RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 EGFRP00533 1210 aa19.06■□□□□ 0.64
APOE-205ENST00000485628 EPS15P42566 896 aa19.06■□□□□ 0.64
APOE-205ENST00000485628 DYNLL1P63167 89 aaKnown RBP19.06■□□□□ 0.64
APOE-205ENST00000485628 CERS3Q8IU89 383 aa19.06■□□□□ 0.64
APOE-205ENST00000485628 RUFY2Q8WXA3 655 aa19.06■□□□□ 0.64
APOE-205ENST00000485628 MYOZ2Q9NPC6 264 aa19.06■□□□□ 0.64
APOE-205ENST00000485628 MKRN1Q9UHC7 482 aaKnown RBP19.06■□□□□ 0.64
APOE-205ENST00000485628 MAGEB6P1A0A0J9YX57 407 aa19.05■□□□□ 0.64
APOE-205ENST00000485628 WNT10BO00744 389 aa19.05■□□□□ 0.64
APOE-205ENST00000485628 GPAA1O43292 621 aa19.05■□□□□ 0.64
APOE-205ENST00000485628 BTDP43251 543 aa19.05■□□□□ 0.64
APOE-205ENST00000485628 CDC42EP5Q6NZY7 148 aa19.05■□□□□ 0.64
APOE-205ENST00000485628 LCORLQ8N3X6 602 aa19.05■□□□□ 0.64
APOE-205ENST00000485628 MIGA1Q8NAN2 632 aa19.05■□□□□ 0.64
APOE-205ENST00000485628 CCDC171Q6TFL3 1326 aa19.04■□□□□ 0.64
APOE-205ENST00000485628 NPM3O75607 178 aaKnown RBP19.04■□□□□ 0.64
APOE-205ENST00000485628 HIRAP54198 1017 aaPredicted RBP19.04■□□□□ 0.64
APOE-205ENST00000485628 CCDC129Q6ZRS4 1044 aa19.04■□□□□ 0.64
APOE-205ENST00000485628 AATFQ9NY61 560 aaKnown RBP eCLIP19.04■□□□□ 0.64
APOE-205ENST00000485628 H7C1D1 291 aa19.03■□□□□ 0.64
APOE-205ENST00000485628 EPB41L2O43491 1005 aaKnown RBP19.03■□□□□ 0.64
APOE-205ENST00000485628 MBD4O95243 580 aa19.03■□□□□ 0.64
APOE-205ENST00000485628 BAG3O95817 575 aa19.03■□□□□ 0.64
APOE-205ENST00000485628 DLGAP5Q15398 846 aa19.03■□□□□ 0.64
APOE-205ENST00000485628 SAMD7Q7Z3H4 446 aa19.03■□□□□ 0.64
APOE-205ENST00000485628 IDI2Q9BXS1 227 aa19.03■□□□□ 0.64
APOE-205ENST00000485628 LSG1Q9H089 658 aaKnown RBP19.03■□□□□ 0.64
APOE-205ENST00000485628 ARMT1Q9H993 441 aa19.03■□□□□ 0.64
APOE-205ENST00000485628 RPAP1Q9BWH6 1393 aaPredicted RBP19.03■□□□□ 0.64
APOE-205ENST00000485628 GSG1L2A8MUP6 293 aa19.02■□□□□ 0.64
APOE-205ENST00000485628 WDHD1O75717 1129 aaPredicted RBP19.02■□□□□ 0.64
APOE-205ENST00000485628 SEC24BO95487 1268 aa19.02■□□□□ 0.64
APOE-205ENST00000485628 PLCG2P16885 1265 aa19.02■□□□□ 0.64
APOE-205ENST00000485628 ALX1Q15699 326 aa19.02■□□□□ 0.64
APOE-205ENST00000485628 SPDYE2Q495Y8 402 aa19.02■□□□□ 0.64
APOE-205ENST00000485628 VPS53Q5VIR6 699 aa19.02■□□□□ 0.64
APOE-205ENST00000485628 CASC1Q6TDU7 716 aa19.02■□□□□ 0.64
APOE-205ENST00000485628 TRPM4Q8TD43 1214 aa19.02■□□□□ 0.64
APOE-205ENST00000485628 SH3RF3Q8TEJ3 882 aaPredicted RBP19.02■□□□□ 0.64
APOE-205ENST00000485628 AIDAQ96BJ3 306 aa19.02■□□□□ 0.64
APOE-205ENST00000485628 BACH2Q9BYV9 841 aa19.02■□□□□ 0.64
APOE-205ENST00000485628 ADARB2Q9NS39 739 aaKnown RBP19.02■□□□□ 0.64
APOE-205ENST00000485628 PGAP2Q9UHJ9 254 aa19.02■□□□□ 0.64
APOE-205ENST00000485628 DDX60LQ5H9U9 1706 aaKnown RBP19.01■□□□□ 0.63
APOE-205ENST00000485628 PATL2C9JE40 543 aaKnown RBP19.01■□□□□ 0.63
APOE-205ENST00000485628 HSPD1P10809 573 aaKnown RBP19.01■□□□□ 0.63
APOE-205ENST00000485628 KIF4BQ2VIQ3 1234 aa19.01■□□□□ 0.63
APOE-205ENST00000485628 NBPF9Q3BBW0 867 aa19.01■□□□□ 0.63
APOE-205ENST00000485628 FKBP1CQ5VVH2 108 aa19.01■□□□□ 0.63
APOE-205ENST00000485628 MAP4K1Q92918 833 aa19.01■□□□□ 0.63
APOE-205ENST00000485628 DSCC1Q9BVC3 393 aa19.01■□□□□ 0.63
APOE-205ENST00000485628 PRKAB2O43741 272 aa19■□□□□ 0.63
APOE-205ENST00000485628 GNAT2P19087 354 aa19■□□□□ 0.63
APOE-205ENST00000485628 MFAP1P55081 439 aaKnown RBP19■□□□□ 0.63
APOE-205ENST00000485628 PTH1RQ03431 593 aa19■□□□□ 0.63
APOE-205ENST00000485628 GIMAP6Q6P9H5 292 aa19■□□□□ 0.63
APOE-205ENST00000485628 TAF1DQ9H5J8 278 aaPredicted RBP19■□□□□ 0.63
APOE-205ENST00000485628 TDRD3Q9H7E2 651 aaKnown RBP19■□□□□ 0.63
APOE-205ENST00000485628 USP40Q9NVE5 1235 aa19■□□□□ 0.63
APOE-205ENST00000485628 ZNF70Q9UC06 446 aaPredicted RBP19■□□□□ 0.63
APOE-205ENST00000485628 HACL1Q9UJ83 578 aa19■□□□□ 0.63
APOE-205ENST00000485628 ZMYM6O95789 1325 aa19■□□□□ 0.63
APOE-205ENST00000485628 TBC1D10BQ4KMP7 808 aaPredicted RBP18.99■□□□□ 0.63
APOE-205ENST00000485628 USP50Q70EL3 339 aaPredicted RBP18.99■□□□□ 0.63
APOE-205ENST00000485628 EPB41L4AQ9HCS5 686 aaPredicted RBP18.99■□□□□ 0.63
APOE-205ENST00000485628 DCP1AQ9NPI6 582 aaPredicted RBP18.99■□□□□ 0.63
APOE-205ENST00000485628 DDX4Q9NQI0 724 aaKnown RBP18.99■□□□□ 0.63
APOE-205ENST00000485628 ATP8A2Q9NTI2 1148 aa18.99■□□□□ 0.63
APOE-205ENST00000485628 FAM198AQ9UFP1 575 aa18.99■□□□□ 0.63
APOE-205ENST00000485628 IQCA1LA6NCM1 817 aa18.98■□□□□ 0.63
APOE-205ENST00000485628 LMOD1P29536 600 aaPredicted RBP18.98■□□□□ 0.63
APOE-205ENST00000485628 RBM5P52756 815 aaKnown RBP eCLIP18.98■□□□□ 0.63
APOE-205ENST00000485628 NFIAQ12857 509 aa18.98■□□□□ 0.63
APOE-205ENST00000485628 USP26Q9BXU7 913 aa18.98■□□□□ 0.63
APOE-205ENST00000485628 CRNKL1Q9BZJ0 848 aaKnown RBP18.98■□□□□ 0.63
APOE-205ENST00000485628 POLR2AP24928 1970 aaKnown RBP18.98■□□□□ 0.63
APOE-205ENST00000485628 COL2A1P02458 1487 aaPredicted RBP18.97■□□□□ 0.63
APOE-205ENST00000485628 EPHX2P34913 555 aa18.97■□□□□ 0.63
APOE-205ENST00000485628 TEX11Q8IYF3 940 aa18.97■□□□□ 0.63
APOE-205ENST00000485628 ZC3H15Q8WU90 426 aaKnown RBP18.97■□□□□ 0.63
APOE-205ENST00000485628 SDR42E1Q8WUS8 393 aa18.97■□□□□ 0.63
APOE-205ENST00000485628 NOL10Q9BSC4 688 aaKnown RBP18.97■□□□□ 0.63
APOE-205ENST00000485628 SLC4A4Q9Y6R1 1079 aa18.97■□□□□ 0.63
APOE-205ENST00000485628 BAZ2AQ9UIF9 1905 aaKnown RBP18.97■□□□□ 0.63
APOE-205ENST00000485628 ASTN2O75129 1339 aaPredicted RBP18.97■□□□□ 0.63
APOE-205ENST00000485628 PITPNM2Q9BZ72 1349 aa18.97■□□□□ 0.63
APOE-205ENST00000485628 CNTNAP1P78357 1384 aa18.96■□□□□ 0.63
APOE-205ENST00000485628 ENTPD3O75355 529 aa18.96■□□□□ 0.63
APOE-205ENST00000485628 REC8O95072 547 aa18.96■□□□□ 0.63
APOE-205ENST00000485628 FGAP02671 866 aa18.96■□□□□ 0.63
APOE-205ENST00000485628 NECTIN1Q15223 517 aa18.96■□□□□ 0.63
APOE-205ENST00000485628 SBK1Q52WX2 424 aa18.96■□□□□ 0.63
APOE-205ENST00000485628 FAM83AQ86UY5 434 aa18.96■□□□□ 0.63
APOE-205ENST00000485628 IFNL3Q8IZI9 196 aa18.96■□□□□ 0.63
APOE-205ENST00000485628 TGFBRAP1Q8WUH2 860 aa18.96■□□□□ 0.63
APOE-205ENST00000485628 KCNB2Q92953 911 aa18.96■□□□□ 0.63
APOE-205ENST00000485628 FLT1P17948 1338 aa18.96■□□□□ 0.63
APOE-205ENST00000485628 EIF5BO60841 1220 aaKnown RBP18.95■□□□□ 0.62
APOE-205ENST00000485628 VEGFAP15692 232 aaPredicted RBP18.95■□□□□ 0.62
APOE-205ENST00000485628 RBM26Q5T8P6 1007 aaKnown RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms