RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 HSPA6P17066 643 aa23.76■■□□□ 1.39
SEC22A-208ENST00000487572 CYP7A1P22680 504 aa23.76■■□□□ 1.39
SEC22A-208ENST00000487572 APLP1P51693 650 aa23.76■■□□□ 1.39
SEC22A-208ENST00000487572 PI4K2BQ8TCG2 481 aa23.76■■□□□ 1.39
SEC22A-208ENST00000487572 CDCA5Q96FF9 252 aa23.76■■□□□ 1.39
SEC22A-208ENST00000487572 FAM163AQ96GL9 167 aaPredicted RBP23.76■■□□□ 1.39
SEC22A-208ENST00000487572 MYO5AQ9Y4I1 1855 aaKnown RBP23.76■■□□□ 1.39
SEC22A-208ENST00000487572 POLR2AP24928 1970 aaKnown RBP23.76■■□□□ 1.39
SEC22A-208ENST00000487572 CELF2O95319 508 aaKnown RBP23.75■■□□□ 1.39
SEC22A-208ENST00000487572 PDE1AP54750 535 aa23.75■■□□□ 1.39
SEC22A-208ENST00000487572 ADGRA1Q86SQ6 560 aa23.75■■□□□ 1.39
SEC22A-208ENST00000487572 NOL10Q9BSC4 688 aaKnown RBP23.75■■□□□ 1.39
SEC22A-208ENST00000487572 DEFB129Q9H1M3 183 aa23.75■■□□□ 1.39
SEC22A-208ENST00000487572 GPR75-ASB3A0A0A6YYF3 556 aa23.74■■□□□ 1.39
SEC22A-208ENST00000487572 TNFAIP1Q13829 316 aa23.74■■□□□ 1.39
SEC22A-208ENST00000487572 CCDC136Q96JN2 1154 aa23.74■■□□□ 1.39
SEC22A-208ENST00000487572 STAP2Q9UGK3 403 aa23.74■■□□□ 1.39
SEC22A-208ENST00000487572 DOCK2Q92608 1830 aa23.74■■□□□ 1.39
SEC22A-208ENST00000487572 PDE6AP16499 860 aa23.73■■□□□ 1.39
SEC22A-208ENST00000487572 RASA3Q14644 834 aa23.73■■□□□ 1.39
SEC22A-208ENST00000487572 SLC9C2Q5TAH2 1124 aa23.73■■□□□ 1.39
SEC22A-208ENST00000487572 AATFQ9NY61 560 aaKnown RBP eCLIP23.73■■□□□ 1.39
SEC22A-208ENST00000487572 TMEM88BA6NKF7 163 aa23.72■■□□□ 1.39
SEC22A-208ENST00000487572 IGSF3O75054 1194 aa23.72■■□□□ 1.39
SEC22A-208ENST00000487572 TNNI2P48788 182 aa23.72■■□□□ 1.39
SEC22A-208ENST00000487572 HTRA3P83110 453 aa23.72■■□□□ 1.39
SEC22A-208ENST00000487572 CST9Q5W186 159 aa23.72■■□□□ 1.39
SEC22A-208ENST00000487572 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.72■■□□□ 1.39
SEC22A-208ENST00000487572 NFIAQ12857 509 aa23.71■■□□□ 1.39
SEC22A-208ENST00000487572 PLEKHM2Q8IWE5 1019 aa23.71■■□□□ 1.39
SEC22A-208ENST00000487572 MIGA1Q8NAN2 632 aa23.71■■□□□ 1.39
SEC22A-208ENST00000487572 TMEM39BQ9GZU3 492 aa23.71■■□□□ 1.39
SEC22A-208ENST00000487572 PPP2R3BQ9Y5P8 575 aa23.71■■□□□ 1.39
SEC22A-208ENST00000487572 CNTNAP1P78357 1384 aa23.7■■□□□ 1.38
SEC22A-208ENST00000487572 ZNF532Q9HCE3 1301 aa23.7■■□□□ 1.38
SEC22A-208ENST00000487572 BAG3O95817 575 aa23.7■■□□□ 1.38
SEC22A-208ENST00000487572 PDE4AP27815 886 aa23.7■■□□□ 1.38
SEC22A-208ENST00000487572 TCP10Q12799 353 aa23.7■■□□□ 1.38
SEC22A-208ENST00000487572 CENPQQ7L2Z9 268 aaPredicted RBP23.7■■□□□ 1.38
SEC22A-208ENST00000487572 RHBDL3P58872 404 aa23.69■■□□□ 1.38
SEC22A-208ENST00000487572 DYNLL1P63167 89 aaKnown RBP23.69■■□□□ 1.38
SEC22A-208ENST00000487572 PICALMQ13492 652 aa23.69■■□□□ 1.38
SEC22A-208ENST00000487572 SLFNL1Q499Z3 407 aa23.69■■□□□ 1.38
SEC22A-208ENST00000487572 FKBP1CQ5VVH2 108 aa23.69■■□□□ 1.38
SEC22A-208ENST00000487572 KBTBD3Q8NAB2 608 aa23.69■■□□□ 1.38
SEC22A-208ENST00000487572 SH3RF3Q8TEJ3 882 aaPredicted RBP23.69■■□□□ 1.38
SEC22A-208ENST00000487572 ABT1Q9ULW3 272 aaKnown RBP23.69■■□□□ 1.38
SEC22A-208ENST00000487572 CHGBP05060 677 aa23.68■■□□□ 1.38
SEC22A-208ENST00000487572 NF2P35240 595 aa23.68■■□□□ 1.38
SEC22A-208ENST00000487572 CDAN1Q8IWY9 1227 aa23.68■■□□□ 1.38
SEC22A-208ENST00000487572 TEX11Q8IYF3 940 aa23.68■■□□□ 1.38
SEC22A-208ENST00000487572 CREBZFQ9NS37 354 aa23.68■■□□□ 1.38
SEC22A-208ENST00000487572 FAM198AQ9UFP1 575 aa23.68■■□□□ 1.38
SEC22A-208ENST00000487572 TRPM7Q96QT4 1865 aa23.68■■□□□ 1.38
SEC22A-208ENST00000487572 TCRBV5S4A2TA0A5A2 114 aa23.67■■□□□ 1.38
SEC22A-208ENST00000487572 WDHD1O75717 1129 aaPredicted RBP23.67■■□□□ 1.38
SEC22A-208ENST00000487572 ADD2P35612 726 aa23.67■■□□□ 1.38
SEC22A-208ENST00000487572 RGS3P49796 1198 aa23.67■■□□□ 1.38
SEC22A-208ENST00000487572 PRKG1Q13976 671 aa23.67■■□□□ 1.38
SEC22A-208ENST00000487572 NBPF12Q5TAG4 269 aaPredicted RBP23.67■■□□□ 1.38
SEC22A-208ENST00000487572 ZSCAN25Q6NSZ9 544 aa23.67■■□□□ 1.38
SEC22A-208ENST00000487572 TMED8Q6PL24 325 aaPredicted RBP23.67■■□□□ 1.38
SEC22A-208ENST00000487572 FAM83AQ86UY5 434 aa23.67■■□□□ 1.38
SEC22A-208ENST00000487572 FSD1Q9BTV5 496 aa23.67■■□□□ 1.38
SEC22A-208ENST00000487572 GBA2Q9HCG7 927 aaPredicted RBP23.67■■□□□ 1.38
SEC22A-208ENST00000487572 PLCG2P16885 1265 aa23.66■■□□□ 1.38
SEC22A-208ENST00000487572 PPP4CP60510 307 aa23.66■■□□□ 1.38
SEC22A-208ENST00000487572 TTLL12Q14166 644 aaPredicted RBP23.66■■□□□ 1.38
SEC22A-208ENST00000487572 IDI2Q9BXS1 227 aa23.66■■□□□ 1.38
SEC22A-208ENST00000487572 DDX4Q9NQI0 724 aaKnown RBP23.66■■□□□ 1.38
SEC22A-208ENST00000487572 RFX7Q2KHR2 1363 aa23.65■■□□□ 1.38
SEC22A-208ENST00000487572 MAGEB6P1A0A0J9YX57 407 aa23.65■■□□□ 1.38
SEC22A-208ENST00000487572 SUPT20HL1Q3ZLR7 823 aa23.65■■□□□ 1.38
SEC22A-208ENST00000487572 ZFPM1Q8IX07 1006 aa23.65■■□□□ 1.38
SEC22A-208ENST00000487572 C2orf69Q8N8R5 385 aa23.65■■□□□ 1.38
SEC22A-208ENST00000487572 FAM151AQ8WW52 585 aa23.65■■□□□ 1.38
SEC22A-208ENST00000487572 TEPSINQ96N21 525 aa23.65■■□□□ 1.38
SEC22A-208ENST00000487572 OSBPL3Q9H4L5 887 aa23.65■■□□□ 1.38
SEC22A-208ENST00000487572 TRIM6-TRIM34B2RNG4 842 aa23.64■■□□□ 1.37
SEC22A-208ENST00000487572 ERICH6BQ5W0A0 696 aa23.64■■□□□ 1.37
SEC22A-208ENST00000487572 MOB2Q70IA6 237 aa23.64■■□□□ 1.37
SEC22A-208ENST00000487572 FZD1Q9UP38 647 aa23.64■■□□□ 1.37
SEC22A-208ENST00000487572 SSC5DA1L4H1 1573 aa23.64■■□□□ 1.37
SEC22A-208ENST00000487572 RNF113AO15541 343 aaKnown RBP23.63■■□□□ 1.37
SEC22A-208ENST00000487572 ENTPD3O75355 529 aa23.63■■□□□ 1.37
SEC22A-208ENST00000487572 UBE3CQ15386 1083 aa23.63■■□□□ 1.37
SEC22A-208ENST00000487572 ZSCAN29Q8IWY8 852 aaPredicted RBP23.63■■□□□ 1.37
SEC22A-208ENST00000487572 TGFBRAP1Q8WUH2 860 aa23.63■■□□□ 1.37
SEC22A-208ENST00000487572 EVI5LQ96CN4 794 aa23.63■■□□□ 1.37
SEC22A-208ENST00000487572 RIOK1Q9BRS2 568 aaKnown RBP23.63■■□□□ 1.37
SEC22A-208ENST00000487572 PPP4R2Q9NY27 417 aa23.63■■□□□ 1.37
SEC22A-208ENST00000487572 TLL2Q9Y6L7 1015 aa23.63■■□□□ 1.37
SEC22A-208ENST00000487572 LRRFIP1Q32MZ4 808 aaKnown RBP23.62■■□□□ 1.37
SEC22A-208ENST00000487572 CERS3Q8IU89 383 aa23.62■■□□□ 1.37
SEC22A-208ENST00000487572 MAPKAPK5Q8IW41 473 aa23.62■■□□□ 1.37
SEC22A-208ENST00000487572 RILPL2Q969X0 211 aa23.62■■□□□ 1.37
SEC22A-208ENST00000487572 ARMT1Q9H993 441 aa23.62■■□□□ 1.37
SEC22A-208ENST00000487572 MYH7P12883 1935 aa23.61■■□□□ 1.37
SEC22A-208ENST00000487572 MBD4O95243 580 aa23.61■■□□□ 1.37
SEC22A-208ENST00000487572 HUNKP57058 714 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms