RNA–Protein interactions for RNA: ENST00000486596.5

NECTIN3-208, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 5

Gene NECTIN3, Length 732 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-208ENST00000486596 CRY2Q49AN0 593 aa7.97□□□□□ -1.13
NECTIN3-208ENST00000486596 PNMA8AQ86V59 439 aaPredicted RBP7.97□□□□□ -1.13
NECTIN3-208ENST00000486596 RTKN2Q8IZC4 609 aa7.97□□□□□ -1.13
NECTIN3-208ENST00000486596 GPC2Q8N158 579 aa7.97□□□□□ -1.13
NECTIN3-208ENST00000486596 WDR33Q9C0J8 1336 aaKnown RBP7.97□□□□□ -1.13
NECTIN3-208ENST00000486596 ALDH1B1P30837 517 aa7.96□□□□□ -1.14
NECTIN3-208ENST00000486596 SCNN1DP51172 638 aa7.96□□□□□ -1.14
NECTIN3-208ENST00000486596 RELBQ01201 579 aa7.96□□□□□ -1.14
NECTIN3-208ENST00000486596 PTSQ03393 145 aa7.96□□□□□ -1.14
NECTIN3-208ENST00000486596 CCER1Q8TC90 406 aaPredicted RBP7.96□□□□□ -1.14
NECTIN3-208ENST00000486596 NANOS1Q8WY41 292 aaKnown RBP7.96□□□□□ -1.14
NECTIN3-208ENST00000486596 ABHD8Q96I13 439 aa7.96□□□□□ -1.14
NECTIN3-208ENST00000486596 AGBL1Q96MI9 1066 aa7.96□□□□□ -1.14
NECTIN3-208ENST00000486596 PSMD1Q99460 953 aa7.96□□□□□ -1.14
NECTIN3-208ENST00000486596 PRM3Q9NNZ6 103 aa7.96□□□□□ -1.14
NECTIN3-208ENST00000486596 DDX21Q9NR30 783 aaKnown RBP eCLIP7.96□□□□□ -1.14
NECTIN3-208ENST00000486596 MIS18AQ9NYP9 233 aa7.96□□□□□ -1.14
NECTIN3-208ENST00000486596 ABT1Q9ULW3 272 aaKnown RBP7.96□□□□□ -1.14
NECTIN3-208ENST00000486596 GJA3Q9Y6H8 435 aa7.96□□□□□ -1.14
NECTIN3-208ENST00000486596 UBN2Q6ZU65 1347 aa7.96□□□□□ -1.14
NECTIN3-208ENST00000486596 RIC1Q4ADV7 1423 aa7.95□□□□□ -1.14
NECTIN3-208ENST00000486596 ESPNB1AK53 854 aa7.95□□□□□ -1.14
NECTIN3-208ENST00000486596 ERVH48-1M5A8F1 160 aa7.95□□□□□ -1.14
NECTIN3-208ENST00000486596 TRAF5O00463 557 aa7.95□□□□□ -1.14
NECTIN3-208ENST00000486596 EPS15P42566 896 aa7.95□□□□□ -1.14
NECTIN3-208ENST00000486596 NR1H3Q13133 447 aa7.95□□□□□ -1.14
NECTIN3-208ENST00000486596 NGEFQ8N5V2 710 aa7.95□□□□□ -1.14
NECTIN3-208ENST00000486596 JDP2Q8WYK2 163 aa7.95□□□□□ -1.14
NECTIN3-208ENST00000486596 RTF1Q92541 710 aaKnown RBP7.95□□□□□ -1.14
NECTIN3-208ENST00000486596 KDM3BQ7LBC6 1761 aa7.94□□□□□ -1.14
NECTIN3-208ENST00000486596 SLC35F4A4IF30 521 aa7.94□□□□□ -1.14
NECTIN3-208ENST00000486596 FIGNL2A6NMB9 653 aa7.94□□□□□ -1.14
NECTIN3-208ENST00000486596 U2AF1L5P0DN76 240 aaPredicted RBP7.94□□□□□ -1.14
NECTIN3-208ENST00000486596 GPTP24298 496 aa7.94□□□□□ -1.14
NECTIN3-208ENST00000486596 GTF2E1P29083 439 aaPredicted RBP7.94□□□□□ -1.14
NECTIN3-208ENST00000486596 U2AF1Q01081 240 aaKnown RBP eCLIP7.94□□□□□ -1.14
NECTIN3-208ENST00000486596 MAP2K1Q02750 393 aaPredicted RBP7.94□□□□□ -1.14
NECTIN3-208ENST00000486596 GRM1Q13255 1194 aa7.94□□□□□ -1.14
NECTIN3-208ENST00000486596 CYP4F22Q6NT55 531 aa7.94□□□□□ -1.14
NECTIN3-208ENST00000486596 TTLL7Q6ZT98 887 aa7.94□□□□□ -1.14
NECTIN3-208ENST00000486596 IBTKQ9P2D0 1353 aaPredicted RBP7.94□□□□□ -1.14
NECTIN3-208ENST00000486596 TCERG1O14776 1098 aaKnown RBP7.93□□□□□ -1.14
NECTIN3-208ENST00000486596 LMOD1P29536 600 aaPredicted RBP7.93□□□□□ -1.14
NECTIN3-208ENST00000486596 PPP2R1AP30153 589 aa7.93□□□□□ -1.14
NECTIN3-208ENST00000486596 EIF6P56537 245 aaKnown RBP7.93□□□□□ -1.14
NECTIN3-208ENST00000486596 SUSD4Q5VX71 490 aa7.93□□□□□ -1.14
NECTIN3-208ENST00000486596 CST9Q5W186 159 aa7.93□□□□□ -1.14
NECTIN3-208ENST00000486596 LARGE2Q8N3Y3 721 aa7.93□□□□□ -1.14
NECTIN3-208ENST00000486596 GPR161Q8N6U8 529 aaKnown RBP7.93□□□□□ -1.14
NECTIN3-208ENST00000486596 CAPNS2Q96L46 248 aa7.93□□□□□ -1.14
NECTIN3-208ENST00000486596 CFAP53Q96M91 514 aa7.93□□□□□ -1.14
NECTIN3-208ENST00000486596 ZNF395Q9H8N7 513 aaPredicted RBP7.93□□□□□ -1.14
NECTIN3-208ENST00000486596 CYLDQ9NQC7 956 aa7.93□□□□□ -1.14
NECTIN3-208ENST00000486596 MAP3K15Q6ZN16 1313 aa7.93□□□□□ -1.14
NECTIN3-208ENST00000486596 ERVV-1B6SEH8 477 aa7.92□□□□□ -1.14
NECTIN3-208ENST00000486596 HTATSF1O43719 755 aaKnown RBP7.92□□□□□ -1.14
NECTIN3-208ENST00000486596 LILRA1O75019 489 aa7.92□□□□□ -1.14
NECTIN3-208ENST00000486596 AOC2O75106 756 aa7.92□□□□□ -1.14
NECTIN3-208ENST00000486596 NTSR2O95665 410 aa7.92□□□□□ -1.14
NECTIN3-208ENST00000486596 MYL6BP14649 208 aa7.92□□□□□ -1.14
NECTIN3-208ENST00000486596 HOXA10P31260 410 aaPredicted RBP7.92□□□□□ -1.14
NECTIN3-208ENST00000486596 CTSOP43234 321 aaPredicted RBP7.92□□□□□ -1.14
NECTIN3-208ENST00000486596 KRT76Q01546 638 aa7.92□□□□□ -1.14
NECTIN3-208ENST00000486596 TAF7Q15545 349 aaPredicted RBP7.92□□□□□ -1.14
NECTIN3-208ENST00000486596 AOC3Q16853 763 aa7.92□□□□□ -1.14
NECTIN3-208ENST00000486596 CC2D2BQ6DHV5 1058 aa7.92□□□□□ -1.14
NECTIN3-208ENST00000486596 CCDC155Q8N6L0 562 aa7.92□□□□□ -1.14
NECTIN3-208ENST00000486596 RPGRQ92834 1020 aaKnown RBP7.92□□□□□ -1.14
NECTIN3-208ENST00000486596 GPR101Q96P66 508 aaPredicted RBP7.92□□□□□ -1.14
NECTIN3-208ENST00000486596 THUMPD2Q9BTF0 503 aaKnown RBP7.92□□□□□ -1.14
NECTIN3-208ENST00000486596 NYXQ9GZU5 481 aa7.92□□□□□ -1.14
NECTIN3-208ENST00000486596 POLMQ9NP87 494 aaPredicted RBP7.92□□□□□ -1.14
NECTIN3-208ENST00000486596 NUDCQ9Y266 331 aa7.92□□□□□ -1.14
NECTIN3-208ENST00000486596 CCDC85CA6NKD9 419 aa7.91□□□□□ -1.14
NECTIN3-208ENST00000486596 PPIP5K2O43314 1243 aa7.91□□□□□ -1.14
NECTIN3-208ENST00000486596 EIF4A1P60842 406 aaKnown RBP7.91□□□□□ -1.14
NECTIN3-208ENST00000486596 KIF6Q6ZMV9 814 aa7.91□□□□□ -1.14
NECTIN3-208ENST00000486596 USP50Q70EL3 339 aaPredicted RBP7.91□□□□□ -1.14
NECTIN3-208ENST00000486596 NIM1KQ8IY84 436 aa7.91□□□□□ -1.14
NECTIN3-208ENST00000486596 ZNF34Q8IZ26 560 aa7.91□□□□□ -1.14
NECTIN3-208ENST00000486596 KDF1Q8NAX2 398 aaPredicted RBP7.91□□□□□ -1.14
NECTIN3-208ENST00000486596 CRAMP1Q96RY5 1269 aa7.91□□□□□ -1.14
NECTIN3-208ENST00000486596 GPRC5DQ9NZD1 345 aa7.91□□□□□ -1.14
NECTIN3-208ENST00000486596 RRP7AQ9Y3A4 280 aaKnown RBP7.91□□□□□ -1.14
NECTIN3-208ENST00000486596 NUP98P52948 1817 aa7.91□□□□□ -1.14
NECTIN3-208ENST00000486596 ABCC4O15439 1325 aa7.9□□□□□ -1.14
NECTIN3-208ENST00000486596 ADH1AP07327 375 aa7.9□□□□□ -1.14
NECTIN3-208ENST00000486596 ADD1P35611 737 aaKnown RBP7.9□□□□□ -1.14
NECTIN3-208ENST00000486596 ABL2P42684 1182 aa7.9□□□□□ -1.14
NECTIN3-208ENST00000486596 ECE1P42892 770 aa7.9□□□□□ -1.14
NECTIN3-208ENST00000486596 LRP10Q7Z4F1 713 aa7.9□□□□□ -1.14
NECTIN3-208ENST00000486596 SAPCD2Q86UD0 394 aa7.9□□□□□ -1.14
NECTIN3-208ENST00000486596 RNF217Q8TC41 542 aa7.9□□□□□ -1.14
NECTIN3-208ENST00000486596 RBM17Q96I25 401 aaKnown RBP7.9□□□□□ -1.14
NECTIN3-208ENST00000486596 INSM2Q96T92 566 aaPredicted RBP7.9□□□□□ -1.14
NECTIN3-208ENST00000486596 GLIS2Q9BZE0 524 aaPredicted RBP7.9□□□□□ -1.14
NECTIN3-208ENST00000486596 ADARB2Q9NS39 739 aaKnown RBP7.9□□□□□ -1.14
NECTIN3-208ENST00000486596 DUOX1Q9NRD9 1551 aa7.89□□□□□ -1.15
NECTIN3-208ENST00000486596 SHTN1A0MZ66 631 aa7.89□□□□□ -1.15
NECTIN3-208ENST00000486596 GPR37L1O60883 481 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms