RNA–Protein interactions for RNA: ENST00000483882.1

NR1H3-222, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-222ENST00000483882 APBB1O00213 710 aa18.34■□□□□ 0.53
NR1H3-222ENST00000483882 IGF2BP3O00425 579 aaKnown RBP eCLIP18.34■□□□□ 0.53
NR1H3-222ENST00000483882 TNNI2P48788 182 aa18.34■□□□□ 0.53
NR1H3-222ENST00000483882 HSP90AB4PQ58FF6 505 aa18.34■□□□□ 0.53
NR1H3-222ENST00000483882 TNNI3KQ59H18 835 aa18.34■□□□□ 0.53
NR1H3-222ENST00000483882 FBXO46Q6PJ61 603 aaPredicted RBP18.34■□□□□ 0.53
NR1H3-222ENST00000483882 TBC1D22AQ8WUA7 517 aa18.34■□□□□ 0.53
NR1H3-222ENST00000483882 EAF2Q96CJ1 260 aaPredicted RBP18.34■□□□□ 0.53
NR1H3-222ENST00000483882 ELP3Q9H9T3 547 aa18.34■□□□□ 0.53
NR1H3-222ENST00000483882 IL1RAPL2Q9NP60 686 aa18.34■□□□□ 0.53
NR1H3-222ENST00000483882 GPR108Q9NPR9 543 aa18.34■□□□□ 0.53
NR1H3-222ENST00000483882 FPGT-TNNI3KV9GXZ4 949 aa18.34■□□□□ 0.53
NR1H3-222ENST00000483882 ARAP2Q8WZ64 1704 aa18.33■□□□□ 0.52
NR1H3-222ENST00000483882 SMARCA5O60264 1052 aaPredicted RBP18.33■□□□□ 0.52
NR1H3-222ENST00000483882 RAB11FIP3O75154 756 aa18.33■□□□□ 0.52
NR1H3-222ENST00000483882 IFIT1P09914 478 aaKnown RBP18.33■□□□□ 0.52
NR1H3-222ENST00000483882 SLC5A1P13866 664 aa18.33■□□□□ 0.52
NR1H3-222ENST00000483882 GJA5P36382 358 aa18.33■□□□□ 0.52
NR1H3-222ENST00000483882 BCAMP50895 628 aa18.33■□□□□ 0.52
NR1H3-222ENST00000483882 CDAN1Q8IWY9 1227 aa18.33■□□□□ 0.52
NR1H3-222ENST00000483882 TMEM39BQ9GZU3 492 aa18.33■□□□□ 0.52
NR1H3-222ENST00000483882 OTUD7BQ6GQQ9 843 aa18.32■□□□□ 0.52
NR1H3-222ENST00000483882 ERC1Q8IUD2 1116 aa18.32■□□□□ 0.52
NR1H3-222ENST00000483882 KIF1BPQ96EK5 621 aa18.32■□□□□ 0.52
NR1H3-222ENST00000483882 XAGE2Q96GT9 111 aa18.32■□□□□ 0.52
NR1H3-222ENST00000483882 TEPSINQ96N21 525 aa18.32■□□□□ 0.52
NR1H3-222ENST00000483882 TLR7Q9NYK1 1049 aaKnown RBP18.32■□□□□ 0.52
NR1H3-222ENST00000483882 AKAP2Q9Y2D5 859 aa18.32■□□□□ 0.52
NR1H3-222ENST00000483882 TEKT1Q969V4 418 aa18.31■□□□□ 0.52
NR1H3-222ENST00000483882 OPTNQ96CV9 577 aa18.31■□□□□ 0.52
NR1H3-222ENST00000483882 DBNDD2Q9BQY9 259 aa18.31■□□□□ 0.52
NR1H3-222ENST00000483882 TRIM17Q9Y577 477 aa18.31■□□□□ 0.52
NR1H3-222ENST00000483882 PHKA1P46020 1223 aa18.3■□□□□ 0.52
NR1H3-222ENST00000483882 CACNB3P54284 484 aa18.3■□□□□ 0.52
NR1H3-222ENST00000483882 HDLBPQ00341 1268 aaKnown RBP18.3■□□□□ 0.52
NR1H3-222ENST00000483882 SMC5Q8IY18 1101 aa18.3■□□□□ 0.52
NR1H3-222ENST00000483882 NEUROD6Q96NK8 337 aa18.3■□□□□ 0.52
NR1H3-222ENST00000483882 CCDC8Q9H0W5 538 aaPredicted RBP18.3■□□□□ 0.52
NR1H3-222ENST00000483882 RWDD1Q9H446 243 aaPredicted RBP18.3■□□□□ 0.52
NR1H3-222ENST00000483882 TMOD2Q9NZR1 351 aa18.3■□□□□ 0.52
NR1H3-222ENST00000483882 DBNLQ9UJU6 430 aaKnown RBP18.3■□□□□ 0.52
NR1H3-222ENST00000483882 MAP3K9P80192 1104 aa18.29■□□□□ 0.52
NR1H3-222ENST00000483882 CRHR2Q13324 411 aa18.29■□□□□ 0.52
NR1H3-222ENST00000483882 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.29■□□□□ 0.52
NR1H3-222ENST00000483882 MAST3O60307 1309 aa18.28■□□□□ 0.52
NR1H3-222ENST00000483882 VGLL4Q14135 290 aa18.28■□□□□ 0.52
NR1H3-222ENST00000483882 CCDC102BQ68D86 513 aa18.28■□□□□ 0.52
NR1H3-222ENST00000483882 AACSQ86V21 672 aa18.28■□□□□ 0.52
NR1H3-222ENST00000483882 CNKSR2Q8WXI2 1034 aa18.28■□□□□ 0.52
NR1H3-222ENST00000483882 ERO1AQ96HE7 468 aa18.28■□□□□ 0.52
NR1H3-222ENST00000483882 PTPN18Q99952 460 aa18.28■□□□□ 0.52
NR1H3-222ENST00000483882 LRRCC1Q9C099 1032 aa18.28■□□□□ 0.52
NR1H3-222ENST00000483882 CSADQ9Y600 493 aa18.28■□□□□ 0.52
NR1H3-222ENST00000483882 OTOFQ9HC10 1997 aa18.28■□□□□ 0.52
NR1H3-222ENST00000483882 TESPA1A2RU30 521 aaPredicted RBP18.27■□□□□ 0.52
NR1H3-222ENST00000483882 OTOP1Q7RTM1 612 aa18.27■□□□□ 0.52
NR1H3-222ENST00000483882 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.27■□□□□ 0.52
NR1H3-222ENST00000483882 CD99L2Q8TCZ2 262 aa18.27■□□□□ 0.52
NR1H3-222ENST00000483882 GCC1Q96CN9 775 aa18.27■□□□□ 0.52
NR1H3-222ENST00000483882 ZDHHC15Q96MV8 337 aa18.27■□□□□ 0.52
NR1H3-222ENST00000483882 CCL15-CCL14A0A0B4J2E2 113 aa18.26■□□□□ 0.51
NR1H3-222ENST00000483882 SLC34A2O95436 690 aa18.26■□□□□ 0.51
NR1H3-222ENST00000483882 NEFLP07196 543 aa18.26■□□□□ 0.51
NR1H3-222ENST00000483882 CCL15Q16663 113 aa18.26■□□□□ 0.51
NR1H3-222ENST00000483882 OTUD5Q96G74 571 aa18.26■□□□□ 0.51
NR1H3-222ENST00000483882 SUGT1Q9Y2Z0 365 aa18.26■□□□□ 0.51
NR1H3-222ENST00000483882 LAMB1P07942 1786 aa18.25■□□□□ 0.51
NR1H3-222ENST00000483882 ZBTB22O15209 634 aa18.25■□□□□ 0.51
NR1H3-222ENST00000483882 GTF2A2P52657 109 aa18.25■□□□□ 0.51
NR1H3-222ENST00000483882 APOBEC3HQ6NTF7 200 aaKnown RBP18.25■□□□□ 0.51
NR1H3-222ENST00000483882 CLASRPQ8N2M8 674 aaKnown RBP18.25■□□□□ 0.51
NR1H3-222ENST00000483882 WDR66Q8TBY9 1149 aa18.25■□□□□ 0.51
NR1H3-222ENST00000483882 BRI3BPQ8WY22 251 aa18.25■□□□□ 0.51
NR1H3-222ENST00000483882 MS4A4AQ96JQ5 239 aa18.25■□□□□ 0.51
NR1H3-222ENST00000483882 MRIQ9BWK5 157 aa18.25■□□□□ 0.51
NR1H3-222ENST00000483882 BCL11AQ9H165 835 aa18.25■□□□□ 0.51
NR1H3-222ENST00000483882 SP3Q02447 781 aa18.24■□□□□ 0.51
NR1H3-222ENST00000483882 ANKRD45Q5TZF3 282 aa18.24■□□□□ 0.51
NR1H3-222ENST00000483882 HHIPL2Q6UWX4 724 aa18.24■□□□□ 0.51
NR1H3-222ENST00000483882 FAM83AQ86UY5 434 aa18.24■□□□□ 0.51
NR1H3-222ENST00000483882 OTUD7AQ8TE49 926 aaPredicted RBP18.24■□□□□ 0.51
NR1H3-222ENST00000483882 WRNIP1Q96S55 665 aa18.24■□□□□ 0.51
NR1H3-222ENST00000483882 EFCC1Q9HA90 598 aa18.24■□□□□ 0.51
NR1H3-222ENST00000483882 ARID4AP29374 1257 aaPredicted RBP18.23■□□□□ 0.51
NR1H3-222ENST00000483882 RASGRF1Q13972 1273 aa18.23■□□□□ 0.51
NR1H3-222ENST00000483882 TAF1CQ15572 869 aaPredicted RBP18.23■□□□□ 0.51
NR1H3-222ENST00000483882 B4GALNT3Q6L9W6 998 aa18.23■□□□□ 0.51
NR1H3-222ENST00000483882 PI16Q6UXB8 463 aa18.23■□□□□ 0.51
NR1H3-222ENST00000483882 HOOK2Q96ED9 719 aa18.23■□□□□ 0.51
NR1H3-222ENST00000483882 ZFYVE28Q9HCC9 887 aa18.23■□□□□ 0.51
NR1H3-222ENST00000483882 PTPN22Q9Y2R2 807 aa18.23■□□□□ 0.51
NR1H3-222ENST00000483882 SPDYE5A6NIY4 337 aa18.22■□□□□ 0.51
NR1H3-222ENST00000483882 MCAMP43121 646 aa18.22■□□□□ 0.51
NR1H3-222ENST00000483882 NUCB1Q02818 461 aa18.22■□□□□ 0.51
NR1H3-222ENST00000483882 FKBP1CQ5VVH2 108 aa18.22■□□□□ 0.51
NR1H3-222ENST00000483882 ZKSCAN4Q969J2 545 aaPredicted RBP18.22■□□□□ 0.51
NR1H3-222ENST00000483882 GNL3LQ9NVN8 582 aaKnown RBP18.22■□□□□ 0.51
NR1H3-222ENST00000483882 HMG20BQ9P0W2 317 aa18.22■□□□□ 0.51
NR1H3-222ENST00000483882 SNCAIPQ9Y6H5 919 aa18.22■□□□□ 0.51
NR1H3-222ENST00000483882 SALL3Q9BXA9 1300 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms