RNA–Protein interactions for RNA: ENST00000487996.5

HLA-DMB-261, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-261ENST00000487996 ZNF384Q8TF68 577 aa12.63□□□□□ -0.39
HLA-DMB-261ENST00000487996 MAP4K1Q92918 833 aa12.63□□□□□ -0.39
HLA-DMB-261ENST00000487996 TBC1D32Q96NH3 1257 aa12.63□□□□□ -0.39
HLA-DMB-261ENST00000487996 STRBPQ96SI9 672 aaKnown RBP12.63□□□□□ -0.39
HLA-DMB-261ENST00000487996 CRNKL1Q9BZJ0 848 aaKnown RBP12.63□□□□□ -0.39
HLA-DMB-261ENST00000487996 SERPINA10Q9UK55 444 aa12.63□□□□□ -0.39
HLA-DMB-261ENST00000487996 GAKO14976 1311 aa12.63□□□□□ -0.39
HLA-DMB-261ENST00000487996 GPR75-ASB3A0A0A6YYF3 556 aa12.62□□□□□ -0.39
HLA-DMB-261ENST00000487996 F8W031 263 aaPredicted RBP12.62□□□□□ -0.39
HLA-DMB-261ENST00000487996 HSPD1P10809 573 aaKnown RBP12.62□□□□□ -0.39
HLA-DMB-261ENST00000487996 RBM25P49756 843 aaKnown RBP12.62□□□□□ -0.39
HLA-DMB-261ENST00000487996 PPP4CP60510 307 aa12.62□□□□□ -0.39
HLA-DMB-261ENST00000487996 DIXDC1Q155Q3 683 aa12.62□□□□□ -0.39
HLA-DMB-261ENST00000487996 SLFNL1Q499Z3 407 aa12.62□□□□□ -0.39
HLA-DMB-261ENST00000487996 CCDC129Q6ZRS4 1044 aa12.62□□□□□ -0.39
HLA-DMB-261ENST00000487996 KIAA0825Q8IV33 1275 aa12.62□□□□□ -0.39
HLA-DMB-261ENST00000487996 RIOK1Q9BRS2 568 aaKnown RBP12.62□□□□□ -0.39
HLA-DMB-261ENST00000487996 ZMYM6O95789 1325 aa12.62□□□□□ -0.39
HLA-DMB-261ENST00000487996 ZC3H4Q9UPT8 1303 aaKnown RBP12.62□□□□□ -0.39
HLA-DMB-261ENST00000487996 APPP05067 770 aa12.62□□□□□ -0.39
HLA-DMB-261ENST00000487996 ZKSCAN1P17029 563 aaPredicted RBP12.62□□□□□ -0.39
HLA-DMB-261ENST00000487996 ANAPC15P60006 121 aa12.62□□□□□ -0.39
HLA-DMB-261ENST00000487996 GRIK5Q16478 980 aa12.62□□□□□ -0.39
HLA-DMB-261ENST00000487996 ADGRA1Q86SQ6 560 aa12.62□□□□□ -0.39
HLA-DMB-261ENST00000487996 ARMT1Q9H993 441 aa12.62□□□□□ -0.39
HLA-DMB-261ENST00000487996 AATFQ9NY61 560 aaKnown RBP eCLIP12.62□□□□□ -0.39
HLA-DMB-261ENST00000487996 RNF181Q9P0P0 153 aa12.62□□□□□ -0.39
HLA-DMB-261ENST00000487996 PATL2C9JE40 543 aaKnown RBP12.61□□□□□ -0.39
HLA-DMB-261ENST00000487996 USP17L8P0C7I0 530 aa12.61□□□□□ -0.39
HLA-DMB-261ENST00000487996 BTDP43251 543 aa12.61□□□□□ -0.39
HLA-DMB-261ENST00000487996 CRKP46108 304 aa12.61□□□□□ -0.39
HLA-DMB-261ENST00000487996 GIMAP6Q6P9H5 292 aa12.61□□□□□ -0.39
HLA-DMB-261ENST00000487996 LCORLQ8N3X6 602 aa12.61□□□□□ -0.39
HLA-DMB-261ENST00000487996 IL27Q8NEV9 243 aa12.61□□□□□ -0.39
HLA-DMB-261ENST00000487996 DPF2Q92785 391 aa12.61□□□□□ -0.39
HLA-DMB-261ENST00000487996 ZDHHC15Q96MV8 337 aa12.61□□□□□ -0.39
HLA-DMB-261ENST00000487996 GMLQ99445 158 aa12.61□□□□□ -0.39
HLA-DMB-261ENST00000487996 MXD3Q9BW11 206 aa12.61□□□□□ -0.39
HLA-DMB-261ENST00000487996 DAGLAQ9Y4D2 1042 aa12.61□□□□□ -0.39
HLA-DMB-261ENST00000487996 RBM8AQ9Y5S9 174 aaKnown RBP12.61□□□□□ -0.39
HLA-DMB-261ENST00000487996 SLC4A4Q9Y6R1 1079 aa12.61□□□□□ -0.39
HLA-DMB-261ENST00000487996 HSPA4P34932 840 aa12.6□□□□□ -0.39
HLA-DMB-261ENST00000487996 PTH1RQ03431 593 aa12.6□□□□□ -0.39
HLA-DMB-261ENST00000487996 ALX1Q15699 326 aa12.6□□□□□ -0.39
HLA-DMB-261ENST00000487996 GPC2Q8N158 579 aa12.6□□□□□ -0.39
HLA-DMB-261ENST00000487996 NAPBQ9H115 298 aa12.6□□□□□ -0.39
HLA-DMB-261ENST00000487996 ATP8A2Q9NTI2 1148 aa12.6□□□□□ -0.39
HLA-DMB-261ENST00000487996 SCNN1DP51172 638 aa12.59□□□□□ -0.39
HLA-DMB-261ENST00000487996 PRELPP51888 382 aa12.59□□□□□ -0.39
HLA-DMB-261ENST00000487996 RBM5P52756 815 aaKnown RBP eCLIP12.59□□□□□ -0.39
HLA-DMB-261ENST00000487996 IMMTQ16891 758 aaKnown RBP12.59□□□□□ -0.39
HLA-DMB-261ENST00000487996 C9orf131Q5VYM1 1079 aa12.59□□□□□ -0.39
HLA-DMB-261ENST00000487996 AMOTL1Q8IY63 956 aa12.59□□□□□ -0.39
HLA-DMB-261ENST00000487996 TSHZ2Q9NRE2 1034 aa12.59□□□□□ -0.39
HLA-DMB-261ENST00000487996 TIAM2Q8IVF5 1701 aa12.59□□□□□ -0.39
HLA-DMB-261ENST00000487996 TDO2P48775 406 aa12.59□□□□□ -0.39
HLA-DMB-261ENST00000487996 DYNLL1P63167 89 aaKnown RBP12.59□□□□□ -0.39
HLA-DMB-261ENST00000487996 KRT32Q14532 448 aa12.59□□□□□ -0.39
HLA-DMB-261ENST00000487996 NECTIN1Q15223 517 aa12.59□□□□□ -0.39
HLA-DMB-261ENST00000487996 VPS53Q5VIR6 699 aa12.59□□□□□ -0.39
HLA-DMB-261ENST00000487996 GJA3Q9Y6H8 435 aa12.59□□□□□ -0.39
HLA-DMB-261ENST00000487996 GSG1L2A8MUP6 293 aa12.58□□□□□ -0.4
HLA-DMB-261ENST00000487996 FGAP02671 866 aa12.58□□□□□ -0.4
HLA-DMB-261ENST00000487996 USP5P45974 858 aa12.58□□□□□ -0.4
HLA-DMB-261ENST00000487996 DLGAP5Q15398 846 aa12.58□□□□□ -0.4
HLA-DMB-261ENST00000487996 DPY19L2Q6NUT2 758 aa12.58□□□□□ -0.4
HLA-DMB-261ENST00000487996 TEX11Q8IYF3 940 aa12.58□□□□□ -0.4
HLA-DMB-261ENST00000487996 IFNL3Q8IZI9 196 aa12.58□□□□□ -0.4
HLA-DMB-261ENST00000487996 MTMR14Q8NCE2 650 aa12.58□□□□□ -0.4
HLA-DMB-261ENST00000487996 TMOD2Q9NZR1 351 aa12.58□□□□□ -0.4
HLA-DMB-261ENST00000487996 ZNF541Q9H0D2 1346 aa12.57□□□□□ -0.4
HLA-DMB-261ENST00000487996 ZNF213O14771 459 aa12.57□□□□□ -0.4
HLA-DMB-261ENST00000487996 MYO1BO43795 1136 aa12.57□□□□□ -0.4
HLA-DMB-261ENST00000487996 CFAP100Q494V2 611 aa12.57□□□□□ -0.4
HLA-DMB-261ENST00000487996 CREB3L3Q68CJ9 461 aa12.57□□□□□ -0.4
HLA-DMB-261ENST00000487996 CHRDL2Q6WN34 429 aa12.57□□□□□ -0.4
HLA-DMB-261ENST00000487996 SH3RF3Q8TEJ3 882 aaPredicted RBP12.57□□□□□ -0.4
HLA-DMB-261ENST00000487996 ARPP21Q9UBL0 812 aaPredicted RBP12.57□□□□□ -0.4
HLA-DMB-261ENST00000487996 H7C1D1 291 aa12.57□□□□□ -0.4
HLA-DMB-261ENST00000487996 SLC27A2O14975 620 aa12.57□□□□□ -0.4
HLA-DMB-261ENST00000487996 PSMA5P28066 241 aa12.57□□□□□ -0.4
HLA-DMB-261ENST00000487996 GMPSP49915 693 aaPredicted RBP12.57□□□□□ -0.4
HLA-DMB-261ENST00000487996 RHBDL3P58872 404 aa12.57□□□□□ -0.4
HLA-DMB-261ENST00000487996 ZNF280AP59817 542 aaPredicted RBP12.57□□□□□ -0.4
HLA-DMB-261ENST00000487996 C1QTNF8P60827 252 aa12.57□□□□□ -0.4
HLA-DMB-261ENST00000487996 TSGA10IPQ3SY00 556 aa12.57□□□□□ -0.4
HLA-DMB-261ENST00000487996 APOBEC3HQ6NTF7 200 aaKnown RBP12.57□□□□□ -0.4
HLA-DMB-261ENST00000487996 SDR42E1Q8WUS8 393 aa12.57□□□□□ -0.4
HLA-DMB-261ENST00000487996 KCNB2Q92953 911 aa12.57□□□□□ -0.4
HLA-DMB-261ENST00000487996 IL17RAQ96F46 866 aa12.57□□□□□ -0.4
HLA-DMB-261ENST00000487996 LAMA4Q16363 1823 aa12.56□□□□□ -0.4
HLA-DMB-261ENST00000487996 SPDYE2BA6NHP3 402 aa12.56□□□□□ -0.4
HLA-DMB-261ENST00000487996 FOXP2O15409 715 aa12.56□□□□□ -0.4
HLA-DMB-261ENST00000487996 PRKAB2O43741 272 aa12.56□□□□□ -0.4
HLA-DMB-261ENST00000487996 SLC3A2P08195 630 aaKnown RBP12.56□□□□□ -0.4
HLA-DMB-261ENST00000487996 SPDYE6P0CI01 402 aa12.56□□□□□ -0.4
HLA-DMB-261ENST00000487996 ANP32AP39687 249 aaKnown RBP12.56□□□□□ -0.4
HLA-DMB-261ENST00000487996 RABEP1Q15276 862 aa12.56□□□□□ -0.4
HLA-DMB-261ENST00000487996 CDC42EP5Q6NZY7 148 aa12.56□□□□□ -0.4
HLA-DMB-261ENST00000487996 EPB41L4AQ9HCS5 686 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms