RNA–Protein interactions for RNA: ENST00000482098.1

LINC00888-203, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 794 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-203ENST00000482098 NOS2P35228 1153 aa9.99□□□□□ -0.81
LINC00888-203ENST00000482098 TGFB2P61812 414 aa9.99□□□□□ -0.81
LINC00888-203ENST00000482098 C16orf71Q8IYS4 520 aaPredicted RBP9.99□□□□□ -0.81
LINC00888-203ENST00000482098 CCDC116Q8IYX3 515 aa9.99□□□□□ -0.81
LINC00888-203ENST00000482098 OTUD5Q96G74 571 aa9.99□□□□□ -0.81
LINC00888-203ENST00000482098 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.99□□□□□ -0.81
LINC00888-203ENST00000482098 PIF1Q9H611 641 aa9.99□□□□□ -0.81
LINC00888-203ENST00000482098 SBNO2Q9Y2G9 1366 aa9.99□□□□□ -0.81
LINC00888-203ENST00000482098 CLSTN1O94985 981 aa9.98□□□□□ -0.81
LINC00888-203ENST00000482098 SRA1Q9HD15 236 aaKnown RBP9.98□□□□□ -0.81
LINC00888-203ENST00000482098 NMRK2Q9NPI5 230 aa9.98□□□□□ -0.81
LINC00888-203ENST00000482098 HCN4Q9Y3Q4 1203 aa9.98□□□□□ -0.81
LINC00888-203ENST00000482098 PLEKHG2Q9H7P9 1386 aa9.98□□□□□ -0.81
LINC00888-203ENST00000482098 WDR90Q96KV7 1748 aa9.97□□□□□ -0.81
LINC00888-203ENST00000482098 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.97□□□□□ -0.81
LINC00888-203ENST00000482098 PPP1R26Q5T8A7 1209 aaPredicted RBP9.97□□□□□ -0.81
LINC00888-203ENST00000482098 EGFLAMQ63HQ2 1017 aa9.97□□□□□ -0.81
LINC00888-203ENST00000482098 MCF2L2Q86YR7 1114 aa9.97□□□□□ -0.81
LINC00888-203ENST00000482098 GPR152Q8TDT2 470 aa9.97□□□□□ -0.81
LINC00888-203ENST00000482098 SMARCC1Q92922 1105 aaPredicted RBP9.97□□□□□ -0.81
LINC00888-203ENST00000482098 CNKSR1Q969H4 720 aa9.97□□□□□ -0.81
LINC00888-203ENST00000482098 ESYT1Q9BSJ8 1104 aa9.97□□□□□ -0.81
LINC00888-203ENST00000482098 C12orf49Q9H741 205 aa9.97□□□□□ -0.81
LINC00888-203ENST00000482098 PGPEP1Q9NXJ5 209 aa9.97□□□□□ -0.81
LINC00888-203ENST00000482098 KLK14Q9P0G3 267 aa9.97□□□□□ -0.81
LINC00888-203ENST00000482098 KDM2BQ8NHM5 1336 aa9.97□□□□□ -0.81
LINC00888-203ENST00000482098 USP54Q70EL1 1684 aa9.96□□□□□ -0.81
LINC00888-203ENST00000482098 POTEB3A0JP26 581 aa9.96□□□□□ -0.82
LINC00888-203ENST00000482098 IL2RAP01589 272 aa9.96□□□□□ -0.82
LINC00888-203ENST00000482098 GRM5P41594 1212 aa9.96□□□□□ -0.82
LINC00888-203ENST00000482098 TAF1CQ15572 869 aaPredicted RBP9.96□□□□□ -0.82
LINC00888-203ENST00000482098 NFE2L2Q16236 605 aa9.96□□□□□ -0.82
LINC00888-203ENST00000482098 POTEBQ6S5H4 581 aa9.96□□□□□ -0.82
LINC00888-203ENST00000482098 TREML1Q86YW5 311 aa9.96□□□□□ -0.82
LINC00888-203ENST00000482098 NKX2-3Q8TAU0 364 aa9.96□□□□□ -0.82
LINC00888-203ENST00000482098 USP3Q9Y6I4 520 aa9.96□□□□□ -0.82
LINC00888-203ENST00000482098 OPLAHO14841 1288 aa9.95□□□□□ -0.82
LINC00888-203ENST00000482098 FGRP09769 529 aa9.95□□□□□ -0.82
LINC00888-203ENST00000482098 GJA8P48165 433 aa9.95□□□□□ -0.82
LINC00888-203ENST00000482098 SKOR1P84550 965 aa9.95□□□□□ -0.82
LINC00888-203ENST00000482098 SMC1BQ8NDV3 1235 aa9.95□□□□□ -0.82
LINC00888-203ENST00000482098 KCTD12Q96CX2 325 aaKnown RBP9.95□□□□□ -0.82
LINC00888-203ENST00000482098 CWC22Q9HCG8 908 aaKnown RBP9.95□□□□□ -0.82
LINC00888-203ENST00000482098 ROCK2O75116 1388 aaKnown RBP9.95□□□□□ -0.82
LINC00888-203ENST00000482098 PALLDQ8WX93 1383 aa9.95□□□□□ -0.82
LINC00888-203ENST00000482098 HSPA1AP0DMV8 641 aaKnown RBP9.94□□□□□ -0.82
LINC00888-203ENST00000482098 HSPA1BP0DMV9 641 aaKnown RBP9.94□□□□□ -0.82
LINC00888-203ENST00000482098 ATF4P18848 351 aaPredicted RBP9.94□□□□□ -0.82
LINC00888-203ENST00000482098 HTRA3P83110 453 aa9.94□□□□□ -0.82
LINC00888-203ENST00000482098 NR5A1Q13285 461 aa9.94□□□□□ -0.82
LINC00888-203ENST00000482098 BMS1Q14692 1282 aaKnown RBP9.94□□□□□ -0.82
LINC00888-203ENST00000482098 ZNF746Q6NUN9 644 aaPredicted RBP9.94□□□□□ -0.82
LINC00888-203ENST00000482098 ARHGAP27Q6ZUM4 889 aa9.94□□□□□ -0.82
LINC00888-203ENST00000482098 NME9Q86XW9 330 aa9.94□□□□□ -0.82
LINC00888-203ENST00000482098 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.94□□□□□ -0.82
LINC00888-203ENST00000482098 CKAP2LQ8IYA6 745 aa9.94□□□□□ -0.82
LINC00888-203ENST00000482098 MPNDQ8N594 471 aa9.94□□□□□ -0.82
LINC00888-203ENST00000482098 POLR3GLQ9BT43 218 aa9.94□□□□□ -0.82
LINC00888-203ENST00000482098 PHACTR1Q9C0D0 580 aa9.94□□□□□ -0.82
LINC00888-203ENST00000482098 FAM8A1Q9UBU6 413 aa9.94□□□□□ -0.82
LINC00888-203ENST00000482098 FAM208AQ9UK61 1670 aaKnown RBP9.93□□□□□ -0.82
LINC00888-203ENST00000482098 PXDNLA1KZ92 1463 aa9.93□□□□□ -0.82
LINC00888-203ENST00000482098 ADD1P35611 737 aaKnown RBP9.93□□□□□ -0.82
LINC00888-203ENST00000482098 SH3PXD2AQ5TCZ1 1133 aa9.93□□□□□ -0.82
LINC00888-203ENST00000482098 GPRASP2Q96D09 838 aa9.93□□□□□ -0.82
LINC00888-203ENST00000482098 MRFAP1L1Q96HT8 127 aa9.93□□□□□ -0.82
LINC00888-203ENST00000482098 GGNBP2Q9H3C7 697 aa9.93□□□□□ -0.82
LINC00888-203ENST00000482098 BCS1LQ9Y276 419 aa9.93□□□□□ -0.82
LINC00888-203ENST00000482098 EDC4Q6P2E9 1401 aaKnown RBP9.92□□□□□ -0.82
LINC00888-203ENST00000482098 ST13P50502 369 aaKnown RBP9.92□□□□□ -0.82
LINC00888-203ENST00000482098 PAK2Q13177 524 aa9.92□□□□□ -0.82
LINC00888-203ENST00000482098 HIF1AQ16665 826 aa9.92□□□□□ -0.82
LINC00888-203ENST00000482098 C1orf53Q5VUE5 145 aa9.92□□□□□ -0.82
LINC00888-203ENST00000482098 HDGFL2Q7Z4V5 671 aaPredicted RBP9.92□□□□□ -0.82
LINC00888-203ENST00000482098 NLGN1Q8N2Q7 840 aa9.92□□□□□ -0.82
LINC00888-203ENST00000482098 ZDHHC1Q8WTX9 485 aa9.92□□□□□ -0.82
LINC00888-203ENST00000482098 C5P01031 1676 aa9.92□□□□□ -0.82
LINC00888-203ENST00000482098 DOT1LQ8TEK3 1739 aa9.91□□□□□ -0.82
LINC00888-203ENST00000482098 PCDH11XQ9BZA7 1347 aa9.91□□□□□ -0.82
LINC00888-203ENST00000482098 PCDH11YQ9BZA8 1340 aa9.91□□□□□ -0.82
LINC00888-203ENST00000482098 PPEF1O14829 653 aaPredicted RBP9.91□□□□□ -0.82
LINC00888-203ENST00000482098 ADH1CP00326 375 aa9.91□□□□□ -0.82
LINC00888-203ENST00000482098 MMP10P09238 476 aa9.91□□□□□ -0.82
LINC00888-203ENST00000482098 IBSPP21815 317 aaPredicted RBP9.91□□□□□ -0.82
LINC00888-203ENST00000482098 GTF2E1P29083 439 aaPredicted RBP9.91□□□□□ -0.82
LINC00888-203ENST00000482098 HOXC9P31274 260 aa9.91□□□□□ -0.82
LINC00888-203ENST00000482098 CLN3Q13286 438 aa9.91□□□□□ -0.82
LINC00888-203ENST00000482098 NBPF6Q5VWK0 638 aa9.91□□□□□ -0.82
LINC00888-203ENST00000482098 AMIGO3Q86WK7 504 aa9.91□□□□□ -0.82
LINC00888-203ENST00000482098 RAPGEF4Q8WZA2 1011 aa9.91□□□□□ -0.82
LINC00888-203ENST00000482098 SPACA7Q96KW9 195 aa9.91□□□□□ -0.82
LINC00888-203ENST00000482098 NBPF4Q96M43 638 aa9.91□□□□□ -0.82
LINC00888-203ENST00000482098 SRCIN1Q9C0H9 1055 aa9.91□□□□□ -0.82
LINC00888-203ENST00000482098 MEGF6O75095 1541 aa9.91□□□□□ -0.82
LINC00888-203ENST00000482098 RC3H1Q5TC82 1133 aaKnown RBP9.9□□□□□ -0.82
LINC00888-203ENST00000482098 MEI1Q5TIA1 1274 aa9.9□□□□□ -0.82
LINC00888-203ENST00000482098 CCDC74AQ96AQ1 378 aa9.9□□□□□ -0.82
LINC00888-203ENST00000482098 LTV1Q96GA3 475 aaPredicted RBP9.9□□□□□ -0.82
LINC00888-203ENST00000482098 NIFKQ9BYG3 293 aaKnown RBP9.9□□□□□ -0.82
LINC00888-203ENST00000482098 OSBPL7Q9BZF2 842 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms