RNA–Protein interactions for RNA: ENST00000487428.1

PTPRE-209, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3

Gene PTPRE, Length 325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-209ENST00000487428 DCPSQ96C86 337 aaKnown RBP8.08□□□□□ -1.12
PTPRE-209ENST00000487428 PIH1D3Q9NQM4 214 aaKnown RBP8.08□□□□□ -1.12
PTPRE-209ENST00000487428 PPP4R2Q9NY27 417 aa8.08□□□□□ -1.12
PTPRE-209ENST00000487428 GGA3Q9NZ52 723 aa8.08□□□□□ -1.12
PTPRE-209ENST00000487428 LRP2BPQ9P2M1 347 aa8.08□□□□□ -1.12
PTPRE-209ENST00000487428 ABCF2Q9UG63 623 aa8.08□□□□□ -1.12
PTPRE-209ENST00000487428 APBB1O00213 710 aa8.07□□□□□ -1.12
PTPRE-209ENST00000487428 BAG3O95817 575 aa8.07□□□□□ -1.12
PTPRE-209ENST00000487428 POTEIP0CG38 1075 aa8.07□□□□□ -1.12
PTPRE-209ENST00000487428 POTEJP0CG39 1038 aa8.07□□□□□ -1.12
PTPRE-209ENST00000487428 ADD2P35612 726 aa8.07□□□□□ -1.12
PTPRE-209ENST00000487428 TNNI2P48788 182 aa8.07□□□□□ -1.12
PTPRE-209ENST00000487428 EAPPQ56P03 285 aaPredicted RBP8.07□□□□□ -1.12
PTPRE-209ENST00000487428 ANGEL2Q5VTE6 544 aaKnown RBP8.07□□□□□ -1.12
PTPRE-209ENST00000487428 NAA16Q6N069 864 aaPredicted RBP8.07□□□□□ -1.12
PTPRE-209ENST00000487428 KRT26Q7Z3Y9 468 aa8.07□□□□□ -1.12
PTPRE-209ENST00000487428 FBXW7Q969H0 707 aa8.07□□□□□ -1.12
PTPRE-209ENST00000487428 EVI5LQ96CN4 794 aa8.07□□□□□ -1.12
PTPRE-209ENST00000487428 HOOK2Q96ED9 719 aa8.07□□□□□ -1.12
PTPRE-209ENST00000487428 LNPKQ9C0E8 428 aa8.07□□□□□ -1.12
PTPRE-209ENST00000487428 ZNF70Q9UC06 446 aaPredicted RBP8.07□□□□□ -1.12
PTPRE-209ENST00000487428 PTPRFP10586 1907 aa8.07□□□□□ -1.12
PTPRE-209ENST00000487428 ATAD5Q96QE3 1844 aa8.06□□□□□ -1.12
PTPRE-209ENST00000487428 TBC1D12O60347 775 aa8.06□□□□□ -1.12
PTPRE-209ENST00000487428 WDHD1O75717 1129 aaPredicted RBP8.06□□□□□ -1.12
PTPRE-209ENST00000487428 PDE6AP16499 860 aa8.06□□□□□ -1.12
PTPRE-209ENST00000487428 APLP1P51693 650 aa8.06□□□□□ -1.12
PTPRE-209ENST00000487428 IRX6P78412 446 aaPredicted RBP8.06□□□□□ -1.12
PTPRE-209ENST00000487428 DIXDC1Q155Q3 683 aa8.06□□□□□ -1.12
PTPRE-209ENST00000487428 CDC42EP5Q6NZY7 148 aa8.06□□□□□ -1.12
PTPRE-209ENST00000487428 TBC1D9Q6ZT07 1266 aa8.06□□□□□ -1.12
PTPRE-209ENST00000487428 METTL16Q86W50 562 aaKnown RBP8.06□□□□□ -1.12
PTPRE-209ENST00000487428 FAM151AQ8WW52 585 aa8.06□□□□□ -1.12
PTPRE-209ENST00000487428 TEPSINQ96N21 525 aa8.06□□□□□ -1.12
PTPRE-209ENST00000487428 RIOK1Q9BRS2 568 aaKnown RBP8.06□□□□□ -1.12
PTPRE-209ENST00000487428 BOLA2Q9H3K6 86 aa8.06□□□□□ -1.12
PTPRE-209ENST00000487428 ANTXR1Q9H6X2 564 aa8.06□□□□□ -1.12
PTPRE-209ENST00000487428 SNRKQ9NRH2 765 aa8.06□□□□□ -1.12
PTPRE-209ENST00000487428 CREBZFQ9NS37 354 aa8.06□□□□□ -1.12
PTPRE-209ENST00000487428 TMOD2Q9NZR1 351 aa8.06□□□□□ -1.12
PTPRE-209ENST00000487428 MKRN1Q9UHC7 482 aaKnown RBP8.06□□□□□ -1.12
PTPRE-209ENST00000487428 JAG2Q9Y219 1238 aa8.06□□□□□ -1.12
PTPRE-209ENST00000487428 CNTNAP1P78357 1384 aa8.06□□□□□ -1.12
PTPRE-209ENST00000487428 LAMA4Q16363 1823 aa8.06□□□□□ -1.12
PTPRE-209ENST00000487428 PHIPQ8WWQ0 1821 aa8.06□□□□□ -1.12
PTPRE-209ENST00000487428 DOCK1Q14185 1865 aa8.05□□□□□ -1.12
PTPRE-209ENST00000487428 F8W031 263 aaPredicted RBP8.05□□□□□ -1.12
PTPRE-209ENST00000487428 GOLIM4O00461 696 aa8.05□□□□□ -1.12
PTPRE-209ENST00000487428 IDH1O75874 414 aaKnown RBP8.05□□□□□ -1.12
PTPRE-209ENST00000487428 HSPA6P17066 643 aa8.05□□□□□ -1.12
PTPRE-209ENST00000487428 SUPT20HL1Q3ZLR7 823 aa8.05□□□□□ -1.12
PTPRE-209ENST00000487428 SLC9C2Q5TAH2 1124 aa8.05□□□□□ -1.12
PTPRE-209ENST00000487428 MAP1SQ66K74 1059 aaPredicted RBP8.05□□□□□ -1.12
PTPRE-209ENST00000487428 GIMAP6Q6P9H5 292 aa8.05□□□□□ -1.12
PTPRE-209ENST00000487428 OTUD7AQ8TE49 926 aaPredicted RBP8.05□□□□□ -1.12
PTPRE-209ENST00000487428 APPBP2Q92624 585 aa8.05□□□□□ -1.12
PTPRE-209ENST00000487428 CCDC136Q96JN2 1154 aa8.05□□□□□ -1.12
PTPRE-209ENST00000487428 DEFB129Q9H1M3 183 aa8.05□□□□□ -1.12
PTPRE-209ENST00000487428 DHX36Q9H2U1 1008 aaKnown RBP8.05□□□□□ -1.12
PTPRE-209ENST00000487428 TDRD3Q9H7E2 651 aaKnown RBP8.05□□□□□ -1.12
PTPRE-209ENST00000487428 RAI14Q9P0K7 980 aa8.05□□□□□ -1.12
PTPRE-209ENST00000487428 CLEC11AQ9Y240 323 aa8.05□□□□□ -1.12
PTPRE-209ENST00000487428 SSC5DA1L4H1 1573 aa8.05□□□□□ -1.12
PTPRE-209ENST00000487428 ASTN2O75129 1339 aaPredicted RBP8.04□□□□□ -1.12
PTPRE-209ENST00000487428 GREB1LQ9C091 1923 aaPredicted RBP8.04□□□□□ -1.12
PTPRE-209ENST00000487428 TMEM88BA6NKF7 163 aa8.04□□□□□ -1.12
PTPRE-209ENST00000487428 HIP1O00291 1037 aa8.04□□□□□ -1.12
PTPRE-209ENST00000487428 RNF113AO15541 343 aaKnown RBP8.04□□□□□ -1.12
PTPRE-209ENST00000487428 CYP7A1P22680 504 aa8.04□□□□□ -1.12
PTPRE-209ENST00000487428 PDE4AP27815 886 aa8.04□□□□□ -1.12
PTPRE-209ENST00000487428 BTDP43251 543 aa8.04□□□□□ -1.12
PTPRE-209ENST00000487428 RBM5P52756 815 aaKnown RBP eCLIP8.04□□□□□ -1.12
PTPRE-209ENST00000487428 RASA3Q14644 834 aa8.04□□□□□ -1.12
PTPRE-209ENST00000487428 RBM26Q5T8P6 1007 aaKnown RBP8.04□□□□□ -1.12
PTPRE-209ENST00000487428 CST9Q5W186 159 aa8.04□□□□□ -1.12
PTPRE-209ENST00000487428 ADGRA1Q86SQ6 560 aa8.04□□□□□ -1.12
PTPRE-209ENST00000487428 MAGEB6Q8N7X4 407 aa8.04□□□□□ -1.12
PTPRE-209ENST00000487428 DNAJC2Q99543 621 aaKnown RBP8.04□□□□□ -1.12
PTPRE-209ENST00000487428 NOL10Q9BSC4 688 aaKnown RBP8.04□□□□□ -1.12
PTPRE-209ENST00000487428 GLIS2Q9BZE0 524 aaPredicted RBP8.04□□□□□ -1.12
PTPRE-209ENST00000487428 ATP8A2Q9NTI2 1148 aa8.04□□□□□ -1.12
PTPRE-209ENST00000487428 FAM198AQ9UFP1 575 aa8.04□□□□□ -1.12
PTPRE-209ENST00000487428 PCDHAC2Q9Y5I4 1007 aa8.04□□□□□ -1.12
PTPRE-209ENST00000487428 ZMYM6O95789 1325 aa8.03□□□□□ -1.12
PTPRE-209ENST00000487428 ZNF532Q9HCE3 1301 aa8.03□□□□□ -1.12
PTPRE-209ENST00000487428 RASSF10A6NK89 507 aa8.03□□□□□ -1.12
PTPRE-209ENST00000487428 GNAT2P19087 354 aa8.03□□□□□ -1.12
PTPRE-209ENST00000487428 NF2P35240 595 aa8.03□□□□□ -1.12
PTPRE-209ENST00000487428 NT5C2P49902 561 aa8.03□□□□□ -1.12
PTPRE-209ENST00000487428 BMP2KLQ5H9B9 411 aa8.03□□□□□ -1.12
PTPRE-209ENST00000487428 ZMYM1Q5SVZ6 1142 aa8.03□□□□□ -1.12
PTPRE-209ENST00000487428 LDLRAD1Q5T700 205 aa8.03□□□□□ -1.12
PTPRE-209ENST00000487428 TTC22Q5TAA0 569 aa8.03□□□□□ -1.12
PTPRE-209ENST00000487428 B4GALNT3Q6L9W6 998 aa8.03□□□□□ -1.12
PTPRE-209ENST00000487428 SAPCD2Q86UD0 394 aa8.03□□□□□ -1.12
PTPRE-209ENST00000487428 USP48Q86UV5 1035 aa8.03□□□□□ -1.12
PTPRE-209ENST00000487428 CDCA5Q96FF9 252 aa8.03□□□□□ -1.12
PTPRE-209ENST00000487428 EHD4Q9H223 541 aa8.03□□□□□ -1.12
PTPRE-209ENST00000487428 HELLSQ9NRZ9 838 aa8.03□□□□□ -1.12
PTPRE-209ENST00000487428 GINM1Q9NU53 330 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms