RNA–Protein interactions for RNA: ENST00000485027.5

KPNA1-208, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-208ENST00000485027 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.4□□□□□ -1.23
KPNA1-208ENST00000485027 TNKS2Q9H2K2 1166 aa7.4□□□□□ -1.23
KPNA1-208ENST00000485027 FAM50BQ9Y247 325 aa7.4□□□□□ -1.23
KPNA1-208ENST00000485027 TTC37Q6PGP7 1564 aa7.4□□□□□ -1.23
KPNA1-208ENST00000485027 ABLIM3O94929 683 aa7.39□□□□□ -1.23
KPNA1-208ENST00000485027 RPN1P04843 607 aaKnown RBP7.39□□□□□ -1.23
KPNA1-208ENST00000485027 ATP6V1AP38606 617 aa7.39□□□□□ -1.23
KPNA1-208ENST00000485027 CRKP46108 304 aa7.39□□□□□ -1.23
KPNA1-208ENST00000485027 PABPC4Q13310 644 aaKnown RBP eCLIP7.39□□□□□ -1.23
KPNA1-208ENST00000485027 TBC1D10BQ4KMP7 808 aaPredicted RBP7.39□□□□□ -1.23
KPNA1-208ENST00000485027 SWT1Q5T5J6 900 aaKnown RBP7.39□□□□□ -1.23
KPNA1-208ENST00000485027 WWC2Q6AWC2 1192 aa7.39□□□□□ -1.23
KPNA1-208ENST00000485027 RASSF3Q86WH2 238 aa7.39□□□□□ -1.23
KPNA1-208ENST00000485027 USP33Q8TEY7 942 aa7.39□□□□□ -1.23
KPNA1-208ENST00000485027 ELAC2Q9BQ52 826 aaKnown RBP7.39□□□□□ -1.23
KPNA1-208ENST00000485027 RSRP1Q9BUV0 290 aa7.39□□□□□ -1.23
KPNA1-208ENST00000485027 OCEL1Q9H607 264 aa7.39□□□□□ -1.23
KPNA1-208ENST00000485027 RIC8AQ9NPQ8 531 aa7.39□□□□□ -1.23
KPNA1-208ENST00000485027 KMT5AQ9NQR1 393 aa7.39□□□□□ -1.23
KPNA1-208ENST00000485027 ACTR10Q9NZ32 417 aa7.39□□□□□ -1.23
KPNA1-208ENST00000485027 PCDHGB3Q9Y5G1 929 aa7.39□□□□□ -1.23
KPNA1-208ENST00000485027 GJB6O95452 261 aa7.38□□□□□ -1.23
KPNA1-208ENST00000485027 IGHDP01880 384 aa7.38□□□□□ -1.23
KPNA1-208ENST00000485027 ZSCAN20P17040 1043 aaPredicted RBP7.38□□□□□ -1.23
KPNA1-208ENST00000485027 SSRP1Q08945 709 aaKnown RBP7.38□□□□□ -1.23
KPNA1-208ENST00000485027 CHAF1AQ13111 956 aaPredicted RBP7.38□□□□□ -1.23
KPNA1-208ENST00000485027 CNGB1Q14028 1251 aaPredicted RBP7.38□□□□□ -1.23
KPNA1-208ENST00000485027 C8orf34Q49A92 452 aa7.38□□□□□ -1.23
KPNA1-208ENST00000485027 ESCO1Q5FWF5 840 aa7.38□□□□□ -1.23
KPNA1-208ENST00000485027 SPECC1Q5M775 1068 aa7.38□□□□□ -1.23
KPNA1-208ENST00000485027 NXPE4Q6UWF7 544 aa7.38□□□□□ -1.23
KPNA1-208ENST00000485027 MAATS1Q7Z4T9 603 aa7.38□□□□□ -1.23
KPNA1-208ENST00000485027 ZBTB46Q86UZ6 589 aa7.38□□□□□ -1.23
KPNA1-208ENST00000485027 PASD1Q8IV76 773 aa7.38□□□□□ -1.23
KPNA1-208ENST00000485027 ETFBKMTQ8IXQ9 262 aa7.38□□□□□ -1.23
KPNA1-208ENST00000485027 ABTB2Q8N961 1025 aa7.38□□□□□ -1.23
KPNA1-208ENST00000485027 RIN3Q8TB24 985 aa7.38□□□□□ -1.23
KPNA1-208ENST00000485027 PARD3BQ8TEW8 1205 aa7.38□□□□□ -1.23
KPNA1-208ENST00000485027 CHMP4CQ96CF2 233 aa7.38□□□□□ -1.23
KPNA1-208ENST00000485027 PGBD4Q96DM1 585 aa7.38□□□□□ -1.23
KPNA1-208ENST00000485027 TTC14Q96N46 770 aa7.38□□□□□ -1.23
KPNA1-208ENST00000485027 MYCBPQ99417 103 aaPredicted RBP7.38□□□□□ -1.23
KPNA1-208ENST00000485027 ANP32EQ9BTT0 268 aa7.38□□□□□ -1.23
KPNA1-208ENST00000485027 TARS2Q9BW92 718 aaKnown RBP7.38□□□□□ -1.23
KPNA1-208ENST00000485027 NT5C1AQ9BXI3 368 aa7.38□□□□□ -1.23
KPNA1-208ENST00000485027 ZMYM5Q9UJ78 669 aa7.38□□□□□ -1.23
KPNA1-208ENST00000485027 KIF14Q15058 1648 aa7.38□□□□□ -1.23
KPNA1-208ENST00000485027 FMN1Q68DA7 1419 aa7.38□□□□□ -1.23
KPNA1-208ENST00000485027 PHLDB1Q86UU1 1377 aa7.38□□□□□ -1.23
KPNA1-208ENST00000485027 ORC4O43929 436 aa7.38□□□□□ -1.23
KPNA1-208ENST00000485027 GBP2P32456 591 aaPredicted RBP7.38□□□□□ -1.23
KPNA1-208ENST00000485027 MAP3K10Q02779 954 aa7.38□□□□□ -1.23
KPNA1-208ENST00000485027 NEXNQ0ZGT2 675 aa7.38□□□□□ -1.23
KPNA1-208ENST00000485027 USP4Q13107 963 aa7.38□□□□□ -1.23
KPNA1-208ENST00000485027 STK3Q13188 491 aa7.38□□□□□ -1.23
KPNA1-208ENST00000485027 JAKMIP3Q5VZ66 844 aa7.38□□□□□ -1.23
KPNA1-208ENST00000485027 LARP1BQ659C4 914 aaKnown RBP7.38□□□□□ -1.23
KPNA1-208ENST00000485027 TOGARAM2Q6ZUX3 1019 aa7.38□□□□□ -1.23
KPNA1-208ENST00000485027 CHCHD4Q8N4Q1 142 aa7.38□□□□□ -1.23
KPNA1-208ENST00000485027 EIF2AK1Q9BQI3 630 aaKnown RBP7.38□□□□□ -1.23
KPNA1-208ENST00000485027 MYO5CQ9NQX4 1742 aa7.37□□□□□ -1.23
KPNA1-208ENST00000485027 MAGI3Q5TCQ9 1506 aa7.37□□□□□ -1.23
KPNA1-208ENST00000485027 RFPL1O75677 317 aa7.37□□□□□ -1.23
KPNA1-208ENST00000485027 MTA2O94776 668 aa7.37□□□□□ -1.23
KPNA1-208ENST00000485027 TYRP1P17643 537 aa7.37□□□□□ -1.23
KPNA1-208ENST00000485027 EPHA4P54764 986 aa7.37□□□□□ -1.23
KPNA1-208ENST00000485027 COL9A2Q14055 689 aaPredicted RBP7.37□□□□□ -1.23
KPNA1-208ENST00000485027 GALEQ14376 348 aa7.37□□□□□ -1.23
KPNA1-208ENST00000485027 COBLL1Q53SF7 1204 aa7.37□□□□□ -1.23
KPNA1-208ENST00000485027 TBCELQ5QJ74 424 aa7.37□□□□□ -1.23
KPNA1-208ENST00000485027 XRRA1Q6P2D8 792 aa7.37□□□□□ -1.23
KPNA1-208ENST00000485027 POTEEQ6S8J3 1075 aa7.37□□□□□ -1.23
KPNA1-208ENST00000485027 RNF19BQ6ZMZ0 732 aa7.37□□□□□ -1.23
KPNA1-208ENST00000485027 IFNL2Q8IZJ0 200 aa7.37□□□□□ -1.23
KPNA1-208ENST00000485027 TMEM87BQ96K49 555 aa7.37□□□□□ -1.23
KPNA1-208ENST00000485027 ARHGAP9Q9BRR9 750 aa7.37□□□□□ -1.23
KPNA1-208ENST00000485027 GGNBP2Q9H3C7 697 aa7.37□□□□□ -1.23
KPNA1-208ENST00000485027 SLC5A4Q9NY91 659 aa7.37□□□□□ -1.23
KPNA1-208ENST00000485027 E2F8A0AVK6 867 aa7.36□□□□□ -1.23
KPNA1-208ENST00000485027 B2RBV5 119 aa7.36□□□□□ -1.23
KPNA1-208ENST00000485027 TRIM6-TRIM34B2RNG4 842 aa7.36□□□□□ -1.23
KPNA1-208ENST00000485027 CPNE3O75131 537 aaKnown RBP7.36□□□□□ -1.23
KPNA1-208ENST00000485027 CLIP1P30622 1438 aa7.36□□□□□ -1.23
KPNA1-208ENST00000485027 ECE1P42892 770 aa7.36□□□□□ -1.23
KPNA1-208ENST00000485027 CASP7P55210 303 aa7.36□□□□□ -1.23
KPNA1-208ENST00000485027 NUCB1Q02818 461 aa7.36□□□□□ -1.23
KPNA1-208ENST00000485027 DUSP27Q5VZP5 1158 aa7.36□□□□□ -1.23
KPNA1-208ENST00000485027 PRPF40BQ6NWY9 871 aaKnown RBP7.36□□□□□ -1.23
KPNA1-208ENST00000485027 DZIP3Q86Y13 1208 aaKnown RBP7.36□□□□□ -1.23
KPNA1-208ENST00000485027 TRIM52Q96A61 297 aa7.36□□□□□ -1.23
KPNA1-208ENST00000485027 CCDC74AQ96AQ1 378 aa7.36□□□□□ -1.23
KPNA1-208ENST00000485027 TMEM74Q96NL1 305 aa7.36□□□□□ -1.23
KPNA1-208ENST00000485027 NUDT12Q9BQG2 462 aa7.36□□□□□ -1.23
KPNA1-208ENST00000485027 NOC4LQ9BVI4 516 aaKnown RBP7.36□□□□□ -1.23
KPNA1-208ENST00000485027 OSGEPQ9NPF4 335 aa7.36□□□□□ -1.23
KPNA1-208ENST00000485027 FAM13BQ9NYF5 915 aa7.36□□□□□ -1.23
KPNA1-208ENST00000485027 SLC27A5Q9Y2P5 690 aa7.36□□□□□ -1.23
KPNA1-208ENST00000485027 DGKBQ9Y6T7 804 aa7.36□□□□□ -1.23
KPNA1-208ENST00000485027 TEX14Q8IWB6 1497 aa7.36□□□□□ -1.23
KPNA1-208ENST00000485027 FYCO1Q9BQS8 1478 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms