RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 RAD18Q9NS91 495 aa11.14□□□□□ -0.63
UBR3-210ENST00000484596 GIPC1O14908 333 aa11.13□□□□□ -0.63
UBR3-210ENST00000484596 AKAP4Q5JQC9 854 aa11.13□□□□□ -0.63
UBR3-210ENST00000484596 WWC3Q9ULE0 1092 aa11.13□□□□□ -0.63
UBR3-210ENST00000484596 SPG7Q9UQ90 795 aa11.13□□□□□ -0.63
UBR3-210ENST00000484596 ACTL7BQ9Y614 415 aa11.13□□□□□ -0.63
UBR3-210ENST00000484596 KIAA1324LA8MWY0 1029 aaPredicted RBP11.12□□□□□ -0.63
UBR3-210ENST00000484596 FCGRTP55899 365 aa11.12□□□□□ -0.63
UBR3-210ENST00000484596 AP3B2Q13367 1082 aa11.12□□□□□ -0.63
UBR3-210ENST00000484596 PAOXQ6QHF9 649 aa11.12□□□□□ -0.63
UBR3-210ENST00000484596 FBXL6Q8N531 539 aa11.12□□□□□ -0.63
UBR3-210ENST00000484596 BCO2Q9BYV7 579 aa11.12□□□□□ -0.63
UBR3-210ENST00000484596 GRIK1P39086 918 aa11.11□□□□□ -0.63
UBR3-210ENST00000484596 RBM25P49756 843 aaKnown RBP11.11□□□□□ -0.63
UBR3-210ENST00000484596 PDE3AQ14432 1141 aa11.11□□□□□ -0.63
UBR3-210ENST00000484596 INTS5Q6P9B9 1019 aaKnown RBP11.11□□□□□ -0.63
UBR3-210ENST00000484596 DTHD1Q6ZMT9 781 aa11.11□□□□□ -0.63
UBR3-210ENST00000484596 DYMQ7RTS9 669 aa11.11□□□□□ -0.63
UBR3-210ENST00000484596 SHISA5Q8N114 240 aa11.11□□□□□ -0.63
UBR3-210ENST00000484596 EZH1Q92800 747 aaPredicted RBP11.11□□□□□ -0.63
UBR3-210ENST00000484596 DUSP9Q99956 384 aaKnown RBP11.11□□□□□ -0.63
UBR3-210ENST00000484596 PPP4R2Q9NY27 417 aa11.11□□□□□ -0.63
UBR3-210ENST00000484596 PARP2Q9UGN5 583 aa11.11□□□□□ -0.63
UBR3-210ENST00000484596 F13BP05160 661 aa11.1□□□□□ -0.63
UBR3-210ENST00000484596 GNA15P30679 374 aa11.1□□□□□ -0.63
UBR3-210ENST00000484596 TAGLNQ01995 201 aaKnown RBP11.1□□□□□ -0.63
UBR3-210ENST00000484596 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.1□□□□□ -0.63
UBR3-210ENST00000484596 AOC2O75106 756 aa11.09□□□□□ -0.63
UBR3-210ENST00000484596 DAB2P98082 770 aa11.09□□□□□ -0.63
UBR3-210ENST00000484596 PSMD2Q13200 908 aa11.09□□□□□ -0.63
UBR3-210ENST00000484596 WDR18Q9BV38 432 aa11.09□□□□□ -0.63
UBR3-210ENST00000484596 YIPF2Q9BWQ6 316 aa11.09□□□□□ -0.63
UBR3-210ENST00000484596 SRCIN1Q9C0H9 1055 aa11.09□□□□□ -0.63
UBR3-210ENST00000484596 MRS2Q9HD23 443 aa11.09□□□□□ -0.63
UBR3-210ENST00000484596 FAM105AQ9NUU6 356 aa11.09□□□□□ -0.63
UBR3-210ENST00000484596 AP4E1Q9UPM8 1137 aa11.09□□□□□ -0.63
UBR3-210ENST00000484596 NFICP08651 508 aa11.08□□□□□ -0.64
UBR3-210ENST00000484596 NXPE4Q6UWF7 544 aa11.08□□□□□ -0.64
UBR3-210ENST00000484596 TMC4Q7Z404 712 aa11.08□□□□□ -0.64
UBR3-210ENST00000484596 SETDB2Q96T68 719 aa11.08□□□□□ -0.64
UBR3-210ENST00000484596 ZC3H12CQ9C0D7 883 aaKnown RBP11.08□□□□□ -0.64
UBR3-210ENST00000484596 ATG3Q9NT62 314 aa11.08□□□□□ -0.64
UBR3-210ENST00000484596 SPINK2P20155 84 aa11.07□□□□□ -0.64
UBR3-210ENST00000484596 RAB6AP20340 208 aa11.07□□□□□ -0.64
UBR3-210ENST00000484596 HOXA10P31260 410 aaPredicted RBP11.07□□□□□ -0.64
UBR3-210ENST00000484596 ADMP35318 185 aa11.07□□□□□ -0.64
UBR3-210ENST00000484596 GIMAP7Q8NHV1 300 aa11.07□□□□□ -0.64
UBR3-210ENST00000484596 CCDC86Q9H6F5 360 aaKnown RBP11.07□□□□□ -0.64
UBR3-210ENST00000484596 PIM2Q9P1W9 311 aa11.07□□□□□ -0.64
UBR3-210ENST00000484596 PRKAG2Q9UGJ0 569 aa11.07□□□□□ -0.64
UBR3-210ENST00000484596 PPP1R9AQ9ULJ8 1098 aa11.07□□□□□ -0.64
UBR3-210ENST00000484596 E9PSI1 815 aa11.06□□□□□ -0.64
UBR3-210ENST00000484596 SORBS3O60504 671 aa11.06□□□□□ -0.64
UBR3-210ENST00000484596 XRCC5P13010 732 aaKnown RBP11.06□□□□□ -0.64
UBR3-210ENST00000484596 LIG1P18858 919 aa11.06□□□□□ -0.64
UBR3-210ENST00000484596 ASPAP45381 313 aa11.06□□□□□ -0.64
UBR3-210ENST00000484596 MRRFQ96E11 262 aaKnown RBP11.06□□□□□ -0.64
UBR3-210ENST00000484596 WDR89Q96FK6 387 aaPredicted RBP11.06□□□□□ -0.64
UBR3-210ENST00000484596 SEMA6CQ9H3T2 930 aa11.06□□□□□ -0.64
UBR3-210ENST00000484596 GSX1Q9H4S2 264 aaPredicted RBP11.06□□□□□ -0.64
UBR3-210ENST00000484596 ACSS3Q9H6R3 686 aa11.06□□□□□ -0.64
UBR3-210ENST00000484596 TMEM39AQ9NV64 488 aa11.06□□□□□ -0.64
UBR3-210ENST00000484596 GPN3Q9UHW5 284 aaPredicted RBP11.06□□□□□ -0.64
UBR3-210ENST00000484596 AK5Q9Y6K8 562 aa11.06□□□□□ -0.64
UBR3-210ENST00000484596 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.05□□□□□ -0.64
UBR3-210ENST00000484596 ADAMTS4O75173 837 aa11.05□□□□□ -0.64
UBR3-210ENST00000484596 VAMP1P23763 118 aa11.05□□□□□ -0.64
UBR3-210ENST00000484596 ZAR1Q86SH2 424 aa11.05□□□□□ -0.64
UBR3-210ENST00000484596 DTX1Q86Y01 620 aa11.05□□□□□ -0.64
UBR3-210ENST00000484596 TBC1D32Q96NH3 1257 aa11.05□□□□□ -0.64
UBR3-210ENST00000484596 OSBPL1AQ9BXW6 950 aa11.05□□□□□ -0.64
UBR3-210ENST00000484596 AKAP2Q9Y2D5 859 aa11.05□□□□□ -0.64
UBR3-210ENST00000484596 LEMD3Q9Y2U8 911 aa11.05□□□□□ -0.64
UBR3-210ENST00000484596 SYNGAP1Q96PV0 1343 aa11.05□□□□□ -0.64
UBR3-210ENST00000484596 ZNF862O60290 1169 aa11.04□□□□□ -0.64
UBR3-210ENST00000484596 EIF4BP23588 611 aaKnown RBP11.04□□□□□ -0.64
UBR3-210ENST00000484596 PPP2R3AQ06190 1150 aa11.04□□□□□ -0.64
UBR3-210ENST00000484596 MAP7Q14244 749 aa11.04□□□□□ -0.64
UBR3-210ENST00000484596 GSTP1P09211 210 aaKnown RBP11.03□□□□□ -0.64
UBR3-210ENST00000484596 GATA6Q92908 595 aa11.03□□□□□ -0.64
UBR3-210ENST00000484596 ZNF428Q96B54 188 aa11.03□□□□□ -0.64
UBR3-210ENST00000484596 PSMG3-AS1Q96PY0 264 aa11.03□□□□□ -0.64
UBR3-210ENST00000484596 KRTAP4-8Q9BYQ9 185 aa11.03□□□□□ -0.64
UBR3-210ENST00000484596 C12orf49Q9H741 205 aa11.03□□□□□ -0.64
UBR3-210ENST00000484596 PDZD3Q86UT5 571 aa11.02□□□□□ -0.65
UBR3-210ENST00000484596 FAM8A1Q9UBU6 413 aa11.02□□□□□ -0.65
UBR3-210ENST00000484596 UNCXA6NJT0 531 aa11.01□□□□□ -0.65
UBR3-210ENST00000484596 FAM170BA6NMN3 283 aa11.01□□□□□ -0.65
UBR3-210ENST00000484596 TMPRSS2O15393 492 aa11.01□□□□□ -0.65
UBR3-210ENST00000484596 CPSF6Q16630 551 aaKnown RBP eCLIP11.01□□□□□ -0.65
UBR3-210ENST00000484596 C3orf58Q8NDZ4 430 aa11.01□□□□□ -0.65
UBR3-210ENST00000484596 STK35Q8TDR2 534 aa11.01□□□□□ -0.65
UBR3-210ENST00000484596 KRT82Q9NSB4 513 aa11.01□□□□□ -0.65
UBR3-210ENST00000484596 CRIM1Q9NZV1 1036 aa11.01□□□□□ -0.65
UBR3-210ENST00000484596 DYNC1LI2O43237 492 aaPredicted RBP11□□□□□ -0.65
UBR3-210ENST00000484596 SLFN14P0C7P3 912 aa11□□□□□ -0.65
UBR3-210ENST00000484596 FOSL1P15407 271 aa11□□□□□ -0.65
UBR3-210ENST00000484596 GP2P55259 537 aaKnown RBP11□□□□□ -0.65
UBR3-210ENST00000484596 MRPL58Q14197 206 aaKnown RBP11□□□□□ -0.65
UBR3-210ENST00000484596 SEZ6L2Q6UXD5 910 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms