4 835 aa12.99□□□□□ -0.33
COL21A1-211ENST00000488912 NEK1Q96PY6 1258 aa12.99□□□□□ -0.33
COL21A1-211ENST00000488912 NBPF3Q9H094 633 aa12.99□□□□□ -0.33
COL21A1-211ENST00000488912 SPON1Q9HCB6 807 aa12.99□□□□□ -0.33
COL21A1-211ENST00000488912 ZNF277Q9NRM2 450 aaPredicted RBP12.99□□□□□ -0.33
COL21A1-211ENST00000488912 ARFGEF1Q9Y6D6 1849 aa12.98□□□□□ -0.33
COL21A1-211ENST00000488912 MROH7-TTC4A0A0A0MT08 1334 aa12.98□□□□□ -0.33
COL21A1-211ENST00000488912 ZNF213O14771 459 aa12.98□□□□□ -0.33
COL21A1-211ENST00000488912 RPS6KB1P23443 525 aa12.98□□□□□ -0.33
COL21A1-211ENST00000488912 TCEANC2Q96MN5 208 aa12.98□□□□□ -0.33
COL21A1-211ENST00000488912 NACAP1Q9BZK3 213 aa12.98□□□□□ -0.33
COL21A1-211ENST00000488912 PDRG1Q9NUG6 133 aa12.98□□□□□ -0.33
COL21A1-211ENST00000488912 TIAM2Q8IVF5 1701 aa12.98□□□□□ -0.33
COL21A1-211ENST00000488912 LAMB1P07942 1786 aa12.98□□□□□ -0.33
COL21A1-211ENST00000488912 TDO2P48775 406 aa12.97□□□□□ -0.33
COL21A1-211ENST00000488912 MCM2P49736 904 aa12.97□□□□□ -0.33
COL21A1-211ENST00000488912 SRCAPQ6ZRS2 3230 aa12.97□□□□□ -0.33
COL21A1-211ENST00000488912 UTRNP46939 3433 aa12.97□□□□□ -0.33
COL21A1-211ENST00000488912 F8W031 263 aaPredicted RBP12.97□□□□□ -0.33
COL21A1-211ENST00000488912 TBC1D10CQ8IV04 446 aa12.97□□□□□ -0.33
COL21A1-211ENST00000488912 SLKQ9H2G2 1235 aaPredicted RBP12.97□□□□□ -0.33
COL21A1-211ENST00000488912 BCS1LQ9Y276 419 aa12.97□□□□□ -0.33
COL21A1-211ENST00000488912 SUGT1Q9Y2Z0 365 aa12.97□□□□□ -0.33
COL21A1-211ENST00000488912 NAV1Q8NEY1 1877 aa12.97□□□□□ -0.33
COL21A1-211ENST00000488912 YDJCA8MPS7 323 aa12.96□□□□□ -0.33
COL21A1-211ENST00000488912 LDHCP07864 332 aa12.96□□□□□ -0.33
COL21A1-211ENST00000488912 DACT2Q5SW24 774 aa12.96□□□□□ -0.33
COL21A1-211ENST00000488912 STRIP1Q5VSL9 837 aa12.96□□□□□ -0.33
COL21A1-211ENST00000488912 TMX3Q96JJ7 454 aa12.96□□□□□ -0.33
COL21A1-211ENST00000488912 LARP6Q9BRS8 491 aaKnown RBP12.96□□□□□ -0.33
COL21A1-211ENST00000488912 CRNKL1Q9BZJ0 848 aaKnown RBP12.96□□□□□ -0.33
COL21A1-211ENST00000488912 FOCADQ5VW36 1801 aa12.96□□□□□ -0.33
COL21A1-211ENST00000488912 GAKO14976 1311 aa12.96□□□□□ -0.33
COL21A1-211ENST00000488912 BTDP43251 543 aa12.96□□□□□ -0.34
COL21A1-211ENST00000488912 LARGE2Q8N3Y3 721 aa12.96□□□□□ -0.34
COL21A1-211ENST00000488912 SH3RF3Q8TEJ3 882 aaPredicted RBP12.96□□□□□ -0.34
COL21A1-211ENST00000488912 TTF2Q9UNY4 1162 aaKnown RBP12.96□□□□□ -0.34
COL21A1-211ENST00000488912 USP17L3A6NCW0 530 aa12.95□□□□□ -0.34
COL21A1-211ENST00000488912 USP17L4A6NCW7 530 aa12.95□□□□□ -0.34
COL21A1-211ENST00000488912 BAG3O95817 575 aa12.95□□□□□ -0.34
COL21A1-211ENST00000488912 HSP90AA1P07900 732 aaKnown RBP12.95□□□□□ -0.34
COL21A1-211ENST00000488912 HMGB1P09429 215 aaKnown RBP12.95□□□□□ -0.34
COL21A1-211ENST00000488912 USP17L1Q7RTZ2 530 aa12.95□□□□□ -0.34
COL21A1-211ENST00000488912 FAM163AQ96GL9 167 aaPredicted RBP12.95□□□□□ -0.34
COL21A1-211ENST00000488912 NOL10Q9BSC4 688 aaKnown RBP12.95□□□□□ -0.34
COL21A1-211ENST00000488912 FOXD4L1Q9NU39 408 aa12.95□□□□□ -0.34
COL21A1-211ENST00000488912 GPR75-ASB3A0A0A6YYF3 556 aa12.95□□□□□ -0.34
COL21A1-211ENST00000488912 PPP4CP60510 307 aa12.95□□□□□ -0.34
COL21A1-211ENST00000488912 CTDSPL2Q05D32 466 aa12.95□□□□□ -0.34
COL21A1-211ENST00000488912 SLF2Q8IX21 1173 aa12.95□□□□□ -0.34
COL21A1-211ENST00000488912 TAOK3Q9H2K8 898 aa12.95□□□□□ -0.34
COL21A1-211ENST00000488912 DCP1AQ9NPI6 582 aaPredicted RBP12.95□□□□□ -0.34
COL21A1-211ENST00000488912 DAGLAQ9Y4D2 1042 aa12.95□□□□□ -0.34
COL21A1-211ENST00000488912 DDX60LQ5H9U9 1706 aaKnown RBP12.94□□□□□ -0.34
COL21A1-211ENST00000488912 NFKBIEO00221 500 aa12.94□□□□□ -0.34
COL21A1-211ENST00000488912 IARSP41252 1262 aaKnown RBP12.94□□□□□ -0.34
COL21A1-211ENST00000488912 SCNN1DP51172 638 aa12.94□□□□□ -0.34
COL21A1-211ENST00000488912 FKBP1AP62942 108 aaKnown RBP12.94□□□□□ -0.34
COL21A1-211ENST00000488912 TOB2Q14106 344 aaPredicted RBP12.94□□□□□ -0.34
COL21A1-211ENST00000488912 GIMAP6Q6P9H5 292 aa12.94□□□□□ -0.34
COL21A1-211ENST00000488912 DHX32Q7L7V1 743 aaKnown RBP12.94□□□□□ -0.34
COL21A1-211ENST00000488912 LRRC2Q9BYS8 371 aa12.94□□□□□ -0.34
COL21A1-211ENST00000488912 ECM29Q5VYK3 1845 aa12.94□□□□□ -0.34
COL21A1-211ENST00000488912 NEDD4P46934 1319 aa12.94□□□□□ -0.34
COL21A1-211ENST00000488912 SMIM22K7EJ46 135 aa12.94□□□□□ -0.34
COL21A1-211ENST00000488912 PPARAQ07869 468 aa12.94□□□□□ -0.34
COL21A1-211ENST00000488912 CHST3Q7LGC8 479 aa12.94□□□□□ -0.34
COL21A1-211ENST00000488912 KIAA0825Q8IV33 1275 aa12.94□□□□□ -0.34
COL21A1-211ENST00000488912 NCOA7Q8NI08 942 aa12.94□□□□□ -0.34
COL21A1-211ENST00000488912 NKX2-3Q8TAU0 364 aa12.94□□□□□ -0.34
COL21A1-211ENST00000488912 VPS33BQ9H267 617 aa12.94□□□□□ -0.34
COL21A1-211ENST00000488912 ATP8A2Q9NTI2 1148 aa12.94□□□□□ -0.34
COL21A1-211ENST00000488912 LIMCH1Q9UPQ0 1083 aa12.94□□□□□ -0.34
COL21A1-211ENST00000488912 TACC3Q9Y6A5 838 aa12.94□□□□□ -0.34
COL21A1-211ENST00000488912 CYP2D7A0A087X1C5 515 aa12.93□□□□□ -0.34
COL21A1-211ENST00000488912 MINDY4BA8MYZ0 360 aa12.93□□□□□ -0.34
COL21A1-211ENST00000488912 LARGE1O95461 756 aa12.93□□□□□ -0.34
COL21A1-211ENST00000488912 EXOSC10Q01780 885 aaKnown RBP12.93□□□□□ -0.34
COL21A1-211ENST00000488912 CTR9Q6PD62 1173 aa12.93□□□□□ -0.34
COL21A1-211ENST00000488912 RALYLQ86SE5 291 aaKnown RBP12.93□□□□□ -0.34
COL21A1-211ENST00000488912 MB21D2Q8IYB1 491 aaPredicted RBP12.93□□□□□ -0.34
COL21A1-211ENST00000488912 FHDC1Q9C0D6 1143 aaPredicted RBP12.93□□□□□ -0.34
COL21A1-211ENST00000488912 ALDH8A1Q9H2A2 487 aaPredicted RBP12.93□□□□□ -0.34
COL21A1-211ENST00000488912 INCENPQ9NQS7 918 aa12.93□□□□□ -0.34
COL21A1-211ENST00000488912 MYH1P12882 1939 aa12.93□□□□□ -0.34
COL21A1-211ENST00000488912 RHBDL3P58872 404 aa12.93□□□□□ -0.34
COL21A1-211ENST00000488912 Q6ZUG5 572 aa12.93□□□□□ -0.34
COL21A1-211ENST00000488912 CERS3Q8IU89 383 aa12.93□□□□□ -0.34
COL21A1-211ENST00000488912 MKRN1Q9UHC7 482 aaKnown RBP12.93□□□□□ -0.34
COL21A1-211ENST00000488912 TPCN1Q9ULQ1 816 aa12.93□□□□□ -0.34
COL21A1-211ENST00000488912 USP17L12C9JPN9 530 aa12.92□□□□□ -0.34
COL21A1-211ENST00000488912 USP17L21D6R901 530 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms