RNA–Protein interactions for RNA: ENST00000488235.1

PCYT1A-215, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-215ENST00000488235 ALDH1A1P00352 501 aa13.96□□□□□ -0.17
PCYT1A-215ENST00000488235 TCP10Q12799 353 aa13.96□□□□□ -0.17
PCYT1A-215ENST00000488235 RASGRF1Q13972 1273 aa13.96□□□□□ -0.17
PCYT1A-215ENST00000488235 FKBP1CQ5VVH2 108 aa13.96□□□□□ -0.17
PCYT1A-215ENST00000488235 MIGA2Q7L4E1 593 aa13.96□□□□□ -0.17
PCYT1A-215ENST00000488235 OTUD5Q96G74 571 aa13.96□□□□□ -0.17
PCYT1A-215ENST00000488235 WRNIP1Q96S55 665 aa13.96□□□□□ -0.17
PCYT1A-215ENST00000488235 FAM198AQ9UFP1 575 aa13.96□□□□□ -0.17
PCYT1A-215ENST00000488235 A0A1B0GUL7 405 aa13.95□□□□□ -0.18
PCYT1A-215ENST00000488235 GNAI3P08754 354 aa13.95□□□□□ -0.18
PCYT1A-215ENST00000488235 SLURP2P0DP57 97 aa13.95□□□□□ -0.18
PCYT1A-215ENST00000488235 FAM43AQ8N2R8 423 aa13.95□□□□□ -0.18
PCYT1A-215ENST00000488235 TMEM57Q8N5G2 664 aa13.95□□□□□ -0.18
PCYT1A-215ENST00000488235 SALL1Q9NSC2 1324 aa13.94□□□□□ -0.18
PCYT1A-215ENST00000488235 SPDYE5A6NIY4 337 aa13.94□□□□□ -0.18
PCYT1A-215ENST00000488235 LDHBP07195 334 aaKnown RBP13.94□□□□□ -0.18
PCYT1A-215ENST00000488235 INPP5BP32019 993 aa13.94□□□□□ -0.18
PCYT1A-215ENST00000488235 PKN2Q16513 984 aaKnown RBP13.94□□□□□ -0.18
PCYT1A-215ENST00000488235 FBXO46Q6PJ61 603 aaPredicted RBP13.94□□□□□ -0.18
PCYT1A-215ENST00000488235 PI16Q6UXB8 463 aa13.94□□□□□ -0.18
PCYT1A-215ENST00000488235 OTOP1Q7RTM1 612 aa13.94□□□□□ -0.18
PCYT1A-215ENST00000488235 CD99L2Q8TCZ2 262 aa13.94□□□□□ -0.18
PCYT1A-215ENST00000488235 ZNF384Q8TF68 577 aa13.94□□□□□ -0.18
PCYT1A-215ENST00000488235 XAGE2Q96GT9 111 aa13.94□□□□□ -0.18
PCYT1A-215ENST00000488235 TMOD2Q9NZR1 351 aa13.94□□□□□ -0.18
PCYT1A-215ENST00000488235 DENND2AQ9ULE3 1009 aa13.94□□□□□ -0.18
PCYT1A-215ENST00000488235 TRIM17Q9Y577 477 aa13.94□□□□□ -0.18
PCYT1A-215ENST00000488235 RPAP1Q9BWH6 1393 aaPredicted RBP13.94□□□□□ -0.18
PCYT1A-215ENST00000488235 PDE4DIPQ5VU43 2346 aa13.93□□□□□ -0.18
PCYT1A-215ENST00000488235 CCL15-CCL14A0A0B4J2E2 113 aa13.93□□□□□ -0.18
PCYT1A-215ENST00000488235 IRF6O14896 467 aa13.93□□□□□ -0.18
PCYT1A-215ENST00000488235 HNRNPUQ00839 825 aaKnown RBP eCLIP13.93□□□□□ -0.18
PCYT1A-215ENST00000488235 CCL15Q16663 113 aa13.93□□□□□ -0.18
PCYT1A-215ENST00000488235 FAM151AQ8WW52 585 aa13.93□□□□□ -0.18
PCYT1A-215ENST00000488235 USP40Q9NVE5 1235 aa13.93□□□□□ -0.18
PCYT1A-215ENST00000488235 GNL3LQ9NVN8 582 aaKnown RBP13.93□□□□□ -0.18
PCYT1A-215ENST00000488235 CSADQ9Y600 493 aa13.93□□□□□ -0.18
PCYT1A-215ENST00000488235 RFX7Q2KHR2 1363 aa13.93□□□□□ -0.18
PCYT1A-215ENST00000488235 ATRNL1Q5VV63 1379 aa13.93□□□□□ -0.18
PCYT1A-215ENST00000488235 GAKO14976 1311 aa13.92□□□□□ -0.18
PCYT1A-215ENST00000488235 SEMA3EO15041 775 aa13.92□□□□□ -0.18
PCYT1A-215ENST00000488235 ZBTB22O15209 634 aa13.92□□□□□ -0.18
PCYT1A-215ENST00000488235 IPO8O15397 1037 aaKnown RBP13.92□□□□□ -0.18
PCYT1A-215ENST00000488235 GNAI2P04899 355 aa13.92□□□□□ -0.18
PCYT1A-215ENST00000488235 RLBP1P12271 317 aa13.92□□□□□ -0.18
PCYT1A-215ENST00000488235 SH3BP5LQ7L8J4 393 aa13.92□□□□□ -0.18
PCYT1A-215ENST00000488235 C1orf115Q9H7X2 142 aa13.92□□□□□ -0.18
PCYT1A-215ENST00000488235 HDAC5Q9UQL6 1122 aa13.92□□□□□ -0.18
PCYT1A-215ENST00000488235 GTF2A2P52657 109 aa13.91□□□□□ -0.18
PCYT1A-215ENST00000488235 ERO1BQ86YB8 467 aa13.91□□□□□ -0.18
PCYT1A-215ENST00000488235 DDX4Q9NQI0 724 aaKnown RBP13.91□□□□□ -0.18
PCYT1A-215ENST00000488235 HMG20BQ9P0W2 317 aa13.91□□□□□ -0.18
PCYT1A-215ENST00000488235 ABCF2Q9UG63 623 aa13.91□□□□□ -0.18
PCYT1A-215ENST00000488235 ZNF112Q9UJU3 913 aa13.91□□□□□ -0.18
PCYT1A-215ENST00000488235 BTBD19C9JJ37 291 aa13.9□□□□□ -0.18
PCYT1A-215ENST00000488235 WDHD1O75717 1129 aaPredicted RBP13.9□□□□□ -0.18
PCYT1A-215ENST00000488235 RGS3P49796 1198 aa13.9□□□□□ -0.18
PCYT1A-215ENST00000488235 SP3Q02447 781 aa13.9□□□□□ -0.18
PCYT1A-215ENST00000488235 DIEXFQ68CQ4 756 aaKnown RBP13.9□□□□□ -0.18
PCYT1A-215ENST00000488235 OTUD7BQ6GQQ9 843 aa13.9□□□□□ -0.18
PCYT1A-215ENST00000488235 TBC1D9Q6ZT07 1266 aa13.9□□□□□ -0.18
PCYT1A-215ENST00000488235 NEUROD6Q96NK8 337 aa13.9□□□□□ -0.18
PCYT1A-215ENST00000488235 ZNF341Q9BYN7 854 aa13.9□□□□□ -0.18
PCYT1A-215ENST00000488235 PDS5AQ29RF7 1337 aaKnown RBP13.9□□□□□ -0.19
PCYT1A-215ENST00000488235 PHF20L1A8MW92 1017 aa13.89□□□□□ -0.19
PCYT1A-215ENST00000488235 MECOMQ03112 1051 aa13.89□□□□□ -0.19
PCYT1A-215ENST00000488235 PPIL2Q13356 520 aa13.89□□□□□ -0.19
PCYT1A-215ENST00000488235 MOGSQ13724 837 aa13.89□□□□□ -0.19
PCYT1A-215ENST00000488235 MVPQ14764 893 aaKnown RBP13.89□□□□□ -0.19
PCYT1A-215ENST00000488235 TAF1CQ15572 869 aaPredicted RBP13.89□□□□□ -0.19
PCYT1A-215ENST00000488235 ZKSCAN2Q63HK3 967 aa13.89□□□□□ -0.19
PCYT1A-215ENST00000488235 DCAF15Q66K64 600 aa13.89□□□□□ -0.19
PCYT1A-215ENST00000488235 DZIP1Q86YF9 867 aaKnown RBP13.89□□□□□ -0.19
PCYT1A-215ENST00000488235 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.89□□□□□ -0.19
PCYT1A-215ENST00000488235 ARHGAP39Q9C0H5 1083 aa13.89□□□□□ -0.19
PCYT1A-215ENST00000488235 AKAP2Q9Y2D5 859 aa13.89□□□□□ -0.19
PCYT1A-215ENST00000488235 PTPN22Q9Y2R2 807 aa13.89□□□□□ -0.19
PCYT1A-215ENST00000488235 MYH2Q9UKX2 1941 aa13.89□□□□□ -0.19
PCYT1A-215ENST00000488235 ZSWIM8A7E2V4 1837 aa13.89□□□□□ -0.19
PCYT1A-215ENST00000488235 POTEFA5A3E0 1075 aa13.88□□□□□ -0.19
PCYT1A-215ENST00000488235 DDTLA6NHG4 134 aaPredicted RBP13.88□□□□□ -0.19
PCYT1A-215ENST00000488235 MCAMP43121 646 aa13.88□□□□□ -0.19
PCYT1A-215ENST00000488235 BTDP43251 543 aa13.88□□□□□ -0.19
PCYT1A-215ENST00000488235 RHBDL3P58872 404 aa13.88□□□□□ -0.19
PCYT1A-215ENST00000488235 SNAPC2Q13487 334 aa13.88□□□□□ -0.19
PCYT1A-215ENST00000488235 POLA2Q14181 598 aa13.88□□□□□ -0.19
PCYT1A-215ENST00000488235 FAM163AQ96GL9 167 aaPredicted RBP13.88□□□□□ -0.19
PCYT1A-215ENST00000488235 ERO1AQ96HE7 468 aa13.88□□□□□ -0.19
PCYT1A-215ENST00000488235 IDI2Q9BXS1 227 aa13.88□□□□□ -0.19
PCYT1A-215ENST00000488235 EFCC1Q9HA90 598 aa13.88□□□□□ -0.19
PCYT1A-215ENST00000488235 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.88□□□□□ -0.19
PCYT1A-215ENST00000488235 MROH7-TTC4A0A0A0MT08 1334 aa13.88□□□□□ -0.19
PCYT1A-215ENST00000488235 CETPP11597 493 aa13.87□□□□□ -0.19
PCYT1A-215ENST00000488235 ARID4AP29374 1257 aaPredicted RBP13.87□□□□□ -0.19
PCYT1A-215ENST00000488235 PPATQ06203 517 aa13.87□□□□□ -0.19
PCYT1A-215ENST00000488235 ZGPATQ8N5A5 531 aaKnown RBP13.87□□□□□ -0.19
PCYT1A-215ENST00000488235 SPATA5Q8NB90 893 aa13.87□□□□□ -0.19
PCYT1A-215ENST00000488235 HOOK2Q96ED9 719 aa13.87□□□□□ -0.19
PCYT1A-215ENST00000488235 ZFYVE28Q9HCC9 887 aa13.87□□□□□ -0.19
PCYT1A-215ENST00000488235 ZBTB7BO15156 539 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms