RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 SLURP2P0DP57 97 aa20.86■□□□□ 0.93
SHROOM1-205ENST00000488072 CYP7A1P22680 504 aa20.86■□□□□ 0.93
SHROOM1-205ENST00000488072 NAA16Q6N069 864 aaPredicted RBP20.86■□□□□ 0.93
SHROOM1-205ENST00000488072 MOB2Q70IA6 237 aa20.86■□□□□ 0.93
SHROOM1-205ENST00000488072 MIGA1Q8NAN2 632 aa20.86■□□□□ 0.93
SHROOM1-205ENST00000488072 CNTNAP1P78357 1384 aa20.85■□□□□ 0.93
SHROOM1-205ENST00000488072 CELF2O95319 508 aaKnown RBP20.85■□□□□ 0.93
SHROOM1-205ENST00000488072 PDE6AP16499 860 aa20.85■□□□□ 0.93
SHROOM1-205ENST00000488072 MMP14P50281 582 aa20.85■□□□□ 0.93
SHROOM1-205ENST00000488072 RHBDL3P58872 404 aa20.85■□□□□ 0.93
SHROOM1-205ENST00000488072 RASA3Q14644 834 aa20.85■□□□□ 0.93
SHROOM1-205ENST00000488072 TMEM39BQ9GZU3 492 aa20.85■□□□□ 0.93
SHROOM1-205ENST00000488072 DEFB129Q9H1M3 183 aa20.85■□□□□ 0.93
SHROOM1-205ENST00000488072 AATFQ9NY61 560 aaKnown RBP eCLIP20.85■□□□□ 0.93
SHROOM1-205ENST00000488072 STAP2Q9UGK3 403 aa20.85■□□□□ 0.93
SHROOM1-205ENST00000488072 TTC41PQ6P2S7 1318 aa20.84■□□□□ 0.93
SHROOM1-205ENST00000488072 PITPNM2Q9BZ72 1349 aa20.84■□□□□ 0.93
SHROOM1-205ENST00000488072 GPR75-ASB3A0A0A6YYF3 556 aa20.84■□□□□ 0.93
SHROOM1-205ENST00000488072 TCP10Q12799 353 aa20.84■□□□□ 0.93
SHROOM1-205ENST00000488072 PRKG1Q13976 671 aa20.84■□□□□ 0.93
SHROOM1-205ENST00000488072 NBPF12Q5TAG4 269 aaPredicted RBP20.84■□□□□ 0.93
SHROOM1-205ENST00000488072 SH3RF3Q8TEJ3 882 aaPredicted RBP20.84■□□□□ 0.93
SHROOM1-205ENST00000488072 FAM163AQ96GL9 167 aaPredicted RBP20.84■□□□□ 0.93
SHROOM1-205ENST00000488072 GPATCH3Q96I76 525 aa20.84■□□□□ 0.93
SHROOM1-205ENST00000488072 DDX4Q9NQI0 724 aaKnown RBP20.84■□□□□ 0.93
SHROOM1-205ENST00000488072 FAM198AQ9UFP1 575 aa20.84■□□□□ 0.93
SHROOM1-205ENST00000488072 ZNF532Q9HCE3 1301 aa20.83■□□□□ 0.93
SHROOM1-205ENST00000488072 TCRBV5S4A2TA0A5A2 114 aa20.83■□□□□ 0.93
SHROOM1-205ENST00000488072 MYO1BO43795 1136 aa20.83■□□□□ 0.93
SHROOM1-205ENST00000488072 WDHD1O75717 1129 aaPredicted RBP20.83■□□□□ 0.93
SHROOM1-205ENST00000488072 HSPA6P17066 643 aa20.83■□□□□ 0.93
SHROOM1-205ENST00000488072 APLP1P51693 650 aa20.83■□□□□ 0.93
SHROOM1-205ENST00000488072 SLC9C2Q5TAH2 1124 aa20.83■□□□□ 0.93
SHROOM1-205ENST00000488072 APOBEC3FQ8IUX4 373 aaKnown RBP20.82■□□□□ 0.92
SHROOM1-205ENST00000488072 CCDC136Q96JN2 1154 aa20.82■□□□□ 0.92
SHROOM1-205ENST00000488072 TEPSINQ96N21 525 aa20.82■□□□□ 0.92
SHROOM1-205ENST00000488072 MYH2Q9UKX2 1941 aa20.82■□□□□ 0.92
SHROOM1-205ENST00000488072 GLRX3O76003 335 aaKnown RBP20.81■□□□□ 0.92
SHROOM1-205ENST00000488072 GSTO1P78417 241 aa20.81■□□□□ 0.92
SHROOM1-205ENST00000488072 MAP3K12Q12852 859 aa20.81■□□□□ 0.92
SHROOM1-205ENST00000488072 PICALMQ13492 652 aa20.81■□□□□ 0.92
SHROOM1-205ENST00000488072 SSC5DA1L4H1 1573 aa20.8■□□□□ 0.92
SHROOM1-205ENST00000488072 LDHCP07864 332 aa20.8■□□□□ 0.92
SHROOM1-205ENST00000488072 ADD2P35612 726 aa20.8■□□□□ 0.92
SHROOM1-205ENST00000488072 RGS3P49796 1198 aa20.8■□□□□ 0.92
SHROOM1-205ENST00000488072 TTF1Q15361 905 aaPredicted RBP20.8■□□□□ 0.92
SHROOM1-205ENST00000488072 SH3BP5LQ7L8J4 393 aa20.8■□□□□ 0.92
SHROOM1-205ENST00000488072 DOCK2Q92608 1830 aa20.79■□□□□ 0.92
SHROOM1-205ENST00000488072 ERC2O15083 957 aa20.79■□□□□ 0.92
SHROOM1-205ENST00000488072 KBTBD3Q8NAB2 608 aa20.79■□□□□ 0.92
SHROOM1-205ENST00000488072 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.79■□□□□ 0.92
SHROOM1-205ENST00000488072 RFX7Q2KHR2 1363 aa20.79■□□□□ 0.92
SHROOM1-205ENST00000488072 TMEM88BA6NKF7 163 aa20.78■□□□□ 0.92
SHROOM1-205ENST00000488072 PPP4CP60510 307 aa20.78■□□□□ 0.92
SHROOM1-205ENST00000488072 SLF2Q8IX21 1173 aa20.78■□□□□ 0.92
SHROOM1-205ENST00000488072 TEX11Q8IYF3 940 aa20.78■□□□□ 0.92
SHROOM1-205ENST00000488072 LCORLQ8N3X6 602 aa20.78■□□□□ 0.92
SHROOM1-205ENST00000488072 SEC62Q99442 399 aaKnown RBP20.78■□□□□ 0.92
SHROOM1-205ENST00000488072 RIOK1Q9BRS2 568 aaKnown RBP20.78■□□□□ 0.92
SHROOM1-205ENST00000488072 ARMT1Q9H993 441 aa20.78■□□□□ 0.92
SHROOM1-205ENST00000488072 UBE2Q2LH0YL09 131 aa20.77■□□□□ 0.92
SHROOM1-205ENST00000488072 PRKAB2O43741 272 aa20.77■□□□□ 0.92
SHROOM1-205ENST00000488072 EVX2Q03828 476 aa20.77■□□□□ 0.92
SHROOM1-205ENST00000488072 SLC4A8Q2Y0W8 1093 aa20.77■□□□□ 0.92
SHROOM1-205ENST00000488072 CENPQQ7L2Z9 268 aaPredicted RBP20.77■□□□□ 0.92
SHROOM1-205ENST00000488072 MAPKAPK5Q8IW41 473 aa20.77■□□□□ 0.92
SHROOM1-205ENST00000488072 TGFBRAP1Q8WUH2 860 aa20.77■□□□□ 0.92
SHROOM1-205ENST00000488072 PUS7LQ9H0K6 701 aaKnown RBP20.77■□□□□ 0.92
SHROOM1-205ENST00000488072 TMOD2Q9NZR1 351 aa20.77■□□□□ 0.92
SHROOM1-205ENST00000488072 MAST2Q6P0Q8 1798 aa20.77■□□□□ 0.91
SHROOM1-205ENST00000488072 DDTLA6NHG4 134 aaPredicted RBP20.76■□□□□ 0.91
SHROOM1-205ENST00000488072 GSPT1P15170 499 aaKnown RBP20.76■□□□□ 0.91
SHROOM1-205ENST00000488072 OSBP2Q969R2 916 aa20.76■□□□□ 0.91
SHROOM1-205ENST00000488072 FSD1Q9BTV5 496 aa20.76■□□□□ 0.91
SHROOM1-205ENST00000488072 OSBPL3Q9H4L5 887 aa20.76■□□□□ 0.91
SHROOM1-205ENST00000488072 GBA2Q9HCG7 927 aaPredicted RBP20.76■□□□□ 0.91
SHROOM1-205ENST00000488072 MKRN1Q9UHC7 482 aaKnown RBP20.76■□□□□ 0.91
SHROOM1-205ENST00000488072 MAGEB6P1A0A0J9YX57 407 aa20.75■□□□□ 0.91
SHROOM1-205ENST00000488072 M0R2C6 588 aa20.75■□□□□ 0.91
SHROOM1-205ENST00000488072 MBD4O95243 580 aa20.75■□□□□ 0.91
SHROOM1-205ENST00000488072 MIGA2Q7L4E1 593 aa20.75■□□□□ 0.91
SHROOM1-205ENST00000488072 FAM151AQ8WW52 585 aa20.75■□□□□ 0.91
SHROOM1-205ENST00000488072 RILPL2Q969X0 211 aa20.75■□□□□ 0.91
SHROOM1-205ENST00000488072 IDI2Q9BXS1 227 aa20.75■□□□□ 0.91
SHROOM1-205ENST00000488072 SAP30BPQ9UHR5 308 aaKnown RBP20.75■□□□□ 0.91
SHROOM1-205ENST00000488072 ABT1Q9ULW3 272 aaKnown RBP20.75■□□□□ 0.91
SHROOM1-205ENST00000488072 ECM29Q5VYK3 1845 aa20.75■□□□□ 0.91
SHROOM1-205ENST00000488072 TRIM6-TRIM34B2RNG4 842 aa20.74■□□□□ 0.91
SHROOM1-205ENST00000488072 SMIM22K7EJ46 135 aa20.74■□□□□ 0.91
SHROOM1-205ENST00000488072 RNF113AO15541 343 aaKnown RBP20.74■□□□□ 0.91
SHROOM1-205ENST00000488072 FKBP1CQ5VVH2 108 aa20.74■□□□□ 0.91
SHROOM1-205ENST00000488072 CREBZFQ9NS37 354 aa20.74■□□□□ 0.91
SHROOM1-205ENST00000488072 PPP4R2Q9NY27 417 aa20.74■□□□□ 0.91
SHROOM1-205ENST00000488072 FAM196BA6NMK8 535 aa20.73■□□□□ 0.91
SHROOM1-205ENST00000488072 USP2O75604 605 aaPredicted RBP20.73■□□□□ 0.91
SHROOM1-205ENST00000488072 BAG3O95817 575 aa20.73■□□□□ 0.91
SHROOM1-205ENST00000488072 TNNI2P48788 182 aa20.73■□□□□ 0.91
SHROOM1-205ENST00000488072 TTLL12Q14166 644 aaPredicted RBP20.73■□□□□ 0.91
SHROOM1-205ENST00000488072 CCDC129Q6ZRS4 1044 aa20.73■□□□□ 0.91
SHROOM1-205ENST00000488072 FAM83AQ86UY5 434 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms