RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 IL1R1P14778 569 aa7.64□□□□□ -1.19
COL4A3-206ENST00000487633 IRF5Q13568 498 aa7.64□□□□□ -1.19
COL4A3-206ENST00000487633 RIC3Q7Z5B4 369 aa7.64□□□□□ -1.19
COL4A3-206ENST00000487633 CCDC84Q86UT8 332 aaPredicted RBP7.64□□□□□ -1.19
COL4A3-206ENST00000487633 PPM1EQ8WY54 764 aa7.64□□□□□ -1.19
COL4A3-206ENST00000487633 TRIB2Q92519 343 aa7.64□□□□□ -1.19
COL4A3-206ENST00000487633 SYMPKQ92797 1274 aaKnown RBP7.64□□□□□ -1.19
COL4A3-206ENST00000487633 CFAP53Q96M91 514 aa7.64□□□□□ -1.19
COL4A3-206ENST00000487633 OGDHLQ9ULD0 1010 aa7.64□□□□□ -1.19
COL4A3-206ENST00000487633 KCNH4Q9UQ05 1017 aa7.64□□□□□ -1.19
COL4A3-206ENST00000487633 FAM205AQ6ZU69 1335 aa7.63□□□□□ -1.19
COL4A3-206ENST00000487633 CHL1O00533 1208 aa7.63□□□□□ -1.19
COL4A3-206ENST00000487633 TNPO2O14787 897 aaKnown RBP7.63□□□□□ -1.19
COL4A3-206ENST00000487633 CRKP46108 304 aa7.63□□□□□ -1.19
COL4A3-206ENST00000487633 MMP14P50281 582 aa7.63□□□□□ -1.19
COL4A3-206ENST00000487633 PPATQ06203 517 aa7.63□□□□□ -1.19
COL4A3-206ENST00000487633 CWF19L2Q2TBE0 894 aaKnown RBP7.63□□□□□ -1.19
COL4A3-206ENST00000487633 ADAMTS19Q8TE59 1207 aa7.63□□□□□ -1.19
COL4A3-206ENST00000487633 KHSRPQ92945 711 aaKnown RBP eCLIP7.63□□□□□ -1.19
COL4A3-206ENST00000487633 CDC5LQ99459 802 aaKnown RBP7.63□□□□□ -1.19
COL4A3-206ENST00000487633 EPHX3Q9H6B9 360 aa7.63□□□□□ -1.19
COL4A3-206ENST00000487633 GJD2Q9UKL4 321 aa7.63□□□□□ -1.19
COL4A3-206ENST00000487633 TTF2Q9UNY4 1162 aaKnown RBP7.63□□□□□ -1.19
COL4A3-206ENST00000487633 PLXNA1Q9UIW2 1896 aa7.63□□□□□ -1.19
COL4A3-206ENST00000487633 GBF1Q92538 1859 aa7.62□□□□□ -1.19
COL4A3-206ENST00000487633 ITGA6P23229 1130 aa7.62□□□□□ -1.19
COL4A3-206ENST00000487633 ITGB8P26012 769 aa7.62□□□□□ -1.19
COL4A3-206ENST00000487633 CCND3P30281 292 aaPredicted RBP7.62□□□□□ -1.19
COL4A3-206ENST00000487633 RIPK4P57078 832 aa7.62□□□□□ -1.19
COL4A3-206ENST00000487633 POTEEQ6S8J3 1075 aa7.62□□□□□ -1.19
COL4A3-206ENST00000487633 ANKRD13CQ8N6S4 541 aa7.62□□□□□ -1.19
COL4A3-206ENST00000487633 ANKLE1Q8NAG6 615 aa7.62□□□□□ -1.19
COL4A3-206ENST00000487633 CCDC191Q8NCU4 936 aa7.62□□□□□ -1.19
COL4A3-206ENST00000487633 LRFN3Q9BTN0 628 aa7.62□□□□□ -1.19
COL4A3-206ENST00000487633 C11orf16Q9NQ32 467 aa7.62□□□□□ -1.19
COL4A3-206ENST00000487633 CWC25Q9NXE8 425 aaPredicted RBP7.62□□□□□ -1.19
COL4A3-206ENST00000487633 LAS1LQ9Y4W2 734 aaKnown RBP7.62□□□□□ -1.19
COL4A3-206ENST00000487633 MUC6Q6W4X9 2439 aa7.62□□□□□ -1.19
COL4A3-206ENST00000487633 ATN1P54259 1190 aaPredicted RBP7.61□□□□□ -1.19
COL4A3-206ENST00000487633 EPHB4P54760 987 aa7.61□□□□□ -1.19
COL4A3-206ENST00000487633 MFSD14BQ5SR56 506 aa7.61□□□□□ -1.19
COL4A3-206ENST00000487633 DUSP27Q5VZP5 1158 aa7.61□□□□□ -1.19
COL4A3-206ENST00000487633 LHX8Q68G74 356 aa7.61□□□□□ -1.19
COL4A3-206ENST00000487633 SH3RF1Q7Z6J0 888 aa7.61□□□□□ -1.19
COL4A3-206ENST00000487633 ZFPM1Q8IX07 1006 aa7.61□□□□□ -1.19
COL4A3-206ENST00000487633 DBF4Q9UBU7 674 aaPredicted RBP7.61□□□□□ -1.19
COL4A3-206ENST00000487633 IQSEC3Q9UPP2 1182 aaPredicted RBP7.61□□□□□ -1.19
COL4A3-206ENST00000487633 DAGLAQ9Y4D2 1042 aa7.61□□□□□ -1.19
COL4A3-206ENST00000487633 WDFY4Q6ZS81 3184 aa7.61□□□□□ -1.19
COL4A3-206ENST00000487633 CHD9Q3L8U1 2897 aa7.61□□□□□ -1.19
COL4A3-206ENST00000487633 DOCK1Q14185 1865 aa7.6□□□□□ -1.19
COL4A3-206ENST00000487633 DOCK2Q92608 1830 aa7.6□□□□□ -1.19
COL4A3-206ENST00000487633 ELL2O00472 640 aaPredicted RBP7.6□□□□□ -1.19
COL4A3-206ENST00000487633 WDHD1O75717 1129 aaPredicted RBP7.6□□□□□ -1.19
COL4A3-206ENST00000487633 HMGCRP04035 888 aa7.6□□□□□ -1.19
COL4A3-206ENST00000487633 GYG1P46976 350 aa7.6□□□□□ -1.19
COL4A3-206ENST00000487633 CASP7P55210 303 aa7.6□□□□□ -1.19
COL4A3-206ENST00000487633 FKBP1AP62942 108 aaKnown RBP7.6□□□□□ -1.19
COL4A3-206ENST00000487633 TNFAIP1Q13829 316 aa7.6□□□□□ -1.19
COL4A3-206ENST00000487633 CCL14Q16627 93 aa7.6□□□□□ -1.19
COL4A3-206ENST00000487633 TREML2Q5T2D2 321 aa7.6□□□□□ -1.19
COL4A3-206ENST00000487633 MAP3K21Q5TCX8 1036 aa7.6□□□□□ -1.19
COL4A3-206ENST00000487633 C15orf52Q6ZUT6 534 aaKnown RBP7.6□□□□□ -1.19
COL4A3-206ENST00000487633 ZNF594Q96JF6 807 aaPredicted RBP7.6□□□□□ -1.19
COL4A3-206ENST00000487633 ASB2Q96Q27 587 aa7.6□□□□□ -1.19
COL4A3-206ENST00000487633 UHRF1Q96T88 793 aaPredicted RBP7.6□□□□□ -1.19
COL4A3-206ENST00000487633 PARK7Q99497 189 aaKnown RBP7.6□□□□□ -1.19
COL4A3-206ENST00000487633 METTL22Q9BUU2 404 aaPredicted RBP7.6□□□□□ -1.19
COL4A3-206ENST00000487633 HMX1Q9NP08 348 aaPredicted RBP7.6□□□□□ -1.19
COL4A3-206ENST00000487633 ZNF112Q9UJU3 913 aa7.6□□□□□ -1.19
COL4A3-206ENST00000487633 TRIM35Q9UPQ4 493 aa7.6□□□□□ -1.19
COL4A3-206ENST00000487633 CHD7Q9P2D1 2997 aa7.59□□□□□ -1.19
COL4A3-206ENST00000487633 LOC285556D6RIA3 1793 aa7.59□□□□□ -1.19
COL4A3-206ENST00000487633 A0A0G2JLL6 359 aaPredicted RBP7.59□□□□□ -1.19
COL4A3-206ENST00000487633 FAM86C2PA6NEL3 165 aa7.59□□□□□ -1.19
COL4A3-206ENST00000487633 CYP2B6P20813 491 aa7.59□□□□□ -1.19
COL4A3-206ENST00000487633 IGHMBP2P38935 993 aaKnown RBP7.59□□□□□ -1.19
COL4A3-206ENST00000487633 TMPOP42166 694 aaKnown RBP7.59□□□□□ -1.19
COL4A3-206ENST00000487633 KCNJ4P48050 445 aa7.59□□□□□ -1.19
COL4A3-206ENST00000487633 NFIAQ12857 509 aa7.59□□□□□ -1.19
COL4A3-206ENST00000487633 ADGRE1Q14246 886 aa7.59□□□□□ -1.19
COL4A3-206ENST00000487633 NEUROD2Q15784 382 aa7.59□□□□□ -1.19
COL4A3-206ENST00000487633 CCDC85BQ15834 202 aaPredicted RBP7.59□□□□□ -1.19
COL4A3-206ENST00000487633 APOBEC3HQ6NTF7 200 aaKnown RBP7.59□□□□□ -1.19
COL4A3-206ENST00000487633 UBE3BQ7Z3V4 1068 aa7.59□□□□□ -1.19
COL4A3-206ENST00000487633 PRRT2Q7Z6L0 340 aaPredicted RBP7.59□□□□□ -1.19
COL4A3-206ENST00000487633 TDRD7Q8NHU6 1098 aaKnown RBP7.59□□□□□ -1.19
COL4A3-206ENST00000487633 BADQ92934 168 aa7.59□□□□□ -1.19
COL4A3-206ENST00000487633 SENP6Q9GZR1 1112 aaPredicted RBP7.59□□□□□ -1.19
COL4A3-206ENST00000487633 HYPKQ9NX55 129 aa7.59□□□□□ -1.19
COL4A3-206ENST00000487633 SERPINA10Q9UK55 444 aa7.59□□□□□ -1.19
COL4A3-206ENST00000487633 MAP3K2Q9Y2U5 619 aa7.59□□□□□ -1.19
COL4A3-206ENST00000487633 ATRNL1Q5VV63 1379 aa7.59□□□□□ -1.2
COL4A3-206ENST00000487633 ATAD5Q96QE3 1844 aa7.58□□□□□ -1.2
COL4A3-206ENST00000487633 H7C1W4 665 aa7.58□□□□□ -1.2
COL4A3-206ENST00000487633 PLIN1O60240 522 aa7.58□□□□□ -1.2
COL4A3-206ENST00000487633 CSF1RP07333 972 aa7.58□□□□□ -1.2
COL4A3-206ENST00000487633 PRKAR2AP13861 404 aaKnown RBP7.58□□□□□ -1.2
COL4A3-206ENST00000487633 TFF2Q03403 129 aa7.58□□□□□ -1.2
COL4A3-206ENST00000487633 CACNB2Q08289 660 aaPredicted RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms