RNA–Protein interactions for RNA: ENST00000488338.2

LAMTOR4-210, Transcript of late endosomal/lysosomal adaptor, MAPK and MTOR activator 4, humanhuman

TSL 3

Gene LAMTOR4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMTOR4-210ENST00000488338 TICAM2Q86XR7 235 aa17.88■□□□□ 0.45
LAMTOR4-210ENST00000488338 EVI5LQ96CN4 794 aa17.88■□□□□ 0.45
LAMTOR4-210ENST00000488338 EDC3Q96F86 508 aaKnown RBP17.88■□□□□ 0.45
LAMTOR4-210ENST00000488338 VEZTQ9HBM0 779 aa17.88■□□□□ 0.45
LAMTOR4-210ENST00000488338 ZNF70Q9UC06 446 aaPredicted RBP17.88■□□□□ 0.45
LAMTOR4-210ENST00000488338 PCDHAC2Q9Y5I4 1007 aa17.88■□□□□ 0.45
LAMTOR4-210ENST00000488338 MYH2Q9UKX2 1941 aa17.88■□□□□ 0.45
LAMTOR4-210ENST00000488338 MAST2Q6P0Q8 1798 aa17.87■□□□□ 0.45
LAMTOR4-210ENST00000488338 DOCK2Q92608 1830 aa17.87■□□□□ 0.45
LAMTOR4-210ENST00000488338 CLRN2A0PK11 232 aa17.87■□□□□ 0.45
LAMTOR4-210ENST00000488338 PDE4AP27815 886 aa17.87■□□□□ 0.45
LAMTOR4-210ENST00000488338 FKBP1CQ5VVH2 108 aa17.87■□□□□ 0.45
LAMTOR4-210ENST00000488338 ZNF384Q8TF68 577 aa17.87■□□□□ 0.45
LAMTOR4-210ENST00000488338 USP40Q9NVE5 1235 aa17.87■□□□□ 0.45
LAMTOR4-210ENST00000488338 PPP2R3BQ9Y5P8 575 aa17.87■□□□□ 0.45
LAMTOR4-210ENST00000488338 TRIM6-TRIM34B2RNG4 842 aa17.86■□□□□ 0.45
LAMTOR4-210ENST00000488338 PDE6AP16499 860 aa17.86■□□□□ 0.45
LAMTOR4-210ENST00000488338 UBE3CQ15386 1083 aa17.86■□□□□ 0.45
LAMTOR4-210ENST00000488338 FSD1Q9BTV5 496 aa17.86■□□□□ 0.45
LAMTOR4-210ENST00000488338 ASTN2O75129 1339 aaPredicted RBP17.86■□□□□ 0.45
LAMTOR4-210ENST00000488338 ECM29Q5VYK3 1845 aa17.86■□□□□ 0.45
LAMTOR4-210ENST00000488338 ADD2P35612 726 aa17.85■□□□□ 0.45
LAMTOR4-210ENST00000488338 PPP4CP60510 307 aa17.85■□□□□ 0.45
LAMTOR4-210ENST00000488338 CDC42EP5Q6NZY7 148 aa17.85■□□□□ 0.45
LAMTOR4-210ENST00000488338 USP48Q86UV5 1035 aa17.85■□□□□ 0.45
LAMTOR4-210ENST00000488338 GLIS2Q9BZE0 524 aaPredicted RBP17.85■□□□□ 0.45
LAMTOR4-210ENST00000488338 ZNF532Q9HCE3 1301 aa17.85■□□□□ 0.45
LAMTOR4-210ENST00000488338 ITGBL1O95965 494 aaPredicted RBP17.84■□□□□ 0.45
LAMTOR4-210ENST00000488338 FAM83AQ86UY5 434 aa17.84■□□□□ 0.45
LAMTOR4-210ENST00000488338 RILPL2Q969X0 211 aa17.84■□□□□ 0.45
LAMTOR4-210ENST00000488338 DEFB129Q9H1M3 183 aa17.84■□□□□ 0.45
LAMTOR4-210ENST00000488338 AATFQ9NY61 560 aaKnown RBP eCLIP17.84■□□□□ 0.45
LAMTOR4-210ENST00000488338 MYO5AQ9Y4I1 1855 aaKnown RBP17.84■□□□□ 0.45
LAMTOR4-210ENST00000488338 MAGEB6P1A0A0J9YX57 407 aa17.83■□□□□ 0.44
LAMTOR4-210ENST00000488338 TCP10L2B9ZVM9 353 aa17.83■□□□□ 0.44
LAMTOR4-210ENST00000488338 RNF113AO15541 343 aaKnown RBP17.83■□□□□ 0.44
LAMTOR4-210ENST00000488338 IDI2Q9BXS1 227 aa17.83■□□□□ 0.44
LAMTOR4-210ENST00000488338 TCRBV5S4A2TA0A5A2 114 aa17.82■□□□□ 0.44
LAMTOR4-210ENST00000488338 ADM5C9JUS6 153 aa17.82■□□□□ 0.44
LAMTOR4-210ENST00000488338 NF2P35240 595 aa17.82■□□□□ 0.44
LAMTOR4-210ENST00000488338 C1QTNF8P60827 252 aa17.82■□□□□ 0.44
LAMTOR4-210ENST00000488338 RASA3Q14644 834 aa17.82■□□□□ 0.44
LAMTOR4-210ENST00000488338 TTC22Q5TAA0 569 aa17.82■□□□□ 0.44
LAMTOR4-210ENST00000488338 ADGRA1Q86SQ6 560 aa17.82■□□□□ 0.44
LAMTOR4-210ENST00000488338 TEX11Q8IYF3 940 aa17.82■□□□□ 0.44
LAMTOR4-210ENST00000488338 RFX7Q2KHR2 1363 aa17.81■□□□□ 0.44
LAMTOR4-210ENST00000488338 PASKQ96RG2 1323 aa17.81■□□□□ 0.44
LAMTOR4-210ENST00000488338 POLR2AP24928 1970 aaKnown RBP17.81■□□□□ 0.44
LAMTOR4-210ENST00000488338 HIP1O00291 1037 aa17.81■□□□□ 0.44
LAMTOR4-210ENST00000488338 ENTPD3O75355 529 aa17.81■□□□□ 0.44
LAMTOR4-210ENST00000488338 NPM3O75607 178 aaKnown RBP17.81■□□□□ 0.44
LAMTOR4-210ENST00000488338 RHBDL3P58872 404 aa17.81■□□□□ 0.44
LAMTOR4-210ENST00000488338 SUPT20HL1Q3ZLR7 823 aa17.81■□□□□ 0.44
LAMTOR4-210ENST00000488338 MIGA1Q8NAN2 632 aa17.81■□□□□ 0.44
LAMTOR4-210ENST00000488338 FAM151AQ8WW52 585 aa17.81■□□□□ 0.44
LAMTOR4-210ENST00000488338 APPBP2Q92624 585 aa17.81■□□□□ 0.44
LAMTOR4-210ENST00000488338 AIDAQ96BJ3 306 aa17.81■□□□□ 0.44
LAMTOR4-210ENST00000488338 HOOK2Q96ED9 719 aa17.81■□□□□ 0.44
LAMTOR4-210ENST00000488338 CACNB3P54284 484 aa17.8■□□□□ 0.44
LAMTOR4-210ENST00000488338 SH3RF3Q8TEJ3 882 aaPredicted RBP17.8■□□□□ 0.44
LAMTOR4-210ENST00000488338 CDCA5Q96FF9 252 aa17.8■□□□□ 0.44
LAMTOR4-210ENST00000488338 CRNKL1Q9BZJ0 848 aaKnown RBP17.8■□□□□ 0.44
LAMTOR4-210ENST00000488338 MYH7P12883 1935 aa17.8■□□□□ 0.44
LAMTOR4-210ENST00000488338 TRAF5O00463 557 aa17.79■□□□□ 0.44
LAMTOR4-210ENST00000488338 RGS3P49796 1198 aa17.79■□□□□ 0.44
LAMTOR4-210ENST00000488338 DYNLL1P63167 89 aaKnown RBP17.79■□□□□ 0.44
LAMTOR4-210ENST00000488338 WDHD1O75717 1129 aaPredicted RBP17.78■□□□□ 0.44
LAMTOR4-210ENST00000488338 USP5P45974 858 aa17.78■□□□□ 0.44
LAMTOR4-210ENST00000488338 APLP1P51693 650 aa17.78■□□□□ 0.44
LAMTOR4-210ENST00000488338 NFIAQ12857 509 aa17.78■□□□□ 0.44
LAMTOR4-210ENST00000488338 PICALMQ13492 652 aa17.78■□□□□ 0.44
LAMTOR4-210ENST00000488338 RIOK1Q9BRS2 568 aaKnown RBP17.78■□□□□ 0.44
LAMTOR4-210ENST00000488338 ZNF408Q9H9D4 720 aa17.78■□□□□ 0.44
LAMTOR4-210ENST00000488338 FAM198AQ9UFP1 575 aa17.78■□□□□ 0.44
LAMTOR4-210ENST00000488338 SCAF8Q9UPN6 1271 aaKnown RBP17.78■□□□□ 0.44
LAMTOR4-210ENST00000488338 RPAP1Q9BWH6 1393 aaPredicted RBP17.78■□□□□ 0.44
LAMTOR4-210ENST00000488338 TMEM88BA6NKF7 163 aa17.77■□□□□ 0.44
LAMTOR4-210ENST00000488338 MBD4O95243 580 aa17.77■□□□□ 0.44
LAMTOR4-210ENST00000488338 CELF2O95319 508 aaKnown RBP17.77■□□□□ 0.44
LAMTOR4-210ENST00000488338 GSPT1P15170 499 aaKnown RBP17.77■□□□□ 0.44
LAMTOR4-210ENST00000488338 FKBP1BP68106 108 aa17.77■□□□□ 0.44
LAMTOR4-210ENST00000488338 TCP10Q12799 353 aa17.77■□□□□ 0.44
LAMTOR4-210ENST00000488338 ZMYM1Q5SVZ6 1142 aa17.77■□□□□ 0.44
LAMTOR4-210ENST00000488338 ZSCAN29Q8IWY8 852 aaPredicted RBP17.77■□□□□ 0.44
LAMTOR4-210ENST00000488338 C2orf69Q8N8R5 385 aa17.77■□□□□ 0.44
LAMTOR4-210ENST00000488338 TGFBRAP1Q8WUH2 860 aa17.77■□□□□ 0.44
LAMTOR4-210ENST00000488338 DDRGK1Q96HY6 314 aa17.77■□□□□ 0.44
LAMTOR4-210ENST00000488338 TMEM39BQ9GZU3 492 aa17.77■□□□□ 0.44
LAMTOR4-210ENST00000488338 PUS7LQ9H0K6 701 aaKnown RBP17.77■□□□□ 0.44
LAMTOR4-210ENST00000488338 HELLSQ9NRZ9 838 aa17.77■□□□□ 0.44
LAMTOR4-210ENST00000488338 CNTNAP1P78357 1384 aa17.77■□□□□ 0.43
LAMTOR4-210ENST00000488338 PPP1R12BO60237 982 aaPredicted RBP17.76■□□□□ 0.43
LAMTOR4-210ENST00000488338 GNAT2P19087 354 aa17.76■□□□□ 0.43
LAMTOR4-210ENST00000488338 SDSP20132 328 aa17.76■□□□□ 0.43
LAMTOR4-210ENST00000488338 OSBP2Q969R2 916 aa17.76■□□□□ 0.43
LAMTOR4-210ENST00000488338 DHX36Q9H2U1 1008 aaKnown RBP17.76■□□□□ 0.43
LAMTOR4-210ENST00000488338 ARMT1Q9H993 441 aa17.76■□□□□ 0.43
LAMTOR4-210ENST00000488338 DIAPH3Q9NSV4 1193 aa17.76■□□□□ 0.43
LAMTOR4-210ENST00000488338 MFAP1P55081 439 aaKnown RBP17.75■□□□□ 0.43
LAMTOR4-210ENST00000488338 PRAMEF18Q5VWM3 479 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms