RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 MYRFLQ96LU7 910 aa8.15□□□□□ -1.1
BRCA1-217ENST00000487825 RBCK1Q9BYM8 510 aa8.15□□□□□ -1.1
BRCA1-217ENST00000487825 CLEC4MQ9H2X3 399 aaPredicted RBP8.15□□□□□ -1.1
BRCA1-217ENST00000487825 SOX17Q9H6I2 414 aaPredicted RBP8.15□□□□□ -1.1
BRCA1-217ENST00000487825 UGGT2Q9NYU1 1516 aa8.14□□□□□ -1.11
BRCA1-217ENST00000487825 GADD45BO75293 160 aaPredicted RBP8.14□□□□□ -1.11
BRCA1-217ENST00000487825 DLGAP3O95886 979 aa8.14□□□□□ -1.11
BRCA1-217ENST00000487825 BMP3P12645 472 aa8.14□□□□□ -1.11
BRCA1-217ENST00000487825 UVSSAQ2YD98 709 aa8.14□□□□□ -1.11
BRCA1-217ENST00000487825 ARTNQ5T4W7 220 aa8.14□□□□□ -1.11
BRCA1-217ENST00000487825 NUTM2GQ5VZR2 741 aa8.14□□□□□ -1.11
BRCA1-217ENST00000487825 DMRTB1Q96MA1 342 aa8.14□□□□□ -1.11
BRCA1-217ENST00000487825 CSRNP1Q96S65 589 aa8.14□□□□□ -1.11
BRCA1-217ENST00000487825 DNAJC25Q9H1X3 360 aa8.14□□□□□ -1.11
BRCA1-217ENST00000487825 KCNF1Q9H3M0 494 aa8.14□□□□□ -1.11
BRCA1-217ENST00000487825 SETD1BQ9UPS6 1966 aaKnown RBP8.13□□□□□ -1.11
BRCA1-217ENST00000487825 PHLDB1Q86UU1 1377 aa8.13□□□□□ -1.11
BRCA1-217ENST00000487825 HMX2A2RU54 273 aa8.13□□□□□ -1.11
BRCA1-217ENST00000487825 MEGF11A6BM72 1044 aa8.13□□□□□ -1.11
BRCA1-217ENST00000487825 TMC7Q7Z402 723 aa8.13□□□□□ -1.11
BRCA1-217ENST00000487825 TRIM42Q8IWZ5 723 aa8.13□□□□□ -1.11
BRCA1-217ENST00000487825 C12orf50Q8NA57 414 aaPredicted RBP8.13□□□□□ -1.11
BRCA1-217ENST00000487825 EPS8L3Q8TE67 593 aaKnown RBP8.13□□□□□ -1.11
BRCA1-217ENST00000487825 C7orf69Q9H7B7 122 aa8.13□□□□□ -1.11
BRCA1-217ENST00000487825 DCTN4Q9UJW0 460 aa8.13□□□□□ -1.11
BRCA1-217ENST00000487825 GAS2O43903 313 aaKnown RBP8.12□□□□□ -1.11
BRCA1-217ENST00000487825 MAPK1P28482 360 aa8.12□□□□□ -1.11
BRCA1-217ENST00000487825 FAM20CQ8IXL6 584 aa8.12□□□□□ -1.11
BRCA1-217ENST00000487825 TMPRSS13Q9BYE2 586 aa8.12□□□□□ -1.11
BRCA1-217ENST00000487825 ZFP64Q9NPA5 681 aa8.12□□□□□ -1.11
BRCA1-217ENST00000487825 ABCA8O94911 1581 aa8.12□□□□□ -1.11
BRCA1-217ENST00000487825 NEO1Q92859 1461 aa8.12□□□□□ -1.11
BRCA1-217ENST00000487825 ARID4BQ4LE39 1312 aaPredicted RBP8.11□□□□□ -1.11
BRCA1-217ENST00000487825 IGLV1-40P01703 118 aa8.11□□□□□ -1.11
BRCA1-217ENST00000487825 DRD2P14416 443 aa8.11□□□□□ -1.11
BRCA1-217ENST00000487825 LRP8Q14114 963 aa8.11□□□□□ -1.11
BRCA1-217ENST00000487825 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.11□□□□□ -1.11
BRCA1-217ENST00000487825 ALKBH8Q96BT7 664 aaKnown RBP8.11□□□□□ -1.11
BRCA1-217ENST00000487825 RNF112Q9ULX5 631 aa8.11□□□□□ -1.11
BRCA1-217ENST00000487825 IVNS1ABPQ9Y6Y0 642 aa8.11□□□□□ -1.11
BRCA1-217ENST00000487825 FANCAO15360 1455 aa8.11□□□□□ -1.11
BRCA1-217ENST00000487825 PTPRTO14522 1441 aa8.11□□□□□ -1.11
BRCA1-217ENST00000487825 HYAL3O43820 417 aaPredicted RBP8.1□□□□□ -1.11
BRCA1-217ENST00000487825 MAOBP27338 520 aa8.1□□□□□ -1.11
BRCA1-217ENST00000487825 EXOSC6Q5RKV6 272 aaKnown RBP8.1□□□□□ -1.11
BRCA1-217ENST00000487825 PI16Q6UXB8 463 aa8.1□□□□□ -1.11
BRCA1-217ENST00000487825 BEND4Q6ZU67 534 aa8.1□□□□□ -1.11
BRCA1-217ENST00000487825 SLC51AQ86UW1 340 aa8.1□□□□□ -1.11
BRCA1-217ENST00000487825 NRSN2Q9GZP1 204 aa8.1□□□□□ -1.11
BRCA1-217ENST00000487825 ZNF576Q9H609 170 aa8.1□□□□□ -1.11
BRCA1-217ENST00000487825 CYP4F12Q9HCS2 524 aa8.1□□□□□ -1.11
BRCA1-217ENST00000487825 ABCB6Q9NP58 842 aa8.1□□□□□ -1.11
BRCA1-217ENST00000487825 POGZQ7Z3K3 1410 aa8.1□□□□□ -1.11
BRCA1-217ENST00000487825 GSC2O15499 205 aa8.09□□□□□ -1.11
BRCA1-217ENST00000487825 CTSBP07858 339 aa8.09□□□□□ -1.11
BRCA1-217ENST00000487825 ITPKAP23677 461 aa8.09□□□□□ -1.11
BRCA1-217ENST00000487825 POU4F3Q15319 338 aa8.09□□□□□ -1.11
BRCA1-217ENST00000487825 SGO2Q562F6 1265 aa8.09□□□□□ -1.11
BRCA1-217ENST00000487825 CLEC10AQ8IUN9 316 aa8.09□□□□□ -1.11
BRCA1-217ENST00000487825 SMG8Q8ND04 991 aaKnown RBP8.09□□□□□ -1.11
BRCA1-217ENST00000487825 ZMYM4Q5VZL5 1548 aa8.08□□□□□ -1.12
BRCA1-217ENST00000487825 TMEM238LA0A1B0GVL6 79 aa8.08□□□□□ -1.12
BRCA1-217ENST00000487825 RAPGEF3O95398 923 aa8.08□□□□□ -1.12
BRCA1-217ENST00000487825 B3GALT4O96024 378 aa8.08□□□□□ -1.12
BRCA1-217ENST00000487825 CYP11A1P05108 521 aa8.08□□□□□ -1.12
BRCA1-217ENST00000487825 RXRBP28702 533 aa8.08□□□□□ -1.12
BRCA1-217ENST00000487825 SSTR4P31391 388 aa8.08□□□□□ -1.12
BRCA1-217ENST00000487825 ZNF157P51786 506 aaPredicted RBP8.08□□□□□ -1.12
BRCA1-217ENST00000487825 PLCB3Q01970 1234 aa8.08□□□□□ -1.12
BRCA1-217ENST00000487825 NFIAQ12857 509 aa8.08□□□□□ -1.12
BRCA1-217ENST00000487825 GRM2Q14416 872 aa8.08□□□□□ -1.12
BRCA1-217ENST00000487825 FAM83CQ9BQN1 747 aa8.08□□□□□ -1.12
BRCA1-217ENST00000487825 SUGCTQ9HAC7 445 aa8.08□□□□□ -1.12
BRCA1-217ENST00000487825 ARHGEF12Q9NZN5 1544 aa8.08□□□□□ -1.12
BRCA1-217ENST00000487825 KIF27Q86VH2 1401 aa8.07□□□□□ -1.12
BRCA1-217ENST00000487825 EIF4EBP3O60516 100 aaPredicted RBP8.07□□□□□ -1.12
BRCA1-217ENST00000487825 TIAF1O95411 115 aa8.07□□□□□ -1.12
BRCA1-217ENST00000487825 ECEL1O95672 775 aa8.07□□□□□ -1.12
BRCA1-217ENST00000487825 MAP4P27816 1152 aaKnown RBP8.07□□□□□ -1.12
BRCA1-217ENST00000487825 RNF43Q68DV7 783 aa8.07□□□□□ -1.12
BRCA1-217ENST00000487825 PRPF40BQ6NWY9 871 aaKnown RBP8.07□□□□□ -1.12
BRCA1-217ENST00000487825 NBPF11Q86T75 865 aa8.07□□□□□ -1.12
BRCA1-217ENST00000487825 GLIS3Q8NEA6 775 aa8.07□□□□□ -1.12
BRCA1-217ENST00000487825 TRIM56Q9BRZ2 755 aaKnown RBP8.07□□□□□ -1.12
BRCA1-217ENST00000487825 NLRP2Q9NX02 1062 aa8.07□□□□□ -1.12
BRCA1-217ENST00000487825 TRAK1Q9UPV9 953 aa8.07□□□□□ -1.12
BRCA1-217ENST00000487825 HIF3AQ9Y2N7 669 aa8.07□□□□□ -1.12
BRCA1-217ENST00000487825 CTTNBP2Q8WZ74 1663 aa8.07□□□□□ -1.12
BRCA1-217ENST00000487825 EFCAB5A4FU69 1503 aa8.07□□□□□ -1.12
BRCA1-217ENST00000487825 PNMA6FA0A0J9YX94 578 aa8.06□□□□□ -1.12
BRCA1-217ENST00000487825 TGFB1P01137 390 aa8.06□□□□□ -1.12
BRCA1-217ENST00000487825 USP11P51784 963 aa8.06□□□□□ -1.12
BRCA1-217ENST00000487825 KCNA1Q09470 495 aa8.06□□□□□ -1.12
BRCA1-217ENST00000487825 DSC3Q14574 896 aa8.06□□□□□ -1.12
BRCA1-217ENST00000487825 DDX54Q8TDD1 881 aaKnown RBP8.06□□□□□ -1.12
BRCA1-217ENST00000487825 CORO1BQ9BR76 489 aa8.06□□□□□ -1.12
BRCA1-217ENST00000487825 CFAP74Q9C0B2 1584 aa8.05□□□□□ -1.12
BRCA1-217ENST00000487825 ZFYVE16Q7Z3T8 1539 aa8.05□□□□□ -1.12
BRCA1-217ENST00000487825 TREHO43280 583 aa8.05□□□□□ -1.12
BRCA1-217ENST00000487825 FCGRTP55899 365 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms