RNA–Protein interactions for RNA: ENST00000482785.1

SHQ1-208, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 3

Gene SHQ1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-208ENST00000482785 HMGB2P26583 209 aaKnown RBP5.41□□□□□ -1.54
SHQ1-208ENST00000482785 GTF2IP78347 998 aa5.41□□□□□ -1.54
SHQ1-208ENST00000482785 NLRP13Q86W25 1043 aa5.41□□□□□ -1.54
SHQ1-208ENST00000482785 ADAM32Q8TC27 787 aa5.41□□□□□ -1.54
SHQ1-208ENST00000482785 PRDM9Q9NQV7 894 aa5.41□□□□□ -1.54
SHQ1-208ENST00000482785 DOLKQ9UPQ8 538 aa5.41□□□□□ -1.54
SHQ1-208ENST00000482785 ANKRD17O75179 2603 aaKnown RBP5.41□□□□□ -1.54
SHQ1-208ENST00000482785 SPTBN2O15020 2390 aa5.4□□□□□ -1.54
SHQ1-208ENST00000482785 RECKO95980 971 aa5.4□□□□□ -1.54
SHQ1-208ENST00000482785 FKBP4Q02790 459 aaKnown RBP eCLIP5.4□□□□□ -1.54
SHQ1-208ENST00000482785 ZNF211Q13398 564 aaPredicted RBP5.4□□□□□ -1.54
SHQ1-208ENST00000482785 SF3A1Q15459 793 aaKnown RBP5.4□□□□□ -1.54
SHQ1-208ENST00000482785 TRAPPC3LQ5T215 181 aa5.4□□□□□ -1.54
SHQ1-208ENST00000482785 CCDC102BQ68D86 513 aa5.4□□□□□ -1.54
SHQ1-208ENST00000482785 USP50Q70EL3 339 aaPredicted RBP5.4□□□□□ -1.54
SHQ1-208ENST00000482785 PRIMPOLQ96LW4 560 aa5.4□□□□□ -1.54
SHQ1-208ENST00000482785 ARHGAP9Q9BRR9 750 aa5.4□□□□□ -1.54
SHQ1-208ENST00000482785 ZMYND8Q9ULU4 1186 aaPredicted RBP5.4□□□□□ -1.54
SHQ1-208ENST00000482785 KIAA1024Q9UPX6 916 aa5.4□□□□□ -1.54
SHQ1-208ENST00000482785 SLX4Q8IY92 1834 aa5.39□□□□□ -1.55
SHQ1-208ENST00000482785 PTCD1O75127 700 aaKnown RBP5.39□□□□□ -1.55
SHQ1-208ENST00000482785 KRT38O76015 456 aa5.39□□□□□ -1.55
SHQ1-208ENST00000482785 MAGEA10P43363 369 aaPredicted RBP5.39□□□□□ -1.55
SHQ1-208ENST00000482785 SCNN1DP51172 638 aa5.39□□□□□ -1.55
SHQ1-208ENST00000482785 MRPS5P82675 430 aaKnown RBP5.39□□□□□ -1.55
SHQ1-208ENST00000482785 CAP1Q01518 475 aa5.39□□□□□ -1.55
SHQ1-208ENST00000482785 ECM1Q16610 540 aa5.39□□□□□ -1.55
SHQ1-208ENST00000482785 TSGA10IPQ3SY00 556 aa5.39□□□□□ -1.55
SHQ1-208ENST00000482785 MSS51Q4VC12 460 aa5.39□□□□□ -1.55
SHQ1-208ENST00000482785 RNF20Q5VTR2 975 aa5.39□□□□□ -1.55
SHQ1-208ENST00000482785 NYAP1Q6ZVC0 841 aa5.39□□□□□ -1.55
SHQ1-208ENST00000482785 ZBTB33Q86T24 672 aa5.39□□□□□ -1.55
SHQ1-208ENST00000482785 DZIP3Q86Y13 1208 aaKnown RBP5.39□□□□□ -1.55
SHQ1-208ENST00000482785 C2CD5Q86YS7 1000 aa5.39□□□□□ -1.55
SHQ1-208ENST00000482785 RGL4Q8IZJ4 473 aa5.39□□□□□ -1.55
SHQ1-208ENST00000482785 GPC2Q8N158 579 aa5.39□□□□□ -1.55
SHQ1-208ENST00000482785 TRPM4Q8TD43 1214 aa5.39□□□□□ -1.55
SHQ1-208ENST00000482785 GTF3C2Q8WUA4 911 aaPredicted RBP5.39□□□□□ -1.55
SHQ1-208ENST00000482785 UBXN4Q92575 508 aa5.39□□□□□ -1.55
SHQ1-208ENST00000482785 MTRQ99707 1265 aa5.39□□□□□ -1.55
SHQ1-208ENST00000482785 NUDT12Q9BQG2 462 aa5.39□□□□□ -1.55
SHQ1-208ENST00000482785 PLA2G2EQ9NZK7 142 aa5.39□□□□□ -1.55
SHQ1-208ENST00000482785 DMXL1Q9Y485 3027 aa5.39□□□□□ -1.55
SHQ1-208ENST00000482785 DOPEY1Q5JWR5 2465 aa5.38□□□□□ -1.55
SHQ1-208ENST00000482785 COL4A5P29400 1685 aa5.38□□□□□ -1.55
SHQ1-208ENST00000482785 GFRA3O60609 400 aa5.38□□□□□ -1.55
SHQ1-208ENST00000482785 DXOO77932 396 aaKnown RBP5.38□□□□□ -1.55
SHQ1-208ENST00000482785 ARHGAP4P98171 946 aa5.38□□□□□ -1.55
SHQ1-208ENST00000482785 ITPK1Q13572 414 aa5.38□□□□□ -1.55
SHQ1-208ENST00000482785 ST3GAL2Q16842 350 aa5.38□□□□□ -1.55
SHQ1-208ENST00000482785 SLC9C1Q4G0N8 1177 aa5.38□□□□□ -1.55
SHQ1-208ENST00000482785 NAALADL2Q58DX5 795 aa5.38□□□□□ -1.55
SHQ1-208ENST00000482785 OXLD1Q5BKU9 147 aa5.38□□□□□ -1.55
SHQ1-208ENST00000482785 RASAL3Q86YV0 1011 aa5.38□□□□□ -1.55
SHQ1-208ENST00000482785 FAM160A2Q8N612 972 aaPredicted RBP5.38□□□□□ -1.55
SHQ1-208ENST00000482785 TPCN2Q8NHX9 752 aa5.38□□□□□ -1.55
SHQ1-208ENST00000482785 CCDC85AQ96PX6 553 aaPredicted RBP5.38□□□□□ -1.55
SHQ1-208ENST00000482785 SPSB2Q99619 263 aa5.38□□□□□ -1.55
SHQ1-208ENST00000482785 UBE2OQ9C0C9 1292 aaKnown RBP5.38□□□□□ -1.55
SHQ1-208ENST00000482785 TTYH1Q9H313 450 aaPredicted RBP5.38□□□□□ -1.55
SHQ1-208ENST00000482785 GBA2Q9HCG7 927 aaPredicted RBP5.38□□□□□ -1.55
SHQ1-208ENST00000482785 ANO2Q9NQ90 1003 aa5.38□□□□□ -1.55
SHQ1-208ENST00000482785 NLRP2Q9NX02 1062 aa5.38□□□□□ -1.55
SHQ1-208ENST00000482785 THEGQ9P2T0 379 aa5.38□□□□□ -1.55
SHQ1-208ENST00000482785 GJA3Q9Y6H8 435 aa5.38□□□□□ -1.55
SHQ1-208ENST00000482785 CPSF1Q10570 1443 aaKnown RBP5.38□□□□□ -1.55
SHQ1-208ENST00000482785 HELZ2Q9BYK8 2649 aaKnown RBP5.38□□□□□ -1.55
SHQ1-208ENST00000482785 COL2A1P02458 1487 aaPredicted RBP5.38□□□□□ -1.55
SHQ1-208ENST00000482785 BCORQ6W2J9 1755 aa5.37□□□□□ -1.55
SHQ1-208ENST00000482785 SFI1A8K8P3 1242 aa5.37□□□□□ -1.55
SHQ1-208ENST00000482785 PRR33A8MZF0 331 aa5.37□□□□□ -1.55
SHQ1-208ENST00000482785 M0R2N6 131 aa5.37□□□□□ -1.55
SHQ1-208ENST00000482785 FZD9O00144 591 aa5.37□□□□□ -1.55
SHQ1-208ENST00000482785 POLRMTO00411 1230 aaKnown RBP5.37□□□□□ -1.55
SHQ1-208ENST00000482785 WEE1P30291 646 aa5.37□□□□□ -1.55
SHQ1-208ENST00000482785 ID4P47928 161 aa5.37□□□□□ -1.55
SHQ1-208ENST00000482785 MMP16P51512 607 aa5.37□□□□□ -1.55
SHQ1-208ENST00000482785 TAGLNQ01995 201 aaKnown RBP5.37□□□□□ -1.55
SHQ1-208ENST00000482785 USP4Q13107 963 aa5.37□□□□□ -1.55
SHQ1-208ENST00000482785 TSNAXIP1Q2TAA8 658 aa5.37□□□□□ -1.55
SHQ1-208ENST00000482785 SH3BP5LQ7L8J4 393 aa5.37□□□□□ -1.55
SHQ1-208ENST00000482785 NBPF11Q86T75 865 aa5.37□□□□□ -1.55
SHQ1-208ENST00000482785 CD99L2Q8TCZ2 262 aa5.37□□□□□ -1.55
SHQ1-208ENST00000482785 PPM1EQ8WY54 764 aa5.37□□□□□ -1.55
SHQ1-208ENST00000482785 ZNF516Q92618 1163 aa5.37□□□□□ -1.55
SHQ1-208ENST00000482785 PRAM1Q96QH2 718 aa5.37□□□□□ -1.55
SHQ1-208ENST00000482785 UIMC1Q96RL1 719 aa5.37□□□□□ -1.55
SHQ1-208ENST00000482785 HINFPQ9BQA5 517 aa5.37□□□□□ -1.55
SHQ1-208ENST00000482785 PCDHGA11Q9Y5H2 935 aa5.37□□□□□ -1.55
SHQ1-208ENST00000482785 DNMT3AQ9Y6K1 912 aaPredicted RBP5.37□□□□□ -1.55
SHQ1-208ENST00000482785 POLR3AO14802 1390 aaPredicted RBP5.37□□□□□ -1.55
SHQ1-208ENST00000482785 COL15A1P39059 1388 aa5.37□□□□□ -1.55
SHQ1-208ENST00000482785 ZPR1O75312 459 aa5.36□□□□□ -1.55
SHQ1-208ENST00000482785 ADH1BP00325 375 aa5.36□□□□□ -1.55
SHQ1-208ENST00000482785 BMP1P13497 986 aa5.36□□□□□ -1.55
SHQ1-208ENST00000482785 SYN1P17600 705 aa5.36□□□□□ -1.55
SHQ1-208ENST00000482785 RFC4P35249 363 aa5.36□□□□□ -1.55
SHQ1-208ENST00000482785 ITGAEP38570 1179 aa5.36□□□□□ -1.55
SHQ1-208ENST00000482785 FGD1P98174 961 aa5.36□□□□□ -1.55
SHQ1-208ENST00000482785 ARHGEF25Q86VW2 580 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms