RNA–Protein interactions for RNA: ENST00000484752.5

RFTN1-210, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-210ENST00000484752 ZDHHC15Q96MV8 337 aa13.83□□□□□ -0.2
RFTN1-210ENST00000484752 RIOK1Q9BRS2 568 aaKnown RBP13.83□□□□□ -0.2
RFTN1-210ENST00000484752 MXD3Q9BW11 206 aa13.83□□□□□ -0.2
RFTN1-210ENST00000484752 TMOD2Q9NZR1 351 aa13.83□□□□□ -0.2
RFTN1-210ENST00000484752 DAGLAQ9Y4D2 1042 aa13.83□□□□□ -0.2
RFTN1-210ENST00000484752 CHD4Q14839 1912 aa13.83□□□□□ -0.2
RFTN1-210ENST00000484752 PSME4Q14997 1843 aa13.83□□□□□ -0.2
RFTN1-210ENST00000484752 LMOD1P29536 600 aaPredicted RBP13.82□□□□□ -0.2
RFTN1-210ENST00000484752 USP5P45974 858 aa13.82□□□□□ -0.2
RFTN1-210ENST00000484752 DLGAP5Q15398 846 aa13.82□□□□□ -0.2
RFTN1-210ENST00000484752 GRIK5Q16478 980 aa13.82□□□□□ -0.2
RFTN1-210ENST00000484752 IMMTQ16891 758 aaKnown RBP13.82□□□□□ -0.2
RFTN1-210ENST00000484752 SLFNL1Q499Z3 407 aa13.82□□□□□ -0.2
RFTN1-210ENST00000484752 ADGRA1Q86SQ6 560 aa13.82□□□□□ -0.2
RFTN1-210ENST00000484752 MAP4K1Q92918 833 aa13.82□□□□□ -0.2
RFTN1-210ENST00000484752 NAPBQ9H115 298 aa13.82□□□□□ -0.2
RFTN1-210ENST00000484752 IL25Q9H293 177 aa13.82□□□□□ -0.2
RFTN1-210ENST00000484752 ATP8A2Q9NTI2 1148 aa13.82□□□□□ -0.2
RFTN1-210ENST00000484752 RBM8AQ9Y5S9 174 aaKnown RBP13.82□□□□□ -0.2
RFTN1-210ENST00000484752 ZMYM6O95789 1325 aa13.82□□□□□ -0.2
RFTN1-210ENST00000484752 H7C1D1 291 aa13.81□□□□□ -0.2
RFTN1-210ENST00000484752 RBM25P49756 843 aaKnown RBP13.81□□□□□ -0.2
RFTN1-210ENST00000484752 ANAPC15P60006 121 aa13.81□□□□□ -0.2
RFTN1-210ENST00000484752 KRT32Q14532 448 aa13.81□□□□□ -0.2
RFTN1-210ENST00000484752 CFAP100Q494V2 611 aa13.81□□□□□ -0.2
RFTN1-210ENST00000484752 TEX11Q8IYF3 940 aa13.81□□□□□ -0.2
RFTN1-210ENST00000484752 IL27Q8NEV9 243 aa13.81□□□□□ -0.2
RFTN1-210ENST00000484752 ZNF384Q8TF68 577 aa13.81□□□□□ -0.2
RFTN1-210ENST00000484752 TBC1D32Q96NH3 1257 aa13.81□□□□□ -0.2
RFTN1-210ENST00000484752 ZBTB12Q9Y330 459 aaPredicted RBP13.81□□□□□ -0.2
RFTN1-210ENST00000484752 SCN9AQ15858 1988 aa13.81□□□□□ -0.2
RFTN1-210ENST00000484752 SLC3A2P08195 630 aaKnown RBP13.8□□□□□ -0.2
RFTN1-210ENST00000484752 HSPA4P34932 840 aa13.8□□□□□ -0.2
RFTN1-210ENST00000484752 GMPSP49915 693 aaPredicted RBP13.8□□□□□ -0.2
RFTN1-210ENST00000484752 PRELPP51888 382 aa13.8□□□□□ -0.2
RFTN1-210ENST00000484752 DYNLL1P63167 89 aaKnown RBP13.8□□□□□ -0.2
RFTN1-210ENST00000484752 PTH1RQ03431 593 aa13.8□□□□□ -0.2
RFTN1-210ENST00000484752 ALX1Q15699 326 aa13.8□□□□□ -0.2
RFTN1-210ENST00000484752 GMLQ99445 158 aa13.8□□□□□ -0.2
RFTN1-210ENST00000484752 ARPP21Q9UBL0 812 aaPredicted RBP13.8□□□□□ -0.2
RFTN1-210ENST00000484752 ZNF541Q9H0D2 1346 aa13.8□□□□□ -0.2
RFTN1-210ENST00000484752 ZNF213O14771 459 aa13.79□□□□□ -0.2
RFTN1-210ENST00000484752 PSMA5P28066 241 aa13.79□□□□□ -0.2
RFTN1-210ENST00000484752 VPS53Q5VIR6 699 aa13.79□□□□□ -0.2
RFTN1-210ENST00000484752 MICALL2Q8IY33 904 aa13.79□□□□□ -0.2
RFTN1-210ENST00000484752 IFNL3Q8IZI9 196 aa13.79□□□□□ -0.2
RFTN1-210ENST00000484752 MTMR14Q8NCE2 650 aa13.79□□□□□ -0.2
RFTN1-210ENST00000484752 SH3RF3Q8TEJ3 882 aaPredicted RBP13.79□□□□□ -0.2
RFTN1-210ENST00000484752 USP40Q9NVE5 1235 aa13.79□□□□□ -0.2
RFTN1-210ENST00000484752 TIAM2Q8IVF5 1701 aa13.78□□□□□ -0.2
RFTN1-210ENST00000484752 MYO5AQ9Y4I1 1855 aaKnown RBP13.78□□□□□ -0.2
RFTN1-210ENST00000484752 DICER1Q9UPY3 1922 aaKnown RBP13.78□□□□□ -0.2
RFTN1-210ENST00000484752 SPDYE2BA6NHP3 402 aa13.78□□□□□ -0.2
RFTN1-210ENST00000484752 SPDYE6P0CI01 402 aa13.78□□□□□ -0.2
RFTN1-210ENST00000484752 ZNF280AP59817 542 aaPredicted RBP13.78□□□□□ -0.2
RFTN1-210ENST00000484752 CREB3L3Q68CJ9 461 aa13.78□□□□□ -0.2
RFTN1-210ENST00000484752 SDR42E1Q8WUS8 393 aa13.78□□□□□ -0.2
RFTN1-210ENST00000484752 RNF41Q9H4P4 317 aaPredicted RBP13.78□□□□□ -0.2
RFTN1-210ENST00000484752 MYOZ2Q9NPC6 264 aa13.78□□□□□ -0.2
RFTN1-210ENST00000484752 CNOT7Q9UIV1 285 aaKnown RBP13.78□□□□□ -0.2
RFTN1-210ENST00000484752 GSG1L2A8MUP6 293 aa13.77□□□□□ -0.21
RFTN1-210ENST00000484752 FGAP02671 866 aa13.77□□□□□ -0.21
RFTN1-210ENST00000484752 ANP32AP39687 249 aaKnown RBP13.77□□□□□ -0.21
RFTN1-210ENST00000484752 TRDNQ13061 729 aa13.77□□□□□ -0.21
RFTN1-210ENST00000484752 NECTIN1Q15223 517 aa13.77□□□□□ -0.21
RFTN1-210ENST00000484752 APOBEC3HQ6NTF7 200 aaKnown RBP13.77□□□□□ -0.21
RFTN1-210ENST00000484752 TGFBRAP1Q8WUH2 860 aa13.77□□□□□ -0.21
RFTN1-210ENST00000484752 ZNF287Q9HBT7 754 aa13.77□□□□□ -0.21
RFTN1-210ENST00000484752 DCP1AQ9NPI6 582 aaPredicted RBP13.77□□□□□ -0.21
RFTN1-210ENST00000484752 MYH2Q9UKX2 1941 aa13.77□□□□□ -0.21
RFTN1-210ENST00000484752 ZNF646O15015 1829 aaPredicted RBP13.76□□□□□ -0.21
RFTN1-210ENST00000484752 SLC27A2O14975 620 aa13.76□□□□□ -0.21
RFTN1-210ENST00000484752 PRKAB2O43741 272 aa13.76□□□□□ -0.21
RFTN1-210ENST00000484752 NPM3O75607 178 aaKnown RBP13.76□□□□□ -0.21
RFTN1-210ENST00000484752 POLR3DP05423 398 aaPredicted RBP13.76□□□□□ -0.21
RFTN1-210ENST00000484752 HLA-DOAP06340 250 aa13.76□□□□□ -0.21
RFTN1-210ENST00000484752 HMGB1P09429 215 aaKnown RBP13.76□□□□□ -0.21
RFTN1-210ENST00000484752 PCP11498 1178 aaKnown RBP13.76□□□□□ -0.21
RFTN1-210ENST00000484752 TNNI2P48788 182 aa13.76□□□□□ -0.21
RFTN1-210ENST00000484752 NT5C2P49902 561 aa13.76□□□□□ -0.21
RFTN1-210ENST00000484752 RHBDL3P58872 404 aa13.76□□□□□ -0.21
RFTN1-210ENST00000484752 TNFAIP1Q13829 316 aa13.76□□□□□ -0.21
RFTN1-210ENST00000484752 RABEP1Q15276 862 aa13.76□□□□□ -0.21
RFTN1-210ENST00000484752 KIF4BQ2VIQ3 1234 aa13.76□□□□□ -0.21
RFTN1-210ENST00000484752 CDC42EP5Q6NZY7 148 aa13.76□□□□□ -0.21
RFTN1-210ENST00000484752 MAPKAPK5Q8IW41 473 aa13.76□□□□□ -0.21
RFTN1-210ENST00000484752 MCM9Q9NXL9 1143 aa13.76□□□□□ -0.21
RFTN1-210ENST00000484752 GPRC5DQ9NZD1 345 aa13.76□□□□□ -0.21
RFTN1-210ENST00000484752 FLT1P17948 1338 aa13.75□□□□□ -0.21
RFTN1-210ENST00000484752 IQCA1LA6NCM1 817 aa13.75□□□□□ -0.21
RFTN1-210ENST00000484752 PICALMQ13492 652 aa13.75□□□□□ -0.21
RFTN1-210ENST00000484752 SBK1Q52WX2 424 aa13.75□□□□□ -0.21
RFTN1-210ENST00000484752 RALYLQ86SE5 291 aaKnown RBP13.75□□□□□ -0.21
RFTN1-210ENST00000484752 TTC6Q86TZ1 520 aa13.75□□□□□ -0.21
RFTN1-210ENST00000484752 KCNB2Q92953 911 aa13.75□□□□□ -0.21
RFTN1-210ENST00000484752 IDI2Q9BXS1 227 aa13.75□□□□□ -0.21
RFTN1-210ENST00000484752 DHX36Q9H2U1 1008 aaKnown RBP13.75□□□□□ -0.21
RFTN1-210ENST00000484752 CNNM2Q9H8M5 875 aa13.75□□□□□ -0.21
RFTN1-210ENST00000484752 EPB41L4AQ9HCS5 686 aaPredicted RBP13.75□□□□□ -0.21
RFTN1-210ENST00000484752 TSHZ2Q9NRE2 1034 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms