RNA–Protein interactions for RNA: ENST00000486964.5

POLR1A-208, Transcript of RNA polymerase I subunit A, humanhuman

TSL 5

Gene POLR1A, Length 1,427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-208ENST00000486964 LTBP1Q14766 1721 aa11.32□□□□□ -0.6
POLR1A-208ENST00000486964 ZMYM6O95789 1325 aa11.31□□□□□ -0.6
POLR1A-208ENST00000486964 SNED1Q8TER0 1413 aa11.31□□□□□ -0.6
POLR1A-208ENST00000486964 A0A0G2JLW4 131 aa11.31□□□□□ -0.6
POLR1A-208ENST00000486964 ZSCAN22P10073 491 aaPredicted RBP11.31□□□□□ -0.6
POLR1A-208ENST00000486964 STOX1Q6ZVD7 989 aa11.31□□□□□ -0.6
POLR1A-208ENST00000486964 ZNF804AQ7Z570 1209 aa11.31□□□□□ -0.6
POLR1A-208ENST00000486964 ADGRA1Q86SQ6 560 aa11.31□□□□□ -0.6
POLR1A-208ENST00000486964 WDR66Q8TBY9 1149 aa11.31□□□□□ -0.6
POLR1A-208ENST00000486964 CNKSR1Q969H4 720 aa11.31□□□□□ -0.6
POLR1A-208ENST00000486964 JAKMIP1Q96N16 626 aaKnown RBP11.31□□□□□ -0.6
POLR1A-208ENST00000486964 RIOK1Q9BRS2 568 aaKnown RBP11.31□□□□□ -0.6
POLR1A-208ENST00000486964 RTFDC1Q9BY42 306 aaPredicted RBP11.31□□□□□ -0.6
POLR1A-208ENST00000486964 SMC3Q9UQE7 1217 aa11.31□□□□□ -0.6
POLR1A-208ENST00000486964 CYP46A1Q9Y6A2 500 aa11.31□□□□□ -0.6
POLR1A-208ENST00000486964 LRRC37AA6NMS7 1700 aa11.31□□□□□ -0.6
POLR1A-208ENST00000486964 FAM205AQ6ZU69 1335 aa11.3□□□□□ -0.6
POLR1A-208ENST00000486964 C10orf71Q711Q0 1435 aa11.3□□□□□ -0.6
POLR1A-208ENST00000486964 GSG1L2A8MUP6 293 aa11.3□□□□□ -0.6
POLR1A-208ENST00000486964 PTMAP06454 111 aaKnown RBP11.3□□□□□ -0.6
POLR1A-208ENST00000486964 CPA1P15085 419 aa11.3□□□□□ -0.6
POLR1A-208ENST00000486964 CASTP20810 708 aaKnown RBP11.3□□□□□ -0.6
POLR1A-208ENST00000486964 KCNA3P22001 575 aa11.3□□□□□ -0.6
POLR1A-208ENST00000486964 RPS6KB1P23443 525 aa11.3□□□□□ -0.6
POLR1A-208ENST00000486964 EXOSC10Q01780 885 aaKnown RBP11.3□□□□□ -0.6
POLR1A-208ENST00000486964 TTLL5Q6EMB2 1281 aa11.3□□□□□ -0.6
POLR1A-208ENST00000486964 FBXL16Q8N461 479 aa11.3□□□□□ -0.6
POLR1A-208ENST00000486964 MPNDQ8N594 471 aa11.3□□□□□ -0.6
POLR1A-208ENST00000486964 GPR101Q96P66 508 aaPredicted RBP11.3□□□□□ -0.6
POLR1A-208ENST00000486964 PDRG1Q9NUG6 133 aa11.3□□□□□ -0.6
POLR1A-208ENST00000486964 DOCK2Q92608 1830 aa11.3□□□□□ -0.6
POLR1A-208ENST00000486964 E7EWF7 191 aa11.29□□□□□ -0.6
POLR1A-208ENST00000486964 TPM3P06753 285 aa11.29□□□□□ -0.6
POLR1A-208ENST00000486964 GNAT2P19087 354 aa11.29□□□□□ -0.6
POLR1A-208ENST00000486964 CYP7A1P22680 504 aa11.29□□□□□ -0.6
POLR1A-208ENST00000486964 CHRNA5P30532 468 aa11.29□□□□□ -0.6
POLR1A-208ENST00000486964 AK2P54819 239 aa11.29□□□□□ -0.6
POLR1A-208ENST00000486964 MECOMQ03112 1051 aa11.29□□□□□ -0.6
POLR1A-208ENST00000486964 KIAA2012Q0VF49 1180 aa11.29□□□□□ -0.6
POLR1A-208ENST00000486964 SPTY2D1Q68D10 685 aaPredicted RBP11.29□□□□□ -0.6
POLR1A-208ENST00000486964 CC2D2BQ6DHV5 1058 aa11.29□□□□□ -0.6
POLR1A-208ENST00000486964 OLFM4Q6UX06 510 aa11.29□□□□□ -0.6
POLR1A-208ENST00000486964 ZNF784Q8NCA9 323 aaPredicted RBP11.29□□□□□ -0.6
POLR1A-208ENST00000486964 ZNF622Q969S3 477 aaKnown RBP eCLIP11.29□□□□□ -0.63e-6■□□□□ 8.1
POLR1A-208ENST00000486964 NEK1Q96PY6 1258 aa11.29□□□□□ -0.6
POLR1A-208ENST00000486964 AGXT2Q9BYV1 514 aa11.29□□□□□ -0.6
POLR1A-208ENST00000486964 COA1Q9GZY4 146 aa11.29□□□□□ -0.6
POLR1A-208ENST00000486964 PDCL3Q9H2J4 239 aa11.29□□□□□ -0.6
POLR1A-208ENST00000486964 ABCF2Q9UG63 623 aa11.29□□□□□ -0.6
POLR1A-208ENST00000486964 DUOX1Q9NRD9 1551 aa11.28□□□□□ -0.6
POLR1A-208ENST00000486964 STX6O43752 255 aa11.28□□□□□ -0.6
POLR1A-208ENST00000486964 MBD4O95243 580 aa11.28□□□□□ -0.6
POLR1A-208ENST00000486964 HMGB1P09429 215 aaKnown RBP11.28□□□□□ -0.6
POLR1A-208ENST00000486964 PDCP20941 246 aa11.28□□□□□ -0.6
POLR1A-208ENST00000486964 ANKRD1Q15327 319 aa11.28□□□□□ -0.6
POLR1A-208ENST00000486964 BLOC1S2Q6QNY1 142 aa11.28□□□□□ -0.6
POLR1A-208ENST00000486964 IFNL3Q8IZI9 196 aa11.28□□□□□ -0.6
POLR1A-208ENST00000486964 LCORLQ8N3X6 602 aa11.28□□□□□ -0.6
POLR1A-208ENST00000486964 AIDAQ96BJ3 306 aa11.28□□□□□ -0.6
POLR1A-208ENST00000486964 FAM163AQ96GL9 167 aaPredicted RBP11.28□□□□□ -0.6
POLR1A-208ENST00000486964 SGIP1Q9BQI5 828 aa11.28□□□□□ -0.6
POLR1A-208ENST00000486964 NBPF3Q9H094 633 aa11.28□□□□□ -0.6
POLR1A-208ENST00000486964 ARMT1Q9H993 441 aa11.28□□□□□ -0.6
POLR1A-208ENST00000486964 EPB41L4AQ9HCS5 686 aaPredicted RBP11.28□□□□□ -0.6
POLR1A-208ENST00000486964 RAI14Q9P0K7 980 aa11.28□□□□□ -0.6
POLR1A-208ENST00000486964 COL11A2P13942 1736 aaPredicted RBP11.28□□□□□ -0.6
POLR1A-208ENST00000486964 C6orf229H3BNL8 230 aa11.27□□□□□ -0.6
POLR1A-208ENST00000486964 PRKAB2O43741 272 aa11.27□□□□□ -0.6
POLR1A-208ENST00000486964 F13A1P00488 732 aa11.27□□□□□ -0.6
POLR1A-208ENST00000486964 PRDX5P30044 214 aa11.27□□□□□ -0.6
POLR1A-208ENST00000486964 PPP4CP60510 307 aa11.27□□□□□ -0.6
POLR1A-208ENST00000486964 TOB2Q14106 344 aaPredicted RBP11.27□□□□□ -0.6
POLR1A-208ENST00000486964 GRIK5Q16478 980 aa11.27□□□□□ -0.6
POLR1A-208ENST00000486964 GRIPAP1Q4V328 841 aa11.27□□□□□ -0.6
POLR1A-208ENST00000486964 NAA16Q6N069 864 aaPredicted RBP11.27□□□□□ -0.6
POLR1A-208ENST00000486964 GIMAP6Q6P9H5 292 aa11.27□□□□□ -0.6
POLR1A-208ENST00000486964 SASS6Q6UVJ0 657 aa11.27□□□□□ -0.6
POLR1A-208ENST00000486964 DPP8Q6V1X1 898 aaPredicted RBP11.27□□□□□ -0.6
POLR1A-208ENST00000486964 DHX32Q7L7V1 743 aaKnown RBP11.27□□□□□ -0.6
POLR1A-208ENST00000486964 USP48Q86UV5 1035 aa11.27□□□□□ -0.6
POLR1A-208ENST00000486964 CACNA1SQ13698 1873 aa11.27□□□□□ -0.61
POLR1A-208ENST00000486964 MAGEB6P1A0A0J9YX57 407 aa11.26□□□□□ -0.61
POLR1A-208ENST00000486964 DYNC1I1O14576 645 aa11.26□□□□□ -0.61
POLR1A-208ENST00000486964 PTGER2P43116 358 aa11.26□□□□□ -0.61
POLR1A-208ENST00000486964 EVCP57679 992 aa11.26□□□□□ -0.61
POLR1A-208ENST00000486964 CHAF1AQ13111 956 aaPredicted RBP11.26□□□□□ -0.61
POLR1A-208ENST00000486964 IMMTQ16891 758 aaKnown RBP11.26□□□□□ -0.61
POLR1A-208ENST00000486964 FOXD4L5Q5VV16 416 aaPredicted RBP11.26□□□□□ -0.61
POLR1A-208ENST00000486964 NOL8Q76FK4 1167 aaKnown RBP11.26□□□□□ -0.61
POLR1A-208ENST00000486964 FOXD4L4Q8WXT5 416 aaPredicted RBP11.26□□□□□ -0.61
POLR1A-208ENST00000486964 ZC3H12CQ9C0D7 883 aaKnown RBP11.26□□□□□ -0.61
POLR1A-208ENST00000486964 MTFR1LQ9H019 292 aa11.26□□□□□ -0.61
POLR1A-208ENST00000486964 ANAPC4Q9UJX5 808 aa11.26□□□□□ -0.61
POLR1A-208ENST00000486964 SUGT1Q9Y2Z0 365 aa11.26□□□□□ -0.61
POLR1A-208ENST00000486964 ZNF213O14771 459 aa11.26□□□□□ -0.61
POLR1A-208ENST00000486964 LDHBP07195 334 aaKnown RBP11.26□□□□□ -0.61
POLR1A-208ENST00000486964 TGFB2P61812 414 aa11.26□□□□□ -0.61
POLR1A-208ENST00000486964 DYNLL1P63167 89 aaKnown RBP11.26□□□□□ -0.61
POLR1A-208ENST00000486964 MB21D2Q8IYB1 491 aaPredicted RBP11.26□□□□□ -0.61
POLR1A-208ENST00000486964 TBC1D22AQ8WUA7 517 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms